Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,639,400 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,639,4000AT99.2% 580.9 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (2/0);  new base T (141/105);  total (144/105)
Fisher's exact test for biased strand distribution p-value = 5.10e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,639,4010CG98.8% 571.4 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (141/105);  minor base T (3/0);  total (144/105)
Fisher's exact test for biased strand distribution p-value = 2.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,639,4020TA99.6% 578.6 / NA 249intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (143/105);  minor base C (1/0);  total (144/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

CGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGGCTATACTCGTCCGCGTGTTCATCACTACTCATGGACAATCCTTGATTACGATAACGCATCGGACTGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTACTTAAACCTTGCAGTGCGTCACTTTTTTGCCCACTTGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAGCGCACATATCGAAGGCGCGATGAAAAGTCACTGCCAGCGGACCGGCAG  >  CP042583/1639122‑1639680
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
cGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGc                                                                                                                                                                                                                                                                                 >  2:1050668/1‑288 (MQ=255)
     tGCGCACTGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCGGGTTGTTCATCGCTGGACATGGACAATCCTTCATTCCACAAACGCATCGGATCGGTTTGCCACgt                                                                                                                                                                                                                                                                            >  2:666891/1‑287 (MQ=255)
            tGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACCCATTGGTGAGGCTTGcaagtctccgccgg                                                                                                                                                                                                                                                                    >  2:1509603/1‑276 (MQ=255)
            tGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTACGCGTGTTAATCTGATGACCTGGACACACCTTGATTACGATAACGCATCGGAGAGGCTTGCCCCGCTCCCACgg                                                                                                                                                                                                                                                                    >  1:365365/1‑289 (MQ=255)
             gTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATCTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCAACGGGTAGGCTTGCCACCCTCCCGCCGa                                                                                                                                                                                                                                                                   >  2:1376761/1‑289 (MQ=255)
                 cccGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCa                                                                                                                                                                                                                                                                               <  2:335325/273‑1 (MQ=255)
                 cccGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTa                                                                                                                                                                                                                                                               >  1:338232/1‑289 (MQ=255)
                 cccGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGACGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGcaa                                                                                                                                                                                                                                                               >  1:148998/1‑287 (MQ=255)
                  ccGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTAt                                                                                                                                                                                                                                                              <  1:92171/289‑1 (MQ=255)
                    gttCAACAGATTCCGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATgg                                                                                                                                                                                                                                                            <  2:441300/287‑1 (MQ=255)
                      tCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGCGCTATgg                                                                                                                                                                                                                                                            >  2:680223/1‑287 (MQ=255)
                      tCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATAATCGTCCGCGTGTTCATCTGATGACATGGACAAACCTTGATTACGATAACGCATCGGTGAGGCCTGCCATGACCCCGGGGGGCTATGGAc                                                                                                                                                                                                                                                          >  2:312267/1‑289 (MQ=255)
                        aaCAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGCTAACGCATCGGTGACGCTTGCCACCCTCCCTCGGGCCTATGGAcc                                                                                                                                                                                                                                                         >  2:1251998/1‑287 (MQ=255)
                        aaCAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACt                                                                                                                                                                                                                                                         >  2:1617193/1‑288 (MQ=255)
                              tCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAg                                                                                                                                                                                                                                                    <  1:1347839/287‑1 (MQ=255)
                               cACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCAAGCa                                                                                                                                                                                                                                                  >  1:1611455/1‑288 (MQ=255)
                                       tcgttcgtTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCa                                                                                                                                                                                                                                          >  2:169689/1‑288 (MQ=255)
                                       tcgttcgtTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCAt                                                                                                                                                                                                                                         <  1:680223/289‑1 (MQ=255)
                                       tcgttcgtTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCACCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCa                                                                                                                                                                                                                                          >  1:1025490/1‑288 (MQ=255)
                                              ttttttATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCgg                                                                                                                                                                                                                                            <  1:1422213/279‑1 (MQ=255)
                                                       cTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCAAGCTCCCGCGGAGCGATGGACTTCCAGCCCTCCGGCACTGTGGAATGGGTGcgg                                                                                                                                                                                                                         >  2:1068226/1‑287 (MQ=255)
                                                         gTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGTACAATCCTTGATTACGATAACGCATCGTTTAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGATGCAGGt                                                                                                                                                                                                                       >  1:306987/1‑289 (MQ=255)
                                                         gTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGt                                                                                                                                                                                                                       >  1:282143/1‑289 (MQ=255)
                                                         gTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCCCGTGTTCATCTGATGACATGGACAATCCTTAATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCCATGGACTTCCAACACCCCGGCATCGAGTACGTGGCGCAGGt                                                                                                                                                                                                                       >  2:1481878/1‑289 (MQ=255)
                                                          ttCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCcgcg                                                                                                                                                                                                                                                                     <  2:907824/242‑1 (MQ=255)
                                                          ttCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGtt                                                                                                                                                                                                                      >  1:135865/1‑289 (MQ=255)
                                                            cAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAACTGGTGCAGGtct                                                                                                                                                                                                                     >  1:1864472/1‑286 (MQ=255)
                                                                    aaaaaaGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATgg                                                                                                                                                                                                                                                            >  1:609120/1‑241 (MQ=255)
                                                                    aaaaaaGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACg                                                                                                                                                                                                             >  1:740552/1‑288 (MQ=255)
                                                                    aaaaaaGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGGTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCATCACTCCAGCAGCGAGGAAATGGTGCCGGGTTTCTGCACgg                                                                                                                                                                                                            >  2:1542664/1‑289 (MQ=255)
                                                                             cccTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCt                                                                                                                                                                                                   <  1:1233109/289‑1 (MQ=255)
                                                                                            aGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGAt                                                                                                                                                                                     <  1:895537/288‑1 (MQ=255)
                                                                                            aGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGATTTCTGCACGGACTCATGCTCCGGCCATAATGAtt                                                                                                                                                                                    >  1:807611/1‑289 (MQ=255)
                                                                                              gggCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTg                                                                                                                                                                                   <  2:209079/288‑1 (MQ=255)
                                                                                                       aCGAGCAAGCATCATATTGGGCGACATGATGCAAAGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCAc                                                                                                                                                                          <  1:1068226/288‑1 (MQ=255)
                                                                                                          agcaagcaTCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGAATGGAGCACCCCGATg                                                                                                                                                                      >  2:887403/1‑289 (MQ=255)
                                                                                                          agcaagcaTCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGAGTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATg                                                                                                                                                                      >  1:1645546/1‑289 (MQ=255)
                                                                                                            caagcaTCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCAAGGACTCCTGCTCCGGCCATATTGATTGGAGCATCACGATgg                                                                                                                                                                     >  1:1772598/1‑288 (MQ=255)
                                                                                                                    atatTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCATGAAGt                                                                                                                                                            >  1:1786355/1‑289 (MQ=255)
                                                                                                                     tatTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGt                                                                                                                                                            >  1:62330/1‑288 (MQ=255)
                                                                                                                     tatTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCCCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGAGCAATAAggt                                                                                                                                                           >  1:212698/1‑287 (MQ=255)
                                                                                                                          cccaatatgatgCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCAt                                                                                                                                                                                           >  2:801436/7‑252 (MQ=255)
                                                                                                                            cGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCa                                                                                                                                                                                                               <  1:480998/230‑1 (MQ=255)
                                                                                                                            cGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGa                                                                                                                                                                        <  2:183629/269‑1 (MQ=255)
                                                                                                                               cATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttt                                                                                                                                                 >  2:1322752/1‑289 (MQ=255)
                                                                                                                                 tgatgCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttttg                                                                                                                                               <  2:1567826/289‑3 (MQ=255)
                                                                                                                                    tgaaaCGGAAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCCTTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttttgat                                                                                                                                             <  2:808742/285‑5 (MQ=255)
                                                                                                                                    tgCAACGGTAAACATCATTTTGCCTGATGGCGTTAAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttttgat                                                                                                                                             <  2:62330/288‑5 (MQ=255)
                                                                                                                                    tgCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttttgat                                                                                                                                             <  1:1230184/288‑5 (MQ=255)
                                                                                                                                    tgCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAAtttttgat                                                                                                                                             <  2:1442422/288‑5 (MQ=255)
                                                                                                                                         cGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACg                                                                                                                                                                                                                                                                             <  2:1883111/155‑1 (MQ=255)
                                                                                                                                           gTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGGTTTCTGCACGGACTCCTGCACCGGCAATAATGAGTGAAGCATCACGATATGCAATAAGTACCATAAtttaggataaacctcg                                                                                                                                     >  2:1354952/1‑276 (MQ=255)
                                                                                                                                                     tttGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGACTACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGACGGGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATACTGATTGGAGCATCACGATGGGCAATAAGTTCCATACTTTTTGATAAACCTTGCATTGCg                                                                                                                              >  1:813316/1‑286 (MQ=255)
                                                                                                                                                      ttGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGAAATAAGTTCCATAATTTTTGATAAACCTTGCAGTTCggctg                                                                                                                          >  2:53988/1‑285 (MQ=255)
                                                                                                                                                               tGGCGTTCAATGATTCCGTTCATTTAAGCAACCGCCGCCCCGGCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGcc                                                                                                                 <  2:1645546/289‑1 (MQ=255)
                                                                                                                                                                  cGTTCAATGGTTCCTTTCATTTCAGCAACCGCCTGCCCGTCTACGATATAACGCAAATACTCGTCCGCGTGTTCATCTGATAACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccct                                                                                                               <  2:1786355/288‑2 (MQ=255)
                                                                                                                                                                   gTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccctg                                                                                                              <  2:282143/288‑3 (MQ=255)
                                                                                                                                                                    ttCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACg                                                                                                                                                                         <  2:1944424/228‑1 (MQ=255)
                                                                                                                                                                    ttCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCt                                                                                                                                       <  1:1880166/262‑1 (MQ=255)
                                                                                                                                                                    ttCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTTCAGTGCGTCTGATTTTTGccctgat                                                                                                            >  2:459884/1‑285 (MQ=255)
                                                                                                                                                                    ttCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccctgat                                                                                                            >  2:549319/1‑285 (MQ=255)
                                                                                                                                                                    ttCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccctg                                                                                                              >  2:295181/1‑285 (MQ=255)
                                                                                                                                                                       aaTTATTCCTTTCATTTCACCACCCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccctgatgtc                                                                                                         <  1:312267/289‑8 (MQ=255)
                                                                                                                                                                            ttCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccct                                                                                                               <  2:1502183/278‑2 (MQ=255)
                                                                                                                                                                            ttCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGccct                                                                                                               >  1:1502183/1‑277 (MQ=255)
                                                                                                                                                                                 ttcatttcaGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACg                                                                                                                                                                                                             <  2:836256/179‑1 (MQ=255)
                                                                                                                                                                                 ttcatttcaGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACg                                                                                                                                                                                                             >  1:836256/1‑179 (MQ=255)
                                                                                                                                                                                   catttcaGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCa                                                                                             <  1:1380961/289‑1 (MQ=255)
                                                                                                                                                                                         aGCAACCGCCGCCCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGccc                                                                                       >  1:182538/1‑289 (MQ=255)
                                                                                                                                                                                                gccgccCCGTCTACGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTcc                                                                                 >  2:37108/1‑288 (MQ=255)
                                                                                                                                                                                                            aCGATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGa                                                                    <  2:1608268/289‑1 (MQ=255)
                                                                                                                                                                                                              gATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgt                                                                  <  2:182538/289‑1 (MQ=255)
                                                                                                                                                                                                              gATATAACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgt                                                                  <  1:1920780/289‑1 (MQ=255)
                                                                                                                                                                                                                tataACGCGAATACTCGTCCTCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATGGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgtg                                                                 <  1:112660/288‑1 (MQ=255)
                                                                                                                                                                                                                tataACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgtg                                                                 <  1:253907/288‑1 (MQ=255)
                                                                                                                                                                                                                tataACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgtg                                                                 <  1:169689/288‑1 (MQ=255)
                                                                                                                                                                                                                tataACGCGAATACTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAgtg                                                                 <  1:549319/288‑1 (MQ=255)
                                                                                                                                                                                                                 ataacgcgaataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGta                                                               <  1:53988/280‑1 (MQ=255)
                                                                                                                                                                                                                   aacgcgaataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGGCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGtaaa                                                             >  1:1030465/8‑287 (MQ=255)
                                                                                                                                                                                                                   aacgcgaataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTCCAGTGCGTCTGATTTTTGCCCTGCTGTCAGTACCCGGGCAATGCCCCATTCCGCACAATTATTGAGTGtata                                                             >  2:112660/8‑289 (MQ=255)
                                                                                                                                                                                                                     cgcgaataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATCTTTGATAACACTTGCAGTGGGTCTGGTTTTTGCCATGATTTCAGTACCCGGGCAATGCCCAATTCCCGAATATTATTGATTTtatata                                                           >  2:1870791/6‑289 (MQ=255)
                                                                                                                                                                                                                       cgaataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTg                                                                     <  1:1536746/274‑1 (MQ=255)
                                                                                                                                                                                                                          ataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCTTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAggg                                                      >  2:1232128/1‑289 (MQ=255)
                                                                                                                                                                                                                          ataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCa                                                                              >  2:1392858/1‑265 (MQ=255)
                                                                                                                                                                                                                          ataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAggg                                                      >  2:1671589/1‑289 (MQ=255)
                                                                                                                                                                                                                          ataCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAggg                                                      >  1:1306951/1‑289 (MQ=255)
                                                                                                                                                                                                                            aCTCGTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGtt                                                    <  1:1179266/289‑1 (MQ=255)
                                                                                                                                                                                                                                gTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATACTGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGGGTATATAAAGGGTTAgc                                                 >  2:1265412/1‑288 (MQ=255)
                                                                                                                                                                                                                                gTCCGCGTGTTCATCTGATGACATGGACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAgc                                                 >  1:451040/1‑288 (MQ=255)
                                                                                                                                                                                                                                                        ggACAATCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTg                                                                     <  1:649144/244‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATaa                                                          >  1:72164/1‑249 (MQ=255)
                                                                                                                                                                                                                                                              tCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATaa                                                          <  2:72164/249‑1 (MQ=255)
                                                                                                                                                                                                                                                              tCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAgcg                                                >  2:494843/1‑259 (MQ=255)
                                                                                                                                                                                                                                                              tCCTTGATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAGCGCACATATCGAAGGCGCGATGAAAAGTc                     >  2:849443/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                   gATTACGATATCGCATTGGTGAAGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGTTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAGCGCACATATCGAAGGCGCGATGAAAAGTCACTGCCAg             <  2:1192559/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATa                                                                                                                                                                                          <  2:644003/116‑1 (MQ=255)
                                                                                                                                                                                                                                                                   gATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGcc                                                                                                                 >  1:656798/1‑189 (MQ=255)
                                                                                                                                                                                                                                                                   gATTACGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGcc                                                                                                                 <  2:656798/189‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cGATAACGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCa                                                                                             >  1:1273375/1‑204 (MQ=255)
                                                                                                                                                                                                                                                                              cGCATCGGTGAGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTTGATAAACCTTGCAGTGCGTCTGATTTTTGCCCTGATGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGTGTTAGCGCACATATCGAAGGCGCGATGAAAAGTCACTGCCAGCGGACCGgcc   >  1:1628151/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
CGCTATGCGCACTGTCACCCGCTCAACAGATCACGGTTATCGTTCGTTTTTTATACTGTTCAGGGATAAAAAAAGGCCCCTGTTGAAATTGCAGGGGCCTGGTACGAGCAAGCATCATATTGGGCGACATGATGCAACGGTAAAAATCATTTGGCCTGATGGCGTTCAATGATTCCTTTCATTTCAGCAACCGCCGCCCCGTCTACGATATAACGGCTATACTCGTCCGCGTGTTCATCACTACTCATGGACAATCCTTGATTACGATAACGCATCGGACTGGCTTGCCACGCTCCCGCGGAGCTATGGACTTCCAGCACTCCGGCATCGAGGAAGTGGTGCAGGTTTTCTGCACGGACTCCTGCTCCGGCCATAATGATTGGAGCATCACGATGGGCAATAAGTTCCATAATTTTACTTAAACCTTGCAGTGCGTCACTTTTTTGCCCACTTGTCAGTACCCGGGCAATGCCCAATTCCGCAAGATTATTGAGTGTATATAAAGGGTTAGCGCACATATCGAAGGCGCGATGAAAAGTCACTGCCAGCGGACCGGCAG  >  CP042583/1639122‑1639680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A