Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,634,472 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,634,4720AT100.0% 350.7 / NA 149intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (75/74);  total (75/74)
*CP0425831,634,4730GC99.3% 348.1 / NA 149intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (75/73);  total (75/74)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,634,4740TA100.0% 349.6 / NA 149intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (75/74);  total (75/74)

Only 100 of 149 total aligned reads displayed.

GATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTAGTCACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGAGTAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCAGTCTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTG  >  CP042583/1634192‑1634750
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
gATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTAt                                                                                                                                                                                                                                                                                 <  1:1589420/289‑1 (MQ=255)
                       ctctGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATg                                                                                                                                                                                                                                                          <  2:642693/289‑1 (MQ=255)
                          tGATTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCg                                                                                                                                                                                                                                                       >  1:82347/1‑289 (MQ=255)
                            aTTGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGt                                                                                                                                                                                                                                                      >  1:1732263/1‑288 (MQ=255)
                             ttGCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTc                                                                                                                                                                                                                                                    <  2:434793/289‑1 (MQ=255)
                              tGCCAAAAGTCATCTTTCACCCTGGCACGAAGTGTTGACCGCGAATATTGCTAAATGGCAGCGGGAGCAGCGGCACGGGTTGTTTAGGCAGTGGTCAAATGCGGTAGAGTTTCTACCTGAAATTAAACCTTATCGTCTTGATTTATTGCATAACGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTcc                                                                                                                                                                                                                                                   <  2:1658976/289‑1 (MQ=255)
                               gCCAAAAATCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGCCAAACTGTATACAGAATGGCGTTcgg                                                                                                                                                                                                                                                  >  2:525960/1‑287 (MQ=255)
                                  aaaaaTCATCTTTCACACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACt                                                                                                                                                                                                                                               <  1:525960/289‑1 (MQ=255)
                                         atctttcacACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATg                                                                                                                                                                                                                                        <  2:1852370/281‑1 (MQ=255)
                                                   atggagcGAAGCGCTGCAGGCCAAGATTGCTAACTGGCAGCGCGGGCAGCAGAACGGGTTGTTTAAGCAGTGGTGAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGtt                                                                                                                                                                                                                              <  2:1732263/283‑1 (MQ=255)
                                                      gCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCgtgt                                                                                                                                                                                                                               >  1:365128/1‑285 (MQ=255)
                                                      gCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGGTCTCACTGTATGGCGTCAACATCGATACCGAGTGGCGTTCAGACTGGAAATGGGATCGTGTTCt                                                                                                                                                                                                                            >  2:505652/1‑288 (MQ=255)
                                                       cTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTg                                                                                                                                                                                                                           <  2:1340477/288‑1 (MQ=255)
                                                       cTCGAAACGCGGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTg                                                                                                                                                                                                                           <  2:1309124/288‑1 (MQ=255)
                                                        tCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑c                                                                                                                                                                                                                         >  1:496810/1‑288 (MQ=255)
                                                            aaCGCGGCCCTGGCATATTGCGAACTGGCAGCGCGGGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTAAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCa                                                                                                                                                                                                                     <  2:1564059/288‑1 (MQ=255)
                                                                             ttGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGACTTAACCgg                                                                                                                                                                                                   <  1:1807820/289‑1 (MQ=255)
                                                                              tGCTAGCTGGCAGGGCGGGCAGCAGAACTGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAACCCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCttt                                                                                                                                                                                                                <  2:1867421/275‑1 (MQ=255)
                                                                                 tAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACg                                                                                                                                                                                                <  1:1437264/288‑1 (MQ=255)
                                                                                  aaCTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCa                                                                                                                                                                                              <  1:62620/289‑1 (MQ=255)
                                                                                  aaCTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCa                                                                                                                                                                                              <  1:920083/289‑1 (MQ=255)
                                                                                  aaCTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCa                                                                                                                                                                                              <  1:697790/289‑1 (MQ=255)
                                                                                  aaCTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCa                                                                                                                                                                                              <  2:1604275/289‑1 (MQ=255)
                                                                                  aaCTGGCAGCGCGAGAAGCAGAACGGGTTTTTTAATCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTGACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCa                                                                                                                                                                                              <  2:73043/289‑1 (MQ=255)
                                                                                      ggCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACt                                                                                                                                                                                                                                               <  1:1626312/237‑1 (MQ=255)
                                                                                      ggCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACt                                                                                                                                                                                                                                               >  2:1626312/1‑237 (MQ=255)
                                                                                        cAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAAc                                                                                                                                                                                                      >  1:1867421/1‑275 (MQ=255)
                                                                                          gcgcGAGCAGCAGCACGGGTTGTTTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATCACGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCCTTCTGATTTAACCGGCAGCACCAtt                                                                                                                                                                                         >  2:118976/1‑286 (MQ=255)
                                                                                                            gttgttTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGAc                                                                                                                                                                                                                                                <  1:1191036/214‑1 (MQ=255)
                                                                                                            gttgttTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAg                                                                                                                                                                     <  2:1934934/288‑1 (MQ=255)
                                                                                                             ttgttTAAGCAGTGGTCAAATGCGGTGGAGTTGCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATGCCCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAg                                                                                                                                                                     <  2:544460/288‑1 (MQ=255)
                                                                                                              tgttTAAGCAGTGGTCAAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCgg                                                                                                                                                                  <  2:384097/289‑1 (MQ=255)
                                                                                                                 ttaagacttgggcaaaTGCGGTGGGATTTCGACCTGAGAGTAAGGCATATCGGCTTTATTTATTGCATAGCGTTACAGCAGAAAGCGAAGAACCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGACGCGCAAACTGATG‑ACGTGGCGCAGAAGGCCGTTCTCACTGTATGGCGTCGACATCAATACCGAATGGCGTTCCGACTGGCAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTGAACCGGAGGCACCATTCTGGATGTCGGCTGCGGCAGCGGtt                                                                                                                                                                <  2:1200508/274‑1 (MQ=255)
                                                                                                                      cagtggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGCTG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCAACTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATcaca                                                                                                                                                          >  1:643936/10‑289 (MQ=255)
                                                                                                                      cagtggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCa                                                                                                                                                                      <  2:1420345/268‑1 (MQ=255)
                                                                                                                      cagtggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCa                                                                                                                                                                      >  1:1420345/10‑277 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTc                                                                                                                                                                                                                                                                           <  1:938138/168‑1 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCa                                                                                                                                                                      >  1:1905203/6‑273 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCa                                                                                                                                                                      <  2:1905203/268‑1 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAg                                                                                                                                                                     <  2:1063329/269‑1 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAg                                                                                                                                                                     >  1:1063329/6‑274 (MQ=255)
                                                                                                                          ggtcaaaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACAtgtg                                                                                                                                                      >  1:769744/6‑289 (MQ=255)
                                                                                                                             caaaTGCGGTGGGGTTTCTACCTGAAAGTAAACCGTATCGTCTTGCTTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGgcg                                                                                                                                                   <  2:881284/287‑1 (MQ=255)
                                                                                                                               aaTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCa                                                                                                                                                 <  2:1699461/289‑1 (MQ=255)
                                                                                                                                aTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑cc                                                                                                                                                                                                                        <  2:92862/217‑1 (MQ=255)
                                                                                                                                aTGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑cc                                                                                                                                                                                                                        >  1:92862/1‑217 (MQ=255)
                                                                                                                                   cGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGGGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGAt                                                                                                                                             >  1:884388/1‑289 (MQ=255)
                                                                                                                                      tGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGAGTTAACCAGCCGCACCATTCTGGATGTCGGCTGCCGCAGCGGGTCACACATGTGGCGCATTATTg                                                                                                                                           >  2:1126585/1‑288 (MQ=255)
                                                                                                                                             tCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATg                                                                                                                                                                                                                                        >  1:1508128/1‑189 (MQ=255)
                                                                                                                                             tCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATg                                                                                                                                                                                                                                        <  2:1508128/189‑1 (MQ=255)
                                                                                                                                                aCCTGAATGTAAACCGATTCGTCTTGATTTATTGCAGAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGgcgcg                                                                                                                                <  2:82347/289‑1 (MQ=255)
                                                                                                                                                aCCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGgcgcg                                                                                                                                <  2:365128/289‑1 (MQ=255)
                                                                                                                                                aCCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGgcgc                                                                                                                                 >  1:1200823/1‑288 (MQ=255)
                                                                                                                                                          aaaCCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCgg                                                                                                                      <  2:497638/289‑1 (MQ=255)
                                                                                                                                                                tATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCTACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGa                                                                                                                                                                                                  >  1:1691132/1‑207 (MQ=255)
                                                                                                                                                                tATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGa                                                                                                                >  2:425758/1‑289 (MQ=255)
                                                                                                                                                                  tgttCTTGATTTATGGCATAGGGTTACGGCAGAAAGGGAAGGGCCATTGGGCTCAGGGCAAATTAAACGCATTTAAACGCTTATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGAt                                                                                                               <  2:687315/285‑1 (MQ=255)
                                                                                                                                                                  tCGTCTTGATTTCTTGCATAGCGTTACGGCAGAAATCGAAGAGCAACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGAGG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGAt                                                                                                               <  2:920260/289‑1 (MQ=255)
                                                                                                                                                                        tGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACCTGTTGCGCATGATTGGCGCCGGCGCGCACCTCTCGGGGGGGGTCGcccc                                                                                                         >  2:1441396/1‑288 (MQ=255)
                                                                                                                                                                          aTTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGc                                                                                                                                                                             >  1:893049/1‑218 (MQ=255)
                                                                                                                                                                          aTTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGc                                                                                                                                                                             <  2:893049/218‑1 (MQ=255)
                                                                                                                                                                               ttGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTGGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGGCCCCCGCGGTGGGGAAGTGCCCTACGcc                                                                                                   >  2:638971/1‑286 (MQ=255)
                                                                                                                                                                               ttGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCaaa                                                                                                 >  1:1279625/1‑288 (MQ=255)
                                                                                                                                                                                tGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCa                                                                                                                                                                                                                     <  2:297197/172‑1 (MQ=255)
                                                                                                                                                                                tGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCa                                                                                                   >  1:518802/1‑286 (MQ=255)
                                                                                                                                                                                    tAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGtt                                                                                             >  1:267792/1‑288 (MQ=255)
                                                                                                                                                                                       cGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGtt                                                                                             >  1:446540/1‑285 (MQ=255)
                                                                                                                                                                                         ttACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCtgt                                                                                        >  2:431727/1‑288 (MQ=255)
                                                                                                                                                                                            cGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCa                                                                                    >  1:441179/1‑289 (MQ=255)
                                                                                                                                                                                            cGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCa                                                                                    <  2:267792/289‑1 (MQ=255)
                                                                                                                                                                                                 gAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTa                                                                                                       <  2:1596302/265‑1 (MQ=255)
                                                                                                                                                                                                 gAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTg                                                                               >  1:1683069/1‑289 (MQ=255)
                                                                                                                                                                                                 gAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACAACGATACCGAATGACGTTCCGACTGGAAATGGGATCGGGTTCTG‑CCCCATCTTTATGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCAGCTCGCGGTGGGGATAGACCCTACGCAACGGTTTCTGGGCCAGTTTg                                                                               >  1:292715/1‑289 (MQ=255)
                                                                                                                                                                                                       gAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGc                                                                           <  1:1575085/287‑1 (MQ=255)
                                                                                                                                                                                                       gAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGc                                                                           <  1:1492602/287‑1 (MQ=255)
                                                                                                                                                                                                         gaagCGACTGAGCGATGTGCAAATTAAACGCATTGGAACGCAGGTGAGAAACCTGATG‑CCGGGGGTCCAAGGGCCGGTCTCACTGTAGGGCGTCAACGTCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTACCCGGACGCACCATTCTGGATGACGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGt                                                                        <  2:44964/286‑1 (MQ=255)
                                                                                                                                                                                                         agagCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGt                                                                        <  2:1683069/288‑1 (MQ=255)
                                                                                                                                                                                                             ccACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGgcg                                                                                                                                        <  2:254706/220‑1 (MQ=255)
                                                                                                                                                                                                              cACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTa                                                                   <  1:1013855/288‑1 (MQ=255)
                                                                                                                                                                                                                cgtaGCGCAGGGCCAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGGTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAac                                                                <  2:1279625/286‑1 (MQ=255)
                                                                                                                                                                                                                  gAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAacta                                                              <  1:1080407/289‑1 (MQ=255)
                                                                                                                                                                                                                   aGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAact                                                               >  1:1142347/1‑287 (MQ=255)
                                                                                                                                                                                                                     cgcAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAactact                                                            <  1:1877208/288‑1 (MQ=255)
                                                                                                                                                                                                                       cAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGGGCGTAAACTACTggg                                                         >  1:97793/1‑289 (MQ=255)
                                                                                                                                                                                                                        aGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGGTTGAAGCGGTGCGTAAACTACTGGGt                                                        >  1:913470/1‑289 (MQ=255)
                                                                                                                                                                                                                          ggCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTaa                                                      >  1:1635566/1‑289 (MQ=255)
                                                                                                                                                                                                                                       gatagAAAAGCAGAGGCGCAACCGGAGG‑CCGGTGGGCTAAGGGCCCTGCTGACAGGATGGAGTCAACACCGATCACGAATGGCGTTCCTACTGGAAATGGGATCGTGTTCTG‑CCACATCTTTCTGATTTAAACGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGAAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAgcgcg                                           <  2:1336737/283‑1 (MQ=255)
                                                                                                                                                                                                                                        aTTGAAACGCTGAGTCGCAACCTGATG‑CCGTGGCGCAAAGGCCGGTTCTCACTGTAGGGCGTGAACATCGATACCGAATGGCGTCCCGACTGGAAATGGGTTCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAgcgcgcg                                         <  2:769744/288‑1 (MQ=255)
                                                                                                                                                                                                                                          tGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCAt                                      >  1:1250504/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  tGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTAcc                              >  2:1200419/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     tGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGtt                           <  1:43453/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGaaca               >  1:411058/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGaaca               <  1:425758/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tG‑CCGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGACTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAacta                                                              >  1:651162/1‑242 (MQ=255)
                                                                                                                                                                                                                                                                     cGTGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCCCGGTGGGGATCGACCCTACGCAACTGTTTCTTTGCCAGTTTGAAGCGGTGCGTAAACCACTGGGTAATGATAAGCGCGTCATTTTGTTCCCCTTCGGTATTGactaaag            >  2:1626758/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                       tGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACtt           >  1:1926224/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       tGGCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGGGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACtt           >  1:997796/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                        ggCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAactact                                                            >  2:31240/1‑238 (MQ=255)
                                                                                                                                                                                                                                                                        ggCGCAAAGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAactact                                                            <  1:31240/238‑1 (MQ=255)
                                                                                                                                                                                                                                                                               aGGGCCGTTCTCACTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTg  >  1:1061948/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
GATCGACTTTGGTAACTTTTATTCTCTGATTGCCAAAAATCATCTTAGTCACTGGCTCGAAACGCTGCCCGCGCAGATTGCTAACTGGCAGCGCGAGCAGCAGCACGGGTTGTTTAAGCAGTGGAGTAATGCGGTGGAGTTTCTACCTGAAATTAAACCGTATCGTCTTGATTTATTGCATAGCGTTACGGCAGAAAGCGAAGAGCCACTGAGCGCAGGGCAAATTAAACGCATTGAAACGCTGATGCGCAACCTGATG‑CCGTGGCGCAAAGGGCCGTTCAGTCTGTATGGCGTCAACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTG‑CCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTG  >  CP042583/1634192‑1634750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A