Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,601,251 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,601,2510AT100.0% 438.0 / NA 185intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (86/99);  total (86/99)
*CP0425831,601,2520GC98.9% 428.0 / NA 185intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (85/98);  minor base A (1/1);  total (86/99)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,601,2530TA99.5% 432.9 / NA 185intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (84/99);  total (86/99)
Fisher's exact test for biased strand distribution p-value = 4.62e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 185 total aligned reads displayed.

ACAAATGCGCGAAGCGATGCCTAGCACGCTCAGTTTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTAGTATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTCC  >  CP042583/1600983‑1601528
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                    
acaAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTgccgcc                                                                                                                                                                                                                                                                    <  2:1582129/289‑1 (MQ=255)
 caAATGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCCGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCt                                                                                                                                                                                                                                                                   >  2:1492489/1‑289 (MQ=255)
    aTGCGCGAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGt                                                                                                                                                                                                                                                                >  1:1382361/1‑289 (MQ=255)
          gAAGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCt                                                                                                                                                                                                                                                           <  1:533717/288‑1 (MQ=255)
            aGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATTTTCAGGAAGCCAGTTCAATGTTGCCGGTTCCCTCCTTGTTTgtgtac                                                                                                                                                                                                                                                        >  2:1938027/1‑284 (MQ=255)
            aGCGATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGAc                                                                                                                                                                                                                                                        >  1:1131862/1‑289 (MQ=255)
               gATGCCTTGGACGCTTTCATTTGATGATTTTCTTCCCCCCTGTCAGGGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                                                                      <  2:1978883/288‑1 (MQ=255)
               gATGCCTTCGACGCTCTCATTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                                                                      <  2:541940/288‑1 (MQ=255)
                    cttcgacgctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGc                                                                                                                                                                                                                                                <  2:229877/275‑1 (MQ=255)
                        gacgctctcatttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTTCCTGTTTCCGGCTTGTTTGCTGACGGTAATGcacc                                                                                                                                                                                                                                             >  2:267444/11‑288 (MQ=255)
                                 atttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTg                                                                                                                                                                                                                                   <  1:405821/288‑1 (MQ=255)
                                 atttGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTg                                                                                                                                                                                                                                   <  1:1854134/288‑1 (MQ=255)
                                      atgatTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGAGGGTAATGCACCACAGCGGGAgctggc                                                                                                                                                                                                                              >  2:588555/1‑288 (MQ=255)
                                           tttCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTACTGCCCCACAGCGGGTGATGGGTGTc                                                                                                                                                                                                                          >  2:1483117/1‑288 (MQ=255)
                                                      cTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCt                                                                                                                                                                                                              <  1:630169/289‑1 (MQ=255)
                                                        gTCGGCGCCCGTTGCTCCGCAGCATTCGCGTTACTACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAAACGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAATATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTgg                                                                                                                                                                                                            <  2:751758/289‑1 (MQ=255)
                                                               cccGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGGGGCGTGAAGAAGGGTTCTGGATTGAGCGCGACACTGGAGATGCATTTCCATTGGGTAGTACCGCCGAGCATTTAAGGGGCCTGTTTTATATTCAGGAAGCCAGTTCTATGATGCCTGTTTCCGCCTTGTTTGCTGACGGTAATGCACCCCAGCGGGTGCTGGTTGTCCTTGCCGCGCCTGGCTCaaaa                                                                                                                                                                                                     >  2:727240/1‑289 (MQ=255)
                                                                                 tCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAGATTTCcgcg                                                                                                                                                                                   <  1:1483117/289‑1 (MQ=255)
                                                                                     gTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGa                                                                                                                                                                               <  1:1810669/289‑1 (MQ=255)
                                                                                          tACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAAt                                                                                                                                                                          <  1:477917/289‑1 (MQ=255)
                                                                                             gCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACgg                                                                                                                                                                                                                                                      <  2:74602/210‑1 (MQ=255)
                                                                                              cTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACg                                                                                                                                                                      >  1:887939/1‑289 (MQ=255)
                                                                                               tGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAAt                                                                                                                                                                          <  2:1556766/284‑1 (MQ=255)
                                                                                                    aTCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAgggg                                                                                                                                                                <  2:1687760/289‑1 (MQ=255)
                                                                                                          gTTGCTGATGTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATcc                                                                                                                                                          <  1:284331/289‑1 (MQ=255)
                                                                                                                gATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCa                                                                                                                                                    >  1:1404523/1‑289 (MQ=255)
                                                                                                                                ccGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAg                                                                                                                                   <  1:1917577/289‑1 (MQ=255)
                                                                                                                                ccGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAg                                                                                                                                   <  1:519365/289‑1 (MQ=255)
                                                                                                                                        tATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTaa                                                                                                                           <  2:1404523/289‑1 (MQ=255)
                                                                                                                                           ggCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAg                                                                                                                        <  1:1531680/289‑1 (MQ=255)
                                                                                                                                            gcgggACGTTTGCGGCAATACCGTGGTGGAGAGGAGGTTTCTGGAGTGAACGCGACAGTGAAGATGCATTGCGATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTAAATGTTGCCTGTTGCCGCGTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAg                                                                                                                        <  2:1301783/285‑1 (MQ=255)
                                                                                                                                                gACGCTTACGCTAATTCCGTGGTGTGAAGACGGTTTCTGGACTGAAAGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGCGCATTTAAGGGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCGTTGTTTGCTGACGGCAATGTACCAAAGCCGGTGATGGGTGTCGCGGCCGCGCCTGGCACCAAAACGACGCAAATTTCCGCGACGATGAATAACGGAGGGCGAACCCATGCCAATGAGTTCTCC‑GCCAGTCGGGAAAAAGTGTTa                                                                                                                   >  2:122917/1‑289 (MQ=255)
                                                                                                                                                gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCCAATTGCCGCGCGGATGGATAACGACGGGGCAATCCTCGCCACTGAGTGTTCG‑GCGACTCGGGCaaaatgggg                                                                                                                    >  2:449482/1‑283 (MQ=255)
                                                                                                                                                gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGtt                                                                                                                    >  1:981614/1‑288 (MQ=255)
                                                                                                                                                gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGtt                                                                                                                    >  1:573778/1‑288 (MQ=255)
                                                                                                                                                gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCCCCAAAACGACGCAAATTTCCGCGCCGCTGAATAACGAAGGGGCAACCCTAGCCAAGGCGTTTTCCACCCGGTCGGGTaaagggtt                                                                                                                     >  2:858767/1‑283 (MQ=255)
                                                                                                                                                gACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTCACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCCCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTGTCC‑GCCAGCAGGGTAAAAGTGtt                                                                                                                    >  1:981634/1‑288 (MQ=255)
                                                                                                                                                  cGCTTACGGCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTAc                                                                                                                  <  2:981614/288‑1 (MQ=255)
                                                                                                                                                     ttACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATg                                                                                                               <  2:1440683/288‑1 (MQ=255)
                                                                                                                                                       gaaccgagatcggggtgTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCa                                                                                                            <  1:1141054/276‑1 (MQ=255)
                                                                                                                                                            aaTTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCACGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATc                                                                                                       <  1:1758323/289‑1 (MQ=255)
                                                                                                                                                             agtcctgggtgTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCa                                                                                                      <  2:479204/282‑1 (MQ=255)
                                                                                                                                                             aTTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTCTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcg                                                                                                                                                                                     >  2:1561120/1‑211 (MQ=255)
                                                                                                                                                             aTTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTCTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcg                                                                                                                                                                                     <  1:1561120/211‑1 (MQ=255)
                                                                                                                                                                 cGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCg                                                                                                  <  1:1523389/289‑1 (MQ=255)
                                                                                                                                                                   tggtgTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                                                                   >  1:719630/1‑286 (MQ=255)
                                                                                                                                                                   tggtgTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                                                                   >  2:1359392/1‑286 (MQ=255)
                                                                                                                                                                   tggtgTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGcg                                                                                                >  1:146461/1‑288 (MQ=255)
                                                                                                                                                                    ggtgGGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCt                                                                                                <  2:1022419/288‑1 (MQ=255)
                                                                                                                                                                       gtgAAGGAGGTATCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGGGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCGAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTgg                                                                                            <  2:1791829/289‑1 (MQ=255)
                                                                                                                                                                       gtgAAGAAGTTTTCATGATTGGACACGAGAATATATATGCATAGTCATTGGGTGGTACCTGCGAGCAGTTAAGTGGCCTTTTTTATATTCAGAAAGCCAGTTCAATGGTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCAGCGCCTGGCTCCAAATAGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGGAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTgg                                                                                            <  2:802842/289‑1 (MQ=255)
                                                                                                                                                                        tgAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGATTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGATGGGGCAATCCTTGCCACTGCGTTTTCC‑GCCAGTAGGGTAAAAGTGTTACATGCCAAAATCCGCCGTCGTGGt                                                                                           >  2:781276/1‑289 (MQ=255)
                                                                                                                                                                         gaagaaGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGt                                                                                           <  1:1207612/288‑1 (MQ=255)
                                                                                                                                                                         gaagaaGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGt                                                                                           <  1:1577960/288‑1 (MQ=255)
                                                                                                                                                                           agaagGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTAt                                                                                         <  1:1971178/288‑1 (MQ=255)
                                                                                                                                                                                gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGt                                                                                                                             <  2:1956767/247‑1 (MQ=255)
                                                                                                                                                                                gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGt                                                                                                                             >  1:1956767/1‑247 (MQ=255)
                                                                                                                                                                                gTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCtgtg                                                                                             <  1:1362261/279‑1 (MQ=255)
                                                                                                                                                                                  ttCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                                                                   <  2:501734/271‑1 (MQ=255)
                                                                                                                                                                                  ttCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                                                                   >  1:501734/1‑271 (MQ=255)
                                                                                                                                                                                        aTTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTgcg                                                                            <  1:475451/288‑1 (MQ=255)
                                                                                                                                                                                          tGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGGGTTACATGCCAATATCAGCCGCTGTGGTAGCAGTAATTTTGCGCt                                                                          >  2:1874314/1‑288 (MQ=255)
                                                                                                                                                                                          tGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGGGATGGATGTCGCTGCCGCGCCTGGCTCCAACACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGGTTTCAATTCCAATATCAGCCGCTCTGGTATCATTCATGTTTCGCTc                                                                         >  2:1135037/1‑289 (MQ=255)
                                                                                                                                                                                              cgcgACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTgcg                                                                            <  2:1828289/282‑1 (MQ=255)
                                                                                                                                                                                                 gACAATGAAGATGCATTTCCGTTGGGTAGTACCGCCGAGCATTTAAGTGCCCTGTTTTATCTTCAGGAAGCCAGTTCAATGTTGCTTGTTGCCGCCTTTTTTGCTGACGGTAATGGCCCACGGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGcc                                                                                                   <  2:559797/256‑1 (MQ=255)
                                                                                                                                                                                                     aTGAAGATGCATTTCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATTCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGa                                                              <  1:243861/289‑1 (MQ=255)
                                                                                                                                                                                                      tGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGAt                                                             >  1:731132/1‑289 (MQ=255)
                                                                                                                                                                                                           aTGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTCGCTGACGGTAATCCACCACAGCGGGCGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTAt                                                                                         >  1:559797/1‑256 (MQ=255)
                                                                                                                                                                                                            tGCATTTCCAGTGGGTGGTACCGCCGAGCCTTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCcgc                                                       <  2:371076/289‑1 (MQ=255)
                                                                                                                                                                                                            tGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCcgc                                                       <  1:229987/289‑1 (MQ=255)
                                                                                                                                                                                                               aTTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                                                                     >  1:306347/1‑177 (MQ=255)
                                                                                                                                                                                                               aTTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGa                                                                                                                                                                     <  2:306347/177‑1 (MQ=255)
                                                                                                                                                                                                                ttGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCgtgg                                                   >  1:1264578/1‑288 (MQ=255)
                                                                                                                                                                                                                     aTTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGt                                              >  1:1586642/1‑289 (MQ=255)
                                                                                                                                                                                                                      ttGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACCGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGGAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTTCGCTCACACATTTTTATGGCCCCTTGTTTGGt                                              >  1:1678831/1‑288 (MQ=255)
                                                                                                                                                                                                                        gggTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCg                                           >  1:1081418/1‑289 (MQ=255)
                                                                                                                                                                                                                           tagtaCCGCCGTGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGc                                         <  1:781276/288‑1 (MQ=255)
                                                                                                                                                                                                                           tagtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGc                                         <  2:1382361/288‑1 (MQ=255)
                                                                                                                                                                                                                            agtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAg                                       <  1:858767/289‑1 (MQ=255)
                                                                                                                                                                                                                            agtaCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAg                                       <  1:798818/289‑1 (MQ=255)
                                                                                                                                                                                                                              taCCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTa                                                                                                                   <  2:502464/211‑1 (MQ=255)
                                                                                                                                                                                                                                ccgccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGcc                                   >  1:656216/1‑289 (MQ=255)
                                                                                                                                                                                                                                   ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGt                                                                                           >  1:1429873/1‑230 (MQ=255)
                                                                                                                                                                                                                                   ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGc                                         <  2:1524285/280‑1 (MQ=255)
                                                                                                                                                                                                                                   ccgAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGa                                >  2:1251566/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCTATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCCCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGaaa                              >  2:231832/1‑289 (MQ=255)
                                                                                                                                                                                                                                       gCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAAt                             <  1:588555/288‑1 (MQ=255)
                                                                                                                                                                                                                                                 ggCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCa                  <  2:887939/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATc                                                                                                       >  1:1092147/1‑203 (MQ=255)
                                                                                                                                                                                                                                                  gCCTGTTTTATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGTCCGCGTGTTTGGTGCGGCATTGCCAGAAATGTTCGATGCCAt                 >  2:665979/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       ttttATATTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTca                                                                        <  1:124169/229‑1 (MQ=255)
                                                                                                                                                                                                                                                            tatTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTgcg                                                                            >  2:1300162/1‑220 (MQ=255)
                                                                                                                                                                                                                                                            tatTCAGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTgcg                                                                            <  1:1300162/220‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCcgcg                                                                                                                                                                                   >  1:555043/1‑113 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTca                                                                        >  2:1160121/1‑219 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTca                                                                        <  1:1160121/219‑1 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTc   >  1:813227/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTc   >  1:735716/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 aGGAAGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTc   >  1:166466/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                    aaGCCAGTTCAATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTcc  <  1:515105/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                            |||                                                                                                                                                                                                                                                                                    
ACAAATGCGCGAAGCGATGCCTAGCACGCTCAGTTTTGATGATTTTCTTGCCGCCTGTCAGCGCCCGTTGCGCCGCAGCATTCGCGTTAATACGCTGAAAATCTCCGTTGCTGATTTCCTGCAATTAACCGCTCCTTATGGCTGGACGCTTACGCCAATTCCGTGGTGTGAAGAAGGTTTCTGGATTGAACGCGACAATGAAGATGCATTGCCATTGGGTAGTACCGCCGAGCATTTAAGTGGCCTGTTTTATATTCAGGAAGCCAGTAGTATGTTGCCTGTTGCCGCCTTGTTTGCTGACGGTAATGCACCACAGCGGGTGATGGATGTCGCTGCCGCGCCTGGCTCCAAAACGACGCAAATTTCCGCGCGGATGAATAACGAAGGGGCAATCCTTGCCAATGAGTTTTCC‑GCCAGTCGGGTAAAAGTGTTACATGCCAATATCAGCCGCTGTGGTATCAGTAATGTTGCGCTCACACATTTTGATGGCCGCGTGTTTGGTGCGGCAGTGCCAGAAATGTTCGATGCCATTTTGCTGGACGCTCC  >  CP042583/1600983‑1601528

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A