Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,614,694 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,614,6940AT100.0% 527.9 / NA 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (118/107);  total (118/107)
*CP0425831,614,6950CG99.6% 530.7 / NA 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (118/106);  minor base A (0/1);  total (118/107)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,614,6960TA99.6% 531.9 / NA 225intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (118/106);  minor base G (0/1);  total (118/107)
Fisher's exact test for biased strand distribution p-value = 4.76e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 225 total aligned reads displayed.

TGTGGTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCC  >  CP042583/1614414‑1614973
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
tgtgGTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAg                                                                                                                                                                                                                                                                                 >  1:304958/1‑289 (MQ=255)
 gtgGTTAATGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGt                                                                                                                                                                                                                                                                                <  2:1656817/289‑1 (MQ=255)
   ggTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTaa                                                                                                                                                                                                                                                                              >  2:597621/1‑289 (MQ=255)
   ggTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTaa                                                                                                                                                                                                                                                                              >  2:279352/1‑289 (MQ=255)
   ggTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACGGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGGACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTaa                                                                                                                                                                                                                                                                              >  1:718295/1‑289 (MQ=255)
    gTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAg                                                                                                                                                                                                                                                                             >  1:429288/1‑289 (MQ=255)
      tAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAgg                                                                                                                                                                                                                                                                            >  2:723270/1‑288 (MQ=255)
       aGTGGAACCACCGGTCGCCAGCAGTGCAACGATACGGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGcc                                                                                                                                                                                                                                                                          >  1:1098887/1‑289 (MQ=255)
       aGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGCTTTGGCAGTACCGTAGAAAGTACATGTTCCCCGCCCATGGTCACACCCGGCTTCTGACCCCAGTAAGGc                                                                                                                                                                                                                                                                           >  2:1515884/1‑288 (MQ=255)
         tGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCCGTACCGTAGAAAGTAACTGTTCCCGGCGCATGGTAAGAGGCGGCTTCTGACTCCAGAAAGGCCAt                                                                                                                                                                                                                                                                        >  2:1012497/1‑289 (MQ=255)
           gAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATg                                                                                                                                                                                                                                                                       <  2:68186/288‑1 (MQ=255)
                    gTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACtt                                                                                                                                                                                                                                                             >  1:1538880/1‑289 (MQ=255)
                             agTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCtt                                                                                                                                                                                                                                                       <  1:357825/286‑1 (MQ=255)
                               tGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGACAGTACATGTTCCTGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTCCCTTCGGCa                                                                                                                                                                                                                                                  >  2:961310/1‑289 (MQ=255)
                               tGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCa                                                                                                                                                                                                                                                  >  1:1053570/1‑289 (MQ=255)
                               tGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCa                                                                                                                                                                                                                                                  >  2:542766/1‑289 (MQ=255)
                                      aTACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCCTGCCGTCCACTTTACCTTCGGGATaaa                                                                                                                                                                                                                                              >  2:1254723/1‑286 (MQ=255)
                                      aTACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATaaa                                                                                                                                                                                                                                              >  1:35420/1‑286 (MQ=255)
                                       tcccGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCTCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAg                                                                                                                                                                                                                                             <  1:1472316/284‑1 (MQ=255)
                                                ccaccacTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACg                                                                                                                                                                                                                                 <  2:861203/289‑1 (MQ=255)
                                                                          ccGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGc                                                                                                                                                                                                       <  1:279352/289‑1 (MQ=255)
                                                                             aTCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCtt                                                                                                                                                                                                     >  1:1440073/1‑288 (MQ=255)
                                                                                ggCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCa                                                                                                                                                                                                 <  1:1293525/289‑1 (MQ=255)
                                                                                    tCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAACGCTGGCGACTACGCACTTTTTCTTTATTTGGCAATGCGCTTGCCATCgg                                                                                                                                                                                             >  2:472119/1‑289 (MQ=255)
                                                                                     ccATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGt                                                                                                                                                                                            <  2:110050/289‑1 (MQ=255)
                                                                                        ttcattACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACGTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCa                                                                                                                                                                                         >  2:914723/1‑289 (MQ=255)
                                                                                            ttaccgtacacGGTCAGACGAGTAACCAGACGAGAAGATGCGGCGGTTAAAGGATCGGGCTGCGGAGAAGCCGGATGGACAAAAGAAGATCCTGGCAACGGCACGCCGACAACCTCCTCCACCAGCTGGTTGGTGATGGAAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTATGACGCCATTATGGCCATGCGGTCCACTTTACCTGAGGCAGAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGAc                                                                                                                                                                                      <  2:272228/278‑1 (MQ=255)
                                                                                             taccattaccGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACg                                                                                                                                                                                     >  1:531473/1‑288 (MQ=255)
                                                                                                  ttaccGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATCAAGCTGGCGAATACGCCCTTTTTCTTTATTTGGCAAACCCCTTGCCTTCGGTCCAGACGGCCCaa                                                                                                                                                                               >  2:1815076/1‑289 (MQ=255)
                                                                                                  ttaccGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACaa                                                                                                                                                                               >  2:1757628/1‑289 (MQ=255)
                                                                                                   taccGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACaaa                                                                                                                                                                              >  2:1677484/1‑289 (MQ=255)
                                                                                                          cATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGc                                                                                                                                                                        <  1:1830539/288‑1 (MQ=255)
                                                                                                          cATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCa                                                                                                                                                                       >  1:1906899/1‑289 (MQ=255)
                                                                                                          cATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCa                                                                                                                                                                       >  1:1333365/1‑289 (MQ=255)
                                                                                                             gCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGAc                                                                                                                                                                                      >  2:1281379/1‑271 (MQ=255)
                                                                                                             gCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGc                                                                                                                                                                    >  2:1112721/1‑289 (MQ=255)
                                                                                                                tgtAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCg                                                                                                                                                                                                                                                                     <  2:104636/189‑1 (MQ=255)
                                                                                                                  tAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAAt                                                                                                                                                                >  2:1935754/1‑288 (MQ=255)
                                                                                                                         aCGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTATCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaac                                                                                                                                                        >  1:1850917/1‑288 (MQ=255)
                                                                                                                         aCGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAAACGGCACAAACACCCCCGGCAAATGACCaacc                                                                                                                                                        >  2:1848189/1‑287 (MQ=255)
                                                                                                                          cgcgCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacg                                                                                                                                                       >  2:1160777/1‑287 (MQ=255)
                                                                                                                                 cTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacgacaggg                                                                                                                                                 <  2:1338942/288‑9 (MQ=255)
                                                                                                                                  tGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacgacaggg                                                                                                                                                 <  1:1677484/287‑9 (MQ=255)
                                                                                                                                         gTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCg                                                                                                                                        >  1:502474/1‑289 (MQ=255)
                                                                                                                                                      gcAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGa                                                                                                                            <  1:72367/288‑1 (MQ=255)
                                                                                                                                                           ggAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACaa                                                                                                                         <  1:953504/286‑1 (MQ=255)
                                                                                                                                                             ggaATCCGGAGGAACAAACGAAGAGCCTGGCAACTGCAGCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCtt                                                                                                                     <  2:1638609/287‑1 (MQ=255)
                                                                                                                                                                  cctgATGAACAAAAGACGAGCCTGGCAACGGCATCCTCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACCGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                               <  2:1467256/286‑1 (MQ=255)
                                                                                                                                                                  ccGGACGAACAAAATGAGAGCCTCGCCACTGGATCCCCATACACTCCGCCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                               <  2:1745641/289‑1 (MQ=255)
                                                                                                                                                                    ggATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                             <  1:914723/289‑1 (MQ=255)
                                                                                                                                                                    ggATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                             <  2:780259/289‑1 (MQ=255)
                                                                                                                                                                     gATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                             <  2:33723/288‑1 (MQ=255)
                                                                                                                                                                       tGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcacaca                                                                                                           <  2:1440073/288‑1 (MQ=255)
                                                                                                                                                                        gAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACAcc                                                                                                         <  1:597621/289‑1 (MQ=255)
                                                                                                                                                                                     gCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACagag                                                                                              <  1:1815076/287‑1 (MQ=255)
                                                                                                                                                                                      ccTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGaa                                                                                                   <  1:987729/281‑1 (MQ=255)
                                                                                                                                                                                               tGCTTCCCCATAAACTCCACACCGATCTGGTTGGGGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  <  1:375921/289‑1 (MQ=255)
                                                                                                                                                                                               tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  <  2:518881/289‑1 (MQ=255)
                                                                                                                                                                                               tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  >  1:1273155/1‑289 (MQ=255)
                                                                                                                                                                                               tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  <  1:1160777/289‑1 (MQ=255)
                                                                                                                                                                                               tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  <  1:933991/289‑1 (MQ=255)
                                                                                                                                                                                               tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                  >  1:1033254/1‑289 (MQ=255)
                                                                                                                                                                                                   tctccATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACagag                                                                                              >  2:815313/4‑273 (MQ=255)
                                                                                                                                                                                                        aTAAAATCACCCCCCCTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATggg                                                                         <  2:304958/289‑1 (MQ=255)
                                                                                                                                                                                                          aaaCTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGAc                                                                       <  1:12309/289‑1 (MQ=255)
                                                                                                                                                                                                                caccaccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGAACCGGGACAATCTTTTAGCACACACCGAGGAACACAGCACCATCAAACATGTTATGGGACAGcccc                                                                 >  1:1075154/1‑289 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCACATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACCATCTTGTCGCAACCACCGCACAACAGAGCAACACTAAACATCGTATGTGACATCCCAAccaccg                                                          >  2:1949429/1‑288 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacgac                                                                                                                                                     <  1:1551897/197‑5 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACaa                                                                                                                         <  1:1396769/225‑1 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACaa                                                                                                                         >  2:1406212/1‑225 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACcgccgc                                                         >  1:1447721/1‑289 (MQ=255)
                                                                                                                                                                                                                        tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGACATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGCCAGCCCCACccccgc                                                         >  1:1128149/1‑289 (MQ=255)
                                                                                                                                                                                                                          tggttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAg                                                                                                                                                                                        >  1:1587800/1‑160 (MQ=255)
                                                                                                                                                                                                                             ttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                     <  2:1273155/288‑1 (MQ=255)
                                                                                                                                                                                                                                gtgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                     >  1:1745379/1‑285 (MQ=255)
                                                                                                                                                                                                                                gtgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATAACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATc                                                  >  2:106175/1‑288 (MQ=255)
                                                                                                                                                                                                                                      gCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCgg                                                                                                                                                                                                                                                                    <  2:1530201/72‑1 (MQ=255)
                                                                                                                                                                                                                                      gCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCgg                                                                                                                                                                                                                                                                    >  1:1530201/1‑72 (MQ=255)
                                                                                                                                                                                                                                      gCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                     >  1:1228216/1‑279 (MQ=255)
                                                                                                                                                                                                                                      gCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                     <  2:1228216/279‑1 (MQ=255)
                                                                                                                                                                                                                                      gCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCAACAAACATGTTATGGGACAGCCCCACCGCCCCAGACATCGccaca                                            >  2:1691751/1‑284 (MQ=255)
                                                                                                                                                                                                                                          tACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACCGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGACCCCCATCAAACATGTTATGGGACAGCCCCACCCCCGCCGCCATCGCCATCACtt                                        >  2:1382227/1‑288 (MQ=255)
                                                                                                                                                                                                                                           aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTc                                       >  1:546817/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACagag                                                                                              <  1:1482710/224‑1 (MQ=255)
                                                                                                                                                                                                                                                    aGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACagag                                                                                              >  2:1482710/1‑224 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACg                                                                                                                                                                                                                                 <  2:35696/91‑1 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                               >  1:1246719/1‑205 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGca                                                                                                               <  2:1246719/205‑1 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCa                            >  1:1312077/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCa                            >  1:1753919/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAAAGCACCATCAAACATGGTATAGGAGAGCACCACCGCCGCAGACAACGCAATAACTTCGCgggctagaag                           >  1:46798/1‑281 (MQ=255)
                                                                                                                                                                                                                                                         aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacgacaggg                                                                                                                                                 <  2:878933/168‑9 (MQ=255)
                                                                                                                                                                                                                                                         aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCaaacgacaggg                                                                                                                                                 >  1:878933/1‑160 (MQ=255)
                                                                                                                                                                                                                                                         aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcg                         >  1:653113/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACAt                                                   >  1:1101168/1‑253 (MQ=255)
                                                                                                                                                                                                                                                                        ggTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCa                                                                                         <  2:375871/209‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ggTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATc         <  1:814687/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggacggcgcgGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTGCGGCATAAAGCTGGCGAATACTCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAGCACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATGCCATc         <  2:1201645/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                               cgcgGCTTCTGACTCCAGTAAGGCCGTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGccc   <  1:1007032/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                               cgcgGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGccc   <  1:1957211/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
TGTGGTTAGTGGAACCACCGGTCGCCAGCAGTGCAACGATACCGTTCACCACCACTTTCTCATCGATCATCTTACCGATCGGCATCCATTCATTACCATTACCGGTCATGCGTGTAACCTGACGCGCAGCTGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCC  >  CP042583/1614414‑1614973

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A