Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,675,696 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,675,696 | 0 | A | T | 100.0%
| 690.4
/ NA
| 289 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (161/128); total (161/128) |
| * | CP042583 | 1,675,697 | 0 | C | G | 100.0%
| 689.0
/ NA
| 289 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (161/128); total (161/128) |
| * | CP042583 | 1,675,698 | 0 | T | A | 99.7%
| 693.2
/ NA
| 289 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (161/127); minor base C (0/1); total (161/128) |
| Fisher's exact test for biased strand distribution p-value = 4.43e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 289 total aligned reads displayed.
ATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAAACTATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTA > CP042583/1675416‑1675973
|||
cAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCaa > 1:1517612/1‑289 (MQ=255)
atatCCTGACTAACATCCATCATCAGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTa > 1:1274476/1‑288 (MQ=255)
aCTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAg > 2:117163/1‑289 (MQ=255)
gTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACtt > 1:754249/1‑289 (MQ=255)
gTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACtt > 2:1684210/1‑289 (MQ=255)
aGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTgcg < 2:156415/289‑1 (MQ=255)
gTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCt > 1:1586367/1‑288 (MQ=255)
tGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGccc < 1:528444/216‑1 (MQ=255)
tGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCg > 2:1632778/1‑288 (MQ=255)
ggATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGccc > 1:437013/1‑215 (MQ=255)
tttACCCCATCACTTAACACCTGCTTTGTCTGCGCTTTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATCGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTc < 2:879541/289‑1 (MQ=255)
tACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa < 1:335313/289‑1 (MQ=255)
aCCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGaaaa < 1:1892926/245‑1 (MQ=255)
aCCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa > 1:1751616/1‑288 (MQ=255)
cTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCAt > 1:1553823/1‑191 (MQ=255)
cTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa < 1:385072/268‑1 (MQ=255)
cTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa > 2:385072/1‑268 (MQ=255)
cTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCaa > 1:30097/1‑289 (MQ=255)
acggatctCCGGTTAAGGTTGGTTACATCATTGGGCCCTTTTAACTCCCTTGCCAGGCCAGTATATAGGGACCAGACCATTCATGATCTAGCAACAGACAGTAGCAATATAAATAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTGGAt < 2:1274476/282‑1 (MQ=255)
cgcTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa < 2:508745/259‑1 (MQ=255)
cgcTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCa > 1:508745/1‑259 (MQ=255)
cgcTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGAtt > 1:1940873/1‑288 (MQ=255)
tCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCg > 2:442032/1‑247 (MQ=255)
tCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCa > 2:226787/1‑268 (MQ=255)
tCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCa < 1:226787/268‑1 (MQ=255)
tCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCaa > 2:1264286/1‑289 (MQ=255)
tCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTAACGCTACGAATGAATAGCCCATCCCCAGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCCACTTTTGCGAGGAGCCTGAGAATGGCGACGGCCACCGTATTGGTATCACATTCAAAGTTGATTCCCCaa > 2:589314/1‑289 (MQ=255)
gAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATc > 1:1343837/1‑257 (MQ=255)
tgttgtATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGt < 1:1700526/245‑1 (MQ=255)
tATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAAc > 2:1039753/1‑288 (MQ=255)
atcatcGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAAcc < 2:1586367/288‑1 (MQ=255)
catcGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGtt < 2:1238671/289‑1 (MQ=255)
accacccATTTCAAATCACTTGCCAGGCCATTATAGAGAATCCAGACAATTCCGGCGCCAACAACAGACAGTAGCAAAATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCt < 1:1470178/284‑1 (MQ=255)
gcgcCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTgg > 1:992329/1‑289 (MQ=255)
cgcCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGt > 2:1073025/1‑238 (MQ=255)
cgcCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGt < 1:1073025/238‑1 (MQ=255)
cgcCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTggg > 1:446964/1‑289 (MQ=255)
cgcCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTggg > 1:430249/1‑289 (MQ=255)
ccATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCACCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGta > 1:1980388/1‑289 (MQ=255)
tttCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAACTTTCACTCGCAATAACCGTTCTGGGTATaa > 2:1353764/1‑289 (MQ=255)
aCTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAg < 2:1751616/289‑1 (MQ=255)
ttGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGct < 1:1264286/289‑1 (MQ=255)
aGGCCATTATAGAGAGTCCAGAAAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGa < 2:1333618/289‑1 (MQ=255)
gCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAg > 1:1253054/1‑288 (MQ=255)
ccATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCGACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTAACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAgg > 1:1219680/1‑288 (MQ=255)
ccATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGa < 1:250685/286‑1 (MQ=255)
agTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCaaa > 2:353864/1‑289 (MQ=255)
tCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCAc < 1:1031858/233‑1 (MQ=255)
tCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGt > 1:1842020/1‑289 (MQ=255)
tCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGt > 2:148600/1‑289 (MQ=255)
tCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCCCTGGAGGCCAGTAGCCAAAGt > 2:937970/1‑289 (MQ=255)
ccAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGt < 1:1423686/288‑1 (MQ=255)
tCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAAc > 1:1172062/1‑288 (MQ=255)
tCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCACCCCTGGAGGCCACTAGCCACAGTAACTGAAAc > 2:1315736/1‑288 (MQ=255)
aacgtacagTAGCAATATAAAAAGCAAGGTTAAACGGACTGTTATCGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCACCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt < 2:1980388/282‑1 (MQ=255)
aaCAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt < 1:1310221/287‑1 (MQ=255)
aaCAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGAGTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACGTTTGCGCGGAGCCTGCGAATGGCGACTTACACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCa < 2:1517612/289‑1 (MQ=255)
agacagTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtg < 1:805632/289‑1 (MQ=255)
agTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAAt < 2:1701259/289‑1 (MQ=255)
tAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAAt > 1:1081372/1‑287 (MQ=255)
aGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAgtgt < 2:69383/283‑1 (MQ=255)
actataaagaaagGTTAACCGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGatat < 2:399046/284‑1 (MQ=255)
aaaGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc < 1:178203/289‑1 (MQ=255)
aaaGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc < 2:1940873/289‑1 (MQ=255)
aGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGAGTCAGTGTAATACTGATATTGTc > 2:479860/1‑286 (MQ=255)
aaGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGc > 1:1675520/1‑288 (MQ=255)
aaGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt < 1:558697/289‑1 (MQ=255)
aaGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCt < 1:1039753/289‑1 (MQ=255)
ttAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTcaca < 2:1439367/289‑1 (MQ=255)
ttAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTca < 1:945942/287‑1 (MQ=255)
aaaCGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt < 2:430249/289‑1 (MQ=255)
aaaCGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt < 2:1081372/289‑1 (MQ=255)
aaaCGGACGGTGTAAGATAGTCTTTTCATTATTTTGTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt < 2:1835412/289‑1 (MQ=255)
aaCGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTcaca > 2:1553004/1‑286 (MQ=255)
aaCGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTa > 2:900278/1‑289 (MQ=255)
cggTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc > 2:60180/1‑271 (MQ=255)
cggTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc < 1:60180/271‑1 (MQ=255)
ttATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAAc < 1:1134125/288‑1 (MQ=255)
agTCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACt > 2:1024836/1‑271 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCt > 2:660217/1‑176 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGa < 2:981350/222‑1 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTg < 2:793145/231‑1 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt > 1:1159329/1‑236 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt > 2:774459/1‑236 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGt < 2:1139163/236‑1 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATa < 1:1012909/246‑1 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc > 1:790947/1‑258 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTcc > 2:280929/1‑258 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGAc < 1:680503/274‑1 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 1:477693/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 2:621569/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 2:1192112/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 1:182739/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 1:1545455/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 1:724666/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATCGTCCCTGCTCACACTATGACTAACAGAGACCAt > 1:160721/1‑287 (MQ=255)
tCTTTTCATTATTTTTTTACCGCCACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCAt > 2:1905706/1‑287 (MQ=255)
ttCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTaa > 1:1393891/1‑289 (MQ=255)
tCATTATTTTTTTACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTaa > 2:541780/1‑288 (MQ=255)
ttACCGCTACGAATGAATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGAtt > 2:1290159/1‑287 (MQ=255)
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ATGCTATCACCATGAATAATCAAGATATCCTGACTAACATCCATCATCCGGTTAAAGTACACAGGTAACGTATCTGGATTTACCCCATCAATTAACAACTGCTTGATCTGCGCTGTCCGGTTAATGAGTGTTGTATCATCGCGCCATTTCAACTCACTTGCCAGGCCATTATAGAGAGTCCAGACAATTCCGGCGCCAGCAACAGACAGTAGCAATATAAAAAGCAAGGTTAAACGGACGGTTATAGATAGTCTTTTCATTATTTTTTTACCGCTACGAAACTATAGCCCATCCCCCGGATTGTGGCAATTAGCTTTTCAGGAAAAGGATCATCAACTTTTGCGCGGAGCCTGCGAATGGCGACGTCCACCGTATTGGTATCACTATCAAAGTTGATTCCCCAAATTTCACTCGCAATAACCGTTCTGGGTATAATTTCGCCAGCTCTGGAGGCCAGTAGCCAAAGTAACTGAAACTCCTTGCGCGTCAGTGTAATACTGATATTGTCCCTGCTCACACTATGACTAACAGAGTCCATTCTTAAGCCGCTGATTTCTA > CP042583/1675416‑1675973
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
