Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,633,936 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,633,9360AT100.0% 463.2 / NA 197intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (98/99);  total (98/99)
*CP0425831,633,9370GC99.5% 460.0 / NA 197intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (96/99);  minor base T (1/0);  total (98/99)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,633,9380CG100.0% 461.4 / NA 197intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (98/99);  total (98/99)

Only 100 of 197 total aligned reads displayed.

GGCGACGCTCAGCGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCAAGCATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTAGCGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTAGTCTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTAACTTTTAT  >  CP042583/1633656‑1634213
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
ggcgACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTACCAAGGGCTGAACCCCGTCGGCGCGCTGGTTCTTTTGGaaaaa                                                                                                                                                                                                                                                                               >  2:892007/1‑289 (MQ=255)
              tgcgtCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCCTTACTGGACAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCGTGTTCTTTCGGAAAAATTCAGTTTCGAAgg                                                                                                                                                                                                                                                                 >  2:1700732/1‑288 (MQ=255)
                  tCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGcc                                                                                                                                                                                                                                                             >  1:792460/1‑289 (MQ=255)
                  tCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTCACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGAGCGTTCGGAAAAATTAAGTTTCGAATAAGcc                                                                                                                                                                                                                                                             >  2:1422151/1‑289 (MQ=255)
                    gCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCaa                                                                                                                                                                                                                                                           <  1:1666175/289‑1 (MQ=255)
                      aaccatcatcaTGATAATTGCAAAATTATTGCCATCGACTGCTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCCTCGATGGTGGTGCGGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAg                                                                                                                                                                                                                                                         <  1:368543/284‑1 (MQ=255)
                             atcatGCTAATTTCAAAATTATTGCCATCGACAACTCCCCGGCGCTGATTGAACGCTGCCGACGTCATATTGACGCCTATAAAGCCCCTAGACCCGTAGACGCCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCAACGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCGTAACCACGGCGGCGCGCTGGTGCTTTCGTAAAAATTCAGTTTCGAAGACGCCAATGTTGGtaa                                                                                                                                                                                                                                                  >  2:1994846/1‑287 (MQ=255)
                              tccatatgaatGCACAATTATGGACGTCGACAACTCCCCGTCGTTGATTGAATGCTGCCTTCGTCATATTGACGCCTATAAGGCCCCTACGCCAGTAGACGTCATCGAAGGTGATATTGGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGACCCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                                                                                                                                 <  2:1712591/279‑1 (MQ=255)
                              tcatGGTAATTGCACAATTTTTGACATCAACAACTCCCCGGCGATGATTGAACGCAGCCGTCGTCATATTGACGCCTATAAAGCTCCTACGCCAATAGACGTCATTGAAGGGGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGGGCTGAATTTTACCCTGCAATTCCTGGAACCTGCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCTCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                                                                                                                                 <  2:1110496/289‑1 (MQ=255)
                              tcatGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                                                                                                                                 <  1:267954/289‑1 (MQ=255)
                               catAATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGAGGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCGACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAAc                                                                                                                                                                                                                                                <  2:1565169/289‑1 (MQ=255)
                                 tGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACtg                                                                                                                                                                                                                                              <  1:1706586/289‑1 (MQ=255)
                                                  ttGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             <  1:1479124/289‑1 (MQ=255)
                                                  ttGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             <  1:1271955/289‑1 (MQ=255)
                                                  ttGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             <  1:718932/289‑1 (MQ=255)
                                                         cGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATCTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTg                                                                                                                                                                                                                                                      <  1:1538722/257‑1 (MQ=255)
                                                         cGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATCTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTg                                                                                                                                                                                                                                                      >  2:1538722/1‑257 (MQ=255)
                                                                tCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTg                                                                                                                                                                                                               <  1:447312/289‑1 (MQ=255)
                                                                tCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTg                                                                                                                                                                                                               <  2:1669060/289‑1 (MQ=255)
                                                                  cccGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGcc                                                                                                                                                                                                             >  2:508749/1‑289 (MQ=255)
                                                                          tgatTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGTTTTAGGAAAAATTCAGTTTCGAAGATGCCAAATTTGGTGAACTGTTGTTTAACATGCACCACGACTGTAAACATGCCAACGGtt                                                                                                                                                                                                      >  2:257005/1‑288 (MQ=255)
                                                                             ttGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACa                                                                                                                                                                                                   <  1:900544/288‑1 (MQ=255)
                                                                             ttGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAg                                                                                                                                                                                                  <  2:921585/289‑1 (MQ=255)
                                                                               gAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCg                                                                                                                                                                                                <  1:556585/289‑1 (MQ=255)
                                                                                              cATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGc                                                                                                                                                                                  <  1:156980/288‑1 (MQ=255)
                                                                                               atatTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCa                                                                                                                                                                                >  2:1548242/1‑289 (MQ=255)
                                                                                                       gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGTTATTGGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                                                                                                                                        <  1:643060/289‑1 (MQ=255)
                                                                                                       gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             >  1:1729111/1‑236 (MQ=255)
                                                                                                       gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                                                                                                                                        >  2:1912065/1‑289 (MQ=255)
                                                                                                       gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                                                                                                                                        >  1:918540/1‑289 (MQ=255)
                                                                                                                 ccccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACGCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGa                                                                                                                                                              >  2:1896623/1‑289 (MQ=255)
                                                                                                                 ccccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGa                                                                                                                                                              >  2:162472/1‑289 (MQ=255)
                                                                                                                  ccctcagCCAGTAGGAGTCATTGAAGGGGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGa                                                                                                                                                              <  2:61455/282‑1 (MQ=255)
                                                                                                                   ccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             <  2:1368884/224‑1 (MQ=255)
                                                                                                                   ccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             >  1:1368884/1‑224 (MQ=255)
                                                                                                                   ccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGaaa                                                                                                                                                            >  2:679912/1‑289 (MQ=255)
                                                                                                                   ccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGaaa                                                                                                                                                            >  1:2000307/1‑289 (MQ=255)
                                                                                                                    cTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                                                                                                                             >  1:1917103/1‑223 (MQ=255)
                                                                                                                    cTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGaaaa                                                                                                                                                           >  1:1619480/1‑289 (MQ=255)
                                                                                                                    cTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGaaa                                                                                                                                                            >  1:657912/1‑288 (MQ=255)
                                                                                                                     tACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAAc                                                                                                                                                          >  1:1219492/1‑289 (MQ=255)
                                                                                                                      aCGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGcc                                                                                                                                                                                                             <  2:651597/237‑1 (MQ=255)
                                                                                                                      aCGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACg                                                                                                                                                         <  1:1194192/289‑1 (MQ=255)
                                                                                                                        gCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTTAAAACGCATCGATTGTTGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTg                                                                                                                                                       <  1:257005/289‑1 (MQ=255)
                                                                                                                           aGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGAt                                                                                                                                                     >  2:762682/1‑288 (MQ=255)
                                                                                                                             tAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcaccac                                                                                                                                                                                                                            >  2:173556/1‑215 (MQ=255)
                                                                                                                              aGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATg                                                                                                                                                    <  1:508749/286‑1 (MQ=255)
                                                                                                                                    cATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCgct                                                                                                                                           >  1:1987398/1‑287 (MQ=255)
                                                                                                                                    cATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGATGACCGAt                                                                                                                                           >  2:1007467/1‑289 (MQ=255)
                                                                                                                                             tGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGa                                                                                                                                   <  1:162472/288‑1 (MQ=255)
                                                                                                                                              gATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGaa                                                                                                                                  >  1:1396274/1‑288 (MQ=255)
                                                                                                                                              gATATTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGaa                                                                                                                                  <  1:99117/288‑1 (MQ=255)
                                                                                                                                               atatTCGCGATATCGCCATTGAAAACGCGTCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGaaa                                                                                                                                 >  2:826651/1‑288 (MQ=255)
                                                                                                                                               atatTCGCGATATCGCCAAGGAAAACGCATCGATGGTGGTGCGTAATGTGACCCTGCAAATCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCGTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGaaa                                                                                                                                 <  2:1832575/288‑1 (MQ=255)
                                                                                                                                                tatTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGc                                                                                                                                                                                  <  1:1946219/238‑1 (MQ=255)
                                                                                                                                                tatTCGCGATATCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCAACACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGc                                                                                                                                                                                  >  2:1946219/1‑238 (MQ=255)
                                                                                                                                                       gATATCGCCATTGGAAACGCCTCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAg                                                                                                                        <  2:339520/289‑1 (MQ=255)
                                                                                                                                                         tatCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCa                                                                                                                                                                                                                                       >  1:144418/1‑176 (MQ=255)
                                                                                                                                                         tatCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCa                                                                                                                                                                                                                                       <  2:144418/176‑1 (MQ=255)
                                                                                                                                                           tCGCCATTGAAAACGCATCGATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCAc                                                                                                                     >  2:387231/1‑288 (MQ=255)
                                                                                                                                                                                    ggtgCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCAt                                                                                           >  1:1864793/1‑289 (MQ=255)
                                                                                                                                                                                      tgCTGAATTTTACCCTGCAATTCCTGGACCCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATa                                                                                          <  2:1180464/288‑1 (MQ=255)
                                                                                                                                                                                        cTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAg                                                                                                                        <  1:420993/256‑1 (MQ=255)
                                                                                                                                                                                        cTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAg                                                                                                                        >  2:420993/1‑256 (MQ=255)
                                                                                                                                                                                         tGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGa                                                                                      <  1:1560056/289‑1 (MQ=255)
                                                                                                                                                                                          gAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGACAACGGTTACAGCGAACTGGTGATCAGCCAGAAGGGCAGCATGCTGGAAAACGTGAGGCGGACCGATTCCGTGGAAACCCACATAGCACGCCTGCATAAGCGAGGTTTTGAGGATAGTGAg                                                                                     >  2:14469/1‑289 (MQ=255)
                                                                                                                                                                                                tACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCCACATGCACAACGACTTTCAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCCTACCGCACGCCTGCCTACCGCCGGTTTTGACCAGAGTGAGCTGTgg                                                                               >  2:1162921/1‑289 (MQ=255)
                                                                                                                                                                                                  cccTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGt                                                                              >  1:1081919/1‑288 (MQ=255)
                                                                                                                                                                                                       cAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGt                                                                        >  1:544460/1‑289 (MQ=255)
                                                                                                                                                                                                            ccTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGGGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATACCGCCGGGTTTGAGCATGGTGAGCTGTGGTTCCAGGGCttt                                                                   >  2:1066674/1‑289 (MQ=255)
                                                                                                                                                                                                               ggAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                                                                                                                                 <  2:556739/112‑1 (MQ=255)
                                                                                                                                                                                                               ggAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTa                                                                  >  2:686989/1‑287 (MQ=255)
                                                                                                                                                                                                                 aaCCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACt                                                               <  1:1016635/288‑1 (MQ=255)
                                                                                                                                                                                                                      tCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                                                                                                                                        <  1:1168602/178‑1 (MQ=255)
                                                                                                                                                                                                                      tCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGtt                                                         <  1:945691/289‑2 (MQ=255)
                                                                                                                                                                                                                       ccGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGtt                                                         >  2:296568/1‑287 (MQ=255)
                                                                                                                                                                                                                        cGAGCGCCAGGCGTTACTGGATAACATTTATCAAGGGCTGAACCCCGGCGGCGCGCTTGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGttca                                                       <  1:1262161/289‑4 (MQ=255)
                                                                                                                                                                                                                                 ggCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCa                                              >  1:1044565/1‑289 (MQ=255)
                                                                                                                                                                                                                                 ggCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCa                                              >  1:711627/1‑289 (MQ=255)
                                                                                                                                                                                                                                   cGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGc                                               <  1:686989/286‑1 (MQ=255)
                                                                                                                                                                                                                                           gATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTcc                                                                           <  2:270653/250‑1 (MQ=255)
                                                                                                                                                                                                                                           gATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTcc                                                                           >  1:270653/1‑250 (MQ=255)
                                                                                                                                                                                                                                            aTAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCaga                                   >  1:1675855/1‑289 (MQ=255)
                                                                                                                                                                                                                                             tAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCagag                                  >  1:1805838/1‑289 (MQ=255)
                                                                                                                                                                                                                                               aaaTTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGa                                <  1:878203/289‑1 (MQ=255)
                                                                                                                                                                                                                                                aaTTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAACCGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTACAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGAc                               >  2:184390/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     aTCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGc                                                                                                                   >  1:1355535/1‑200 (MQ=255)
                                                                                                                                                                                                                                                     aTCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGc                          >  2:1136872/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        aaGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATg                       <  2:1337407/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          gggCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGa                      >  1:312679/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           ggCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATc                    >  1:1847356/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    ccGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGt           <  1:679912/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cggcggCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTa          >  2:776881/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      ggcggcGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTa          >  1:1885565/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                      ggcggcGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTa          >  1:1237339/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         ggcgCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTAACtt      <  1:1161602/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          gcgcgcTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGa                                                                                                                                   >  2:696324/1‑163 (MQ=255)
                                                                                                                                                                                                                                                                          gcgcgcTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGa                                                                                                                                   <  1:696324/163‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cgcTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTAACTTTTAt  >  2:1612308/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cgcTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAAACCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTTCACTGGTGGCATTAAAAGc                                      >  2:1881654/1‑253 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
GGCGACGCTCAGCGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCAAGCATGGTGGTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTAGCGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCATAACGCCGGTTTTGAGCATAGTGAGCTGTGGTTCCAGTGCTTTAACTTTGGTAGTCTGGTGGCATTAAAAGCAGAGGACGCTGCATGATCGACTTTGGTAACTTTTAT  >  CP042583/1633656‑1634213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A