Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,970,527 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,970,5270GC99.3% 672.9 / ‑6.5 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (150/138);  total (150/141)
Fisher's exact test for biased strand distribution p-value = 2.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01
*CP0425831,970,5280CG99.7% 683.5 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (149/141);  total (150/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,970,5290TA99.3% 682.9 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (148/141);  minor base C (2/0);  total (150/141)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 291 total aligned reads displayed.

GCGCGCTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTGCTCTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGG  >  CP042583/1970248‑1970806
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
gcgcgcTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCGCTTTCTTCGACTGACGc                                                                                                                                                                                                                                                                                <  2:1157906/289‑1 (MQ=255)
gcgcgcTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGc                                                                                                                                                                                                                                                                                <  2:1257911/289‑1 (MQ=255)
  gcgcTTTACCTTTCCCAGCCGGACCCACTGCCAGCGCGCCGCCCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAg                                                                                                                                                                                                                                                                              <  2:196923/289‑1 (MQ=255)
  gcgcTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCC‑CGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAg                                                                                                                                                                                                                                                                              <  1:1528812/288‑1 (MQ=255)
        tACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAata                                                                                                                                                                                                                                                                          >  1:1220180/1‑287 (MQ=255)
            gttCACAGCCTGCCGCACTGCCAGCGCGACGCGGGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGcc                                                                                                                                                                                                                                                                    <  2:1721328/288‑1 (MQ=255)
                ccaGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCgcgc                                                                                                                                                                                                                                                                <  2:111783/288‑1 (MQ=255)
                ccaGCCCGCCGGACTGCCAGCGCGACGCGCGCGGCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCATTACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCgcgc                                                                                                                                                                                                                                                                <  2:1241758/288‑1 (MQ=255)
                acaGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCcgcg                                                                                                                                                                                                                                                                 >  2:460529/1‑288 (MQ=255)
                    ccTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGcc                                                                                                                                                                                                                                                                    <  2:1430109/281‑1 (MQ=255)
                    ccTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCt                                                                                                                                                                                                                                                             >  1:1958782/1‑288 (MQ=255)
                     cTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGc                                                                                                                                                                                                                                                           <  1:175376/289‑1 (MQ=255)
                          gCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGc                                                                                                                                                                                                                                                      <  1:1449134/289‑1 (MQ=255)
                              tGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGc                                                                                                                                                                                                                                                      <  2:1066503/285‑1 (MQ=255)
                                 cAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCCTCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               <  2:589764/289‑1 (MQ=255)
                                      cgACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTGTCAGCGCCAGTTGCAGGCGTTCCTGCTCACCGTGACCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAACGTTGCTTTCCACCCTGGCACGCGGATAACCAATACCGGTCACTTTCTTCGACTGACGCAGAAAATCCGCCGCCCCCCGCATTGACTGGTCGGctgt                                                                                                                                                                                                                                          >  2:981204/1‑286 (MQ=255)
                                        aCGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCCTTGCCTGTCCGGCGTTgt                                                                                                                                                                                                                                        >  2:1693079/1‑288 (MQ=255)
                                        aCGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGa                                                                                                                                                                                                                                        >  1:350705/1‑289 (MQ=255)
                                                                 cTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               <  1:313169/289‑1 (MQ=255)
                                                                 cTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATGTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               <  1:1640659/289‑1 (MQ=255)
                                                                   tCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgac                                                                                                                                                                                                                >  2:762896/1‑286 (MQ=255)
                                                                          gCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGCCTGACGCCGAATATCTGCCGCGCCCTGCATTTCCTGTTTGGCGTTGAGGGTAATGGAATCATCGCCACGTCGCCGTACTgg                                                                                                                                                                                                      >  2:474763/1‑289 (MQ=255)
                                                                                 tACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               >  1:170132/1‑273 (MQ=255)
                                                                                 tACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               <  2:170132/273‑1 (MQ=255)
                                                                                     gCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTTGGGGTAATGAAATCATCGCCACGACGCTGTCCTGGCTCACGCggcc                                                                                                                                                                                           >  2:1746830/1‑287 (MQ=255)
                                                                                     gCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCggg                                                                                                                                                                                            >  1:987886/1‑287 (MQ=255)
                                                                                     gCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGAc                                                                                                                                                                                           >  2:941543/1‑289 (MQ=255)
                                                                                     gCATCGTAAGATTCGATTGCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCGTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGAc                                                                                                                                                                                           <  2:1600275/289‑1 (MQ=255)
                                                                                      cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCTCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACg                                                                                                                                                                                          >  2:1276416/1‑289 (MQ=255)
                                                                                      cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               <  1:921178/236‑1 (MQ=255)
                                                                                      cATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               >  2:921178/1‑236 (MQ=255)
                                                                                        tCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAACCATCGCCACGACGACGTACTGGCTGACGCGGACgc                                                                                                                                                                                         >  2:1765832/1‑287 (MQ=255)
                                                                                           tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCt                                                                                                                                                                                     >  1:1820397/1‑289 (MQ=255)
                                                                                           tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCt                                                                                                                                                                                     >  1:832486/1‑289 (MQ=255)
                                                                                           tAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCt                                                                                                                                                                                     >  1:408977/1‑289 (MQ=255)
                                                                                                 tCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt                                                                                                                                                                               <  1:938576/289‑1 (MQ=255)
                                                                                                 tCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGt                                                                                                                                                                               <  1:624204/289‑1 (MQ=255)
                                                                                                   gATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGCGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGCGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCTCCCTGCATTGCCTGTTCGGCGTCGAGGGTAATGAAATCATCGCCACGACGCTCGACTGGAGTACGCGGACGATCCGTCacggt                                                                                                                                                                              >  2:1471344/1‑284 (MQ=255)
                                                                                                        cgcgCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgac                                                                                                                                                                                                                >  2:1674336/1‑249 (MQ=255)
                                                                                                              gggcgggAGTATAAATGCCGCCTTAACACAGCACTTTCGGCGCCAGGTGCAGACGTTCCTGACAACCGTGAGCGATACCGGTGTAGAAGTTGTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGAcgtaaccgt                                                                                                                                                                   <  2:1870061/283‑1 (MQ=255)
                                                                                                                         taAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGa                                                                                                                                                        >  1:129589/1‑288 (MQ=255)
                                                                                                                                cgccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGt                                                                                                                                                 <  1:1914330/288‑1 (MQ=255)
                                                                                                                                 gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               >  2:416774/1‑193 (MQ=255)
                                                                                                                                 gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               <  2:716269/225‑1 (MQ=255)
                                                                                                                                 gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTc                                                                                                                                                >  2:562787/1‑288 (MQ=255)
                                                                                                                                 gccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGAGCCTTCAGGTTTACGTAACCGTAACCGAACAGCCCACGGTc                                                                                                                                                >  2:1077777/1‑288 (MQ=255)
                                                                                                                                  ccTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGc                                                                                                                                              <  1:356876/289‑1 (MQ=255)
                                                                                                                                              aCTTTCCGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGACGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTTACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAagtag                                                                                                                                   <  1:382758/288‑1 (MQ=255)
                                                                                                                                               cTTTCAGCGCCAGTTGCCGGCGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTg                                                                                                                                 <  2:1492049/289‑1 (MQ=255)
                                                                                                                                                 ttaacggcgacgtGCAGACGTTCCTGCTGCACGGGCTTGATACGTGTGTAGCAGTGTTACTGGCCGACCAGGTCACCCAGCGCAAAGTTGCTTACCACGCTGGCACGCGGAGAACCAATACCGAGCTCTTTCTGCGAGTGACGCAGTATATCTGCCTCGCCCTGCTTTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGt                                                                                                                               <  2:796477/277‑1 (MQ=255)
                                                                                                                                                  tCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGtt                                                                                                                              <  1:1693079/289‑1 (MQ=255)
                                                                                                                                                     gcgcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGAGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACCATCCTTCAGGTTGACGGCACAGTAACCGAAAAGACCACGGTCGCAGAGGAAGTAGTgctggc                                                                                                                            >  2:1340793/1‑283 (MQ=255)
                                                                                                                                                       gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               >  2:552357/1‑171 (MQ=255)
                                                                                                                                                       gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCg                                                                                                                                                                                                                                               <  1:552357/171‑1 (MQ=255)
                                                                                                                                                       gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccg                                                                                                                         >  1:1595106/1‑289 (MQ=255)
                                                                                                                                                       gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccg                                                                                                                         >  1:1777982/1‑289 (MQ=255)
                                                                                                                                                       gcCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTta                                                                                                                            <  1:472585/286‑1 (MQ=255)
                                                                                                                                                         cAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCacgacg                                                                                                                                                                                                               >  1:961129/1‑201 (MQ=255)
                                                                                                                                                          cagtccAGACGTTCCTGCGACCCGTGGGCGATACCGGTGGAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccgtac                                                                                                                      <  2:694589/284‑1 (MQ=255)
                                                                                                                                                          aGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccgta                                                                                                                       >  1:1997111/1‑288 (MQ=255)
                                                                                                                                                                               ccGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATac                                                                                                 >  1:1734529/1‑289 (MQ=255)
                                                                                                                                                                                cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCTAAACGACCACGGTCGCAGAGGACGCAGTGGTTTACCGTACCGGTGTAACGGTTTTAGATacg                                                                                                >  2:21315/1‑289 (MQ=255)
                                                                                                                                                                                cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATacg                                                                                                >  1:1120281/1‑289 (MQ=255)
                                                                                                                                                                                cGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATacg                                                                                                >  1:1269136/1‑289 (MQ=255)
                                                                                                                                                                                  tGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGGAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATacgac                                                                                              >  1:1015722/1‑289 (MQ=255)
                                                                                                                                                                                     gCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAAAGGTTTTCGATACGACGCa                                                                                           >  1:1348317/1‑289 (MQ=255)
                                                                                                                                                                                      cGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCa                                                                                           <  1:507084/288‑1 (MQ=255)
                                                                                                                                                                                       gATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGATGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCa                                                                                           <  1:336556/287‑1 (MQ=255)
                                                                                                                                                                                        aTACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTg                                                                                                                                 >  1:18635/1‑248 (MQ=255)
                                                                                                                                                                                         tACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGtt                                                                                        <  1:1036524/288‑1 (MQ=255)
                                                                                                                                                                                          aCCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGc                                                                                                                                              >  1:1423517/1‑233 (MQ=255)
                                                                                                                                                                                              gtgtAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGt                                                                                  >  2:393799/1‑289 (MQ=255)
                                                                                                                                                                                                   gAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGACAGAGTGGCTTACCGTACCGTTGTAACGGTTTTCTATACGACGAAGGTCGCCGTAACGt                                                                             >  2:1953619/1‑289 (MQ=255)
                                                                                                                                                                                                         ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCaga                                                                                                                                           >  1:1769654/1‑221 (MQ=255)
                                                                                                                                                                                                         ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCg                                                                       >  2:272117/1‑289 (MQ=255)
                                                                                                                                                                                                         ttcttcGCCCACCAGTTCACGCAGCGCAAAGTTGATTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGAAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCg                                                                       >  1:772217/1‑289 (MQ=255)
                                                                                                                                                                                                            ttcGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCgggg                                                                    <  1:731294/289‑1 (MQ=255)
                                                                                                                                                                                                               gCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTg                                                                 <  2:514398/289‑1 (MQ=255)
                                                                                                                                                                                                                         tCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACa                                                         <  2:1773949/287‑1 (MQ=255)
                                                                                                                                                                                                                                 cgcAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGaa                                                                                                                                                            <  1:576561/180‑1 (MQ=255)
                                                                                                                                                                                                                                 cgcAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTtaccgtacc                                                                                                                     >  1:1482453/1‑219 (MQ=255)
                                                                                                                                                                                                                                  gcAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATa                                                                                                  >  2:1847532/1‑237 (MQ=255)
                                                                                                                                                                                                                                    aaaGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACa                                             <  2:342765/288‑1 (MQ=255)
                                                                                                                                                                                                                                           cTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTGGTGGTTTACCGTCCCGTTGTAACGGTTTTCGATACGACGCACTTCGCCGTAACGTTCCCCGGGGCTGATGTTACAGCCGATGGAACATTGCTgg                                      >  2:873959/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         aCGCGGAGAACCAATACCTGTCACTTTCTTAGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCa                       <  2:318523/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         aCGCGGAGAACCAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCa                       <  1:455494/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    cAATACCGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATc            <  1:794734/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ccGATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCAtt       <  2:352991/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTTGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGCAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTCCCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACTGGGGCTGAGTGTACAGCCGACGGAGCATTGCTGGCCGATGCTCGGCGCAAACTGTGTAGCCCCttt      >  2:1139599/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACa                                                         <  2:1753875/237‑1 (MQ=255)
                                                                                                                                                                                                                                                                           gATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCAttt      >  2:1917059/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCAttt      >  1:1908402/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           gATCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTa     <  2:1908402/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGtt                                                                                                                                                                                                                                                 <  2:376676/52‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCa                                                                                                                                             <  1:704198/152‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTAc    >  1:434517/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTAc    >  1:1134273/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTAc    >  1:688840/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            aTCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACAGTGCTTGCAGATGCTCGGCGCAAACTGCATATTCCATTTAc    >  1:581143/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             tCACTTTCTTCGACTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTAc    <  2:733647/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
GCGCGCTTTACCTTTCACAGCCTGACGCACTGCCAGCGCGACGCGCGCGCCGGTCTGGGTAACGTCTTCGCCCAGCACCAGTACCGCATCGTAAGATTCGATTTCGCGCAGAGCCGGAGTATAAATGCCGCCTTCACGCAGCACTTTCAGCGCCAGTTGCAGACGTTCCTGCTCACCGTGAGCGATACCGGTGTAGAAGTTTTCTTCGCCCACCAGTTCACGCAGCGCAAAGTTGCTTTCCACGCTGGCACGCGGAGAACCAATACCGATCACTTTCTTGCTCTGACGCAGAATATCTGCCGCGCCCTGCATTGCCTGTTCGGCGTTGAGGGTAATGAAATCATCGCCACGACGCTGTACTGGCTGACGCGGACGATCCTTCAGGTTGACGTAACCGTAACCGAAACGACCACGGTCGCAGAGGAAGTAGTGGTTTACCGTACCGTTGTAACGGTTTTCGATACGACGCAGTTCGCCGTAACGTTCACCGGGGCTGATGTTACAGCCGATGGAACATTGCTGGCAGATGCTCGGCGCAAACTGCATATCCCATTTACGG  >  CP042583/1970248‑1970806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A