Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,602,559 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,602,5590AT99.6% 568.9 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (109/131);  total (109/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,602,5600GC100.0% 565.4 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (109/132);  total (109/132)
*CP0425831,602,5610CG99.6% 565.2 / NA 241intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (107/132);  total (109/132)
Fisher's exact test for biased strand distribution p-value = 4.50e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 241 total aligned reads displayed.

GCATCAACCGATTGGTTTAGCCAAACGGATTGGTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCG  >  CP042583/1602279‑1602831
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                              
    cAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATc                                                                                                                                                                                                                                                                      <  1:755043/289‑1 (MQ=255)
     aaCCGATTGGTTGAGCCAAACGGATTGGTTCGGGATTGAAAAACAGCTATCCGCGTGGACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCACACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGAt                                                                                                                                                                                                                                                                       <  2:214584/287‑1 (MQ=255)
      aCCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTTCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCCCGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGAGAAATACACGGTGAATCCCCAGGTGATGGa                                                                                                                                                                                                                                                                    >  2:1004789/1‑289 (MQ=255)
      aCCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGa                                                                                                                                                                                                                                                                    >  1:881053/1‑289 (MQ=255)
          aTTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACg                                                                                                                                                                                                                                                                 <  2:618811/288‑1 (MQ=255)
           ttGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGtt                                                                                                                                                                                                                                                               >  1:616652/1‑289 (MQ=255)
               tttAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTaaa                                                                                                                                                                                                                                                            >  1:214584/1‑287 (MQ=255)
                  aGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCAtt                                                                                                                                                                                                                                                        <  1:427084/289‑1 (MQ=255)
                  aGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCAtt                                                                                                                                                                                                                                                        <  2:1125792/289‑1 (MQ=255)
                        aCGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAACTGGAGAGCAAGAAGATGAAAACCAG‑TGTGCGTATAGGCGCGTTTGAAATCGACGACGGCGATTTACACGTTGAATCGTCAGATGTTCGAACACTAACCAtatctttt                                                                                                                                                                                                                                                  >  2:1071698/1‑282 (MQ=255)
                        aCGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGt                                                                                                                                                                                                                                                  <  2:1210197/289‑1 (MQ=255)
                                 ttcgcGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGa                                                                                                                                                                                                                                          >  1:1901299/5‑288 (MQ=255)
                                  tcgcGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTTACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGAc                                                                                                                                                                                                                                         <  1:1137093/285‑1 (MQ=255)
                                    gcGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAAAGTTAACCATTCCTTGTAAATCTGAccc                                                                                                                                                                                                                                       >  2:854156/2‑288 (MQ=255)
                                      gATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGACAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGAAGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGa                                                                                                                                                                                                                                    >  1:1637983/1‑289 (MQ=255)
                                           aaaaaCAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTtat                                                                                                                                                                                                                               >  1:799001/1‑289 (MQ=255)
                                                 cgCTATACGGGTGAACGGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACCGCGCACAAAAAAAGCGCACTTTTTGACTGGGACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGc                                                                                                                                                                                                                         <  2:1723465/288‑1 (MQ=255)
                                                  gCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTGCCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCa                                                                                                                                                                                                                        >  1:1323947/1‑289 (MQ=255)
                                                     aTCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAt                                                                                                                                                                                                                                   >  1:1287648/1‑275 (MQ=255)
                                                     aTCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAt                                                                                                                                                                                                                                   <  2:1287648/275‑1 (MQ=255)
                                                       ccGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTgg                                                                                                                                                                                                                   <  1:93706/289‑1 (MQ=255)
                                                       ccGCGTGAACTGGGGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACAGTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTgg                                                                                                                                                                                                                   <  2:10487/289‑1 (MQ=255)
                                                          cgTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGAt                                                                                                                                                                                                                 >  1:1072881/1‑288 (MQ=255)
                                                           gTGAACTGGTGGGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCAAAAAAAAAGCGCACTTTTTGACTGGCACATTCTGCTGCCTCAACTAGGCAGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCGAAATGGAGAGCACGAAGACGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGTCGGCGAATTACACGGTGAATCGCAAGGGGATCGAACGTTAACCATCACTTGTAAATATGAACCCGATTTATGTTCTCAACTGGCTg                                                                                                                                                                                                                >  2:80269/1‑288 (MQ=255)
                                                           gTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATg                                                                                                                                                                                                                >  2:1230295/1‑288 (MQ=255)
                                                                cTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTggg                                                                                                                                                                                                          <  1:298187/289‑1 (MQ=255)
                                                                          aTGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGAt                                                                                                                                                                                                                                                                       <  2:1794072/218‑1 (MQ=255)
                                                                          aTGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGAt                                                                                                                                                                                                                                                                       >  1:1794072/1‑218 (MQ=255)
                                                                             ggAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCa                                                                                                                                                                                              <  2:881053/288‑1 (MQ=255)
                                                                             ggAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAg                                                                                                                                                                                             >  1:1566556/1‑289 (MQ=255)
                                                                              gAAACTTTTTAACGGTAACGCCTGACAGCGGAAAAAAAAAGCGCACTTTTTGACTGGCAAATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTATTGAAATCGACGACTGCTAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAg                                                                                                                                                                                             <  2:1500172/288‑1 (MQ=255)
                                                                                  cTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATcc                                                                                                                                                                                        <  1:646931/289‑1 (MQ=255)
                                                                                       tACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATccctgcc                                                                                                                                                                                   <  1:80959/289‑1 (MQ=255)
                                                                                             tAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCt                                                                                                                                                                              <  2:1543337/288‑1 (MQ=255)
                                                                                              aaCGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTaa                                                                                                                                                                            <  1:1003916/289‑1 (MQ=255)
                                                                                               aCGCATGACAGCGGACAAAAAAAGCGCACTTTTTGACTTGCACCTTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTaa                                                                                                                                                                            <  2:986537/288‑1 (MQ=255)
                                                                                                          cgcACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAacac                                                                                                                                                                 >  1:459643/1‑288 (MQ=255)
                                                                                                          cgcAAAAAACAAACGTACTGTATGACAGAAACCTTCGCCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGATCGGACGTACCACAATCGGAAGCTAAATGGAAAGCACGACGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  2:91883/289‑1 (MQ=255)
                                                                                                           gcACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  2:1754770/288‑1 (MQ=255)
                                                                                                           gcACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  1:1230295/288‑1 (MQ=255)
                                                                                                           gcACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  2:300238/288‑1 (MQ=255)
                                                                                                           gcACAAAAAAAGCGCACTTTTTGACTGGCACATACGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  1:863574/288‑1 (MQ=255)
                                                                                                             acaAAAAAAGCGCACGTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTg                                                                                                                                                             <  1:398744/289‑1 (MQ=255)
                                                                                                                aaaaaaGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTcc                                                                                                                                                          <  1:1403530/289‑1 (MQ=255)
                                                                                                                 aaaaaGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCt                                                                                                                                                         <  1:288030/289‑1 (MQ=255)
                                                                                                                         cACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGAAGCCTGGGATGCTGAAACCAGTATCCCTGCCCTTCTAAATGGCCAACACCCTGTCCTTTACCGt                                                                                                                                                  >  2:114508/1‑288 (MQ=255)
                                                                                                                               ttGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGtt                                                                                                                                           <  1:351244/289‑1 (MQ=255)
                                                                                                                                      gCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCt                                                                                                                                                                                                                                            <  1:1843521/185‑1 (MQ=255)
                                                                                                                                      gCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCt                                                                                                                                                                                                                                            >  2:1843521/1‑185 (MQ=255)
                                                                                                                                        acaTTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATcaa                                                                                                                                   <  2:346330/288‑1 (MQ=255)
                                                                                                                                         caTTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  1:1118431/258‑1 (MQ=255)
                                                                                                                                             cGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGGGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                                                                                             <  2:738589/289‑1 (MQ=255)
                                                                                                                                                cTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTg                                                                                                                                                                                                                    >  1:1175662/1‑199 (MQ=255)
                                                                                                                                                cTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTg                                                                                                                                                                                                                    <  2:1175662/199‑1 (MQ=255)
                                                                                                                                                cTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCt                                                                                                                                                         >  2:1263832/1‑258 (MQ=255)
                                                                                                                                                cTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCt                                                                                                                                                         <  1:1263832/258‑1 (MQ=255)
                                                                                                                                                   ccTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGACTGGGATGCTGa                                                                                                                                                                                                   >  2:434546/1‑213 (MQ=255)
                                                                                                                                                        aCTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGc                                                                                                                                                                       >  2:191791/1‑236 (MQ=255)
                                                                                                                                                          tAGGCTGCAAAATAGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTa                                                                                                                <  2:316446/289‑1 (MQ=255)
                                                                                                                                                             gCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGa                                                                                                                                                                     <  2:1738971/233‑1 (MQ=255)
                                                                                                                                                             gCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGa                                                                                                                                                                     >  1:1738971/1‑233 (MQ=255)
                                                                                                                                                             gCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCATTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGc                                                                                                             >  2:712232/1‑289 (MQ=255)
                                                                                                                                                               tGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCg                                                                                                            >  2:56574/1‑288 (MQ=255)
                                                                                                                                                                      tGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCt                                                                                                    <  1:1537104/289‑1 (MQ=255)
                                                                                                                                                                           cGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAg                                                                                                                                                                                             <  1:176017/195‑1 (MQ=255)
                                                                                                                                                                           cGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATcc                                                                                               >  1:1515118/1‑289 (MQ=255)
                                                                                                                                                                                   cTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCt                                                                                                                             >  2:1102875/1‑251 (MQ=255)
                                                                                                                                                                                     ggTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAAc                                                                                      >  1:705885/1‑288 (MQ=255)
                                                                                                                                                                                      gTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCACGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACACGTTACGATCAACAATCTGATGCCTGTATTATGCGTCTTGCCTGATCCAAAAAGAAcca                                                                                    >  1:1409511/1‑288 (MQ=255)
                                                                                                                                                                                       tCGTACTACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCg                                                                                   >  1:1057632/1‑289 (MQ=255)
                                                                                                                                                                                           aCCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACAct                                                                                                                                                                <  1:1220601/208‑1 (MQ=255)
                                                                                                                                                                                                 aTCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGc                                                                         >  1:1104120/1‑289 (MQ=255)
                                                                                                                                                                                                     gCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGt                                                                     >  1:1548451/1‑289 (MQ=255)
                                                                                                                                                                                                     gCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGt                                                                     >  2:764686/1‑289 (MQ=255)
                                                                                                                                                                                                     gCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGt                                                                     >  1:543722/1‑289 (MQ=255)
                                                                                                                                                                                                     gCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGt                                                                     >  1:1598615/1‑289 (MQ=255)
                                                                                                                                                                                                      cAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGAt                                                                                                                                                                                                                                   >  2:1404146/1‑130 (MQ=255)
                                                                                                                                                                                                         cTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGAc                                                                                                                                                                                                                                         <  1:334868/121‑1 (MQ=255)
                                                                                                                                                                                                         cTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGAc                                                                                                                                                                                                                                         >  2:334868/1‑121 (MQ=255)
                                                                                                                                                                                                          tAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTAt                                                                  <  2:1566556/287‑1 (MQ=255)
                                                                                                                                                                                                            aaTGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGt                                                              <  1:1953765/289‑1 (MQ=255)
                                                                                                                                                                                                             agggaggggaggaggATGAAAACCAG‑TGTGGGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTACCCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTc                                                             <  2:1773402/275‑1 (MQ=255)
                                                                                                                                                                                                             aTGGAGAGCACGAAGATGAAAACCTG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTc                                                             <  2:409086/289‑1 (MQ=255)
                                                                                                                                                                                                               ggAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGt                                                              >  1:978485/1‑286 (MQ=255)
                                                                                                                                                                                                                   agCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGTCGGGTTATGTTTCCTGGtt                                                       >  2:1814688/1‑289 (MQ=255)
                                                                                                                                                                                                                   agCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGtt                                                       >  2:889820/1‑289 (MQ=255)
                                                                                                                                                                                                                    gCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGa                                                                                                                                                                     >  1:370738/1‑178 (MQ=255)
                                                                                                                                                                                                                          cgATGAAAGCCAGTTGTG‑GGATAGGCGCTTTTGAAATCGACGACGGCGAATTACACCGTGAATCGCCGGGTGATCGAACGTTAACCAGTCCTTGTGAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTcccc                                                <  2:1833443/288‑1 (MQ=255)
                                                                                                                                                                                                                          aGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTccc                                                 <  1:181332/288‑1 (MQ=255)
                                                                                                                                                                                                                                      g‑tgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTc                                                                                                                                                           >  2:1675132/1‑170 (MQ=255)
                                                                                                                                                                                                                                      g‑tgtGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTaaaa                                      >  1:738246/1‑287 (MQ=255)
                                                                                                                                                                                                                                         gtgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAAt                                     <  1:342285/286‑1 (MQ=255)
                                                                                                                                                                                                                                          tgCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTAt                                                                  >  1:133155/1‑256 (MQ=255)
                                                                                                                                                                                                                                                  ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTc                                                                                                                                                           >  2:1366317/1‑159 (MQ=255)
                                                                                                                                                                                                                                                  ggCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCgg                                                                       >  2:290403/1‑243 (MQ=255)
                                                                                                                                                                                                                                                      cTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAAcc                                                                                                                                                                                               <  1:1082162/119‑1 (MQ=255)
                                                                                                                                                                                                                                                      cTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAAcc                                                                                                                                                                                               >  2:1082162/1‑119 (MQ=255)
                                                                                                                                                                                                                                                          tcgaaTCGACGACGGCTAATTACACGGTGAAACGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCGACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCGCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAAGCTGCTGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTa                 <  2:379287/286‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTa                 <  2:1598615/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          caagtACACGGTGAATCGCCATGTGATCGAACGTTAACCATTCCTTGTAAATCTGCCCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCg  <  2:1105062/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                              
GCATCAACCGATTGGTTTAGCCAAACGGATTGGTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAG‑TGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTAAATCTGACCCCGATTTATGTATGCAACTGGATGCCTGGGATGCTGAAACCAGTATCCCTGCCCTGCTAAATGGCGAACACTCTGTCCTTTACCGTACCCGTTACGATCAACAATCTGATGCCTGGATTATGCGTCTTGCCTGATCCAAAAAGAACCCGTCGGCATGGCGGGTTATTTGTCCTGGTTATTCCCCCGTTGTAAAATCTCTCCTAAACTTAACGGTACGGCACCACACTTCG  >  CP042583/1602279‑1602831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A