Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 473,548 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583473,5480GC98.6% 680.2 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (133/154);  minor base T (4/0);  total (137/154)
Fisher's exact test for biased strand distribution p-value = 4.80e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583473,5490CG99.3% 678.8 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (134/154);  minor base T (2/0);  total (137/154)
Fisher's exact test for biased strand distribution p-value = 2.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP042583473,5500TA99.3% 674.4 / NA 291intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (133/154);  minor base C (2/0);  total (137/154)
Fisher's exact test for biased strand distribution p-value = 2.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 291 total aligned reads displayed.

TATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCGTGACCGTGGCCTGGCATCA  >  CP042583/473271‑473822
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                  
   cGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTg                                                                                                                                                                                                                                                                        <  2:1296577/289‑1 (MQ=255)
              ttCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGc                                                                                                                                                                                                                                                            <  1:400374/289‑1 (MQ=255)
                    aTTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGAAATCCTCAATACGCTCCATCATATGGTTGAACAGAAGGACCAGCTGTTCCAACCC‑AATGGGCACGGTCTGCGGGTCGAGGGGAAGCTGCGGGTCTTTCGAGGTAATATTCTGGATTTgcagggtcgc                                                                                                                                                                                                                                                         >  2:1312177/1‑278 (MQ=255)
                            taGCTCTTCTATATTAGATTAGAGCACATCATCCAGCTCCTTCTGGCTGTGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGAt                                                                                                                                                                                                                                               <  1:808696/287‑1 (MQ=255)
                            cAGCTCTTCGATGTTAGAGTAGCGCAAACGTGCCAGCTCCTTGTGGCTGCGCGGCTTGGTGAGGGCGATGTCGGTTTGCGTTATGAGATTCGGAAGTGGTGTGCGAAGTTCGTGAGCGATATCCGCTGAGAAATGGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGAt                                                                                                                                                                                                                                               <  2:501014/288‑1 (MQ=255)
                            cAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGAt                                                                                                                                                                                                                                               <  1:2254173/288‑1 (MQ=255)
                            cAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGAt                                                                                                                                                                                                                                               <  1:150255/288‑1 (MQ=255)
                             tgttctTAGAGTTTTGAGTAGAGCATATCTTCCAGTTCGTTCTGGCGGCGCGAGTGGCTGAGGGAGATTTCGGTTTGAGTGATGAGATTCGTAATTGGTGGGCGAATTTCGTGAGCGCTATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCTTCAATACGCTCGATCATATGGTTGAACGACAGTACAAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATc                                                                                                                                                                                                                                              <  2:185129/285‑1 (MQ=255)
                                  ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGcgcg                                                                                                                                                                                                                                        <  1:2266603/289‑1 (MQ=255)
                                   tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                                                                                       <  1:1764701/289‑1 (MQ=255)
                                   tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCACTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                                                                                       <  2:346713/289‑1 (MQ=255)
                                   tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATGTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                                                                                       <  1:1142712/289‑1 (MQ=255)
                                    cGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGGTGAAAGACAGTACCAGCTGTTCCAGCTC‑AATGGCGACGGTCTGCGGGTCGAGGCGAACGTTGAGATCTTTCGAGGTAAGATTTTGTATTTGGC‑GGCTGACGCTGCGGGTCGGCGCGTg                                                                                                                                                                                                                                      >  2:2341460/1‑289 (MQ=255)
                                      ggaTTGGAGTAGGGCAAATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGa                                                                                                                                                                                                                                     <  2:97010/287‑1 (MQ=255)
                                         ttAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATGTCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCtt                                                                                                                                                                                                                                 >  2:2357211/1‑289 (MQ=255)
                                         ttAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCt                                                                                                                                                                                                                                  <  1:2700253/288‑1 (MQ=255)
                                            gagtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGCTCCTATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCCCGGTCTGCGGGTCGAGGCGCACGACGAGCGCTTTCTGGGTAATATTCTGTGTTTGAC‑GGTGGCTCCTGCGGATCGGggcgcgcccctttt                                                                                                                                                                                                                              >  2:1435922/1‑279 (MQ=255)
                                            gagtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGcgcg                                                                                                                                                                                                                                        <  1:1267710/279‑1 (MQ=255)
                                              gtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTAt                                                                                                                                                                                                                              <  1:1430106/287‑1 (MQ=255)
                                                agagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑t                                                                                                                                                                                                                           <  1:670290/287‑1 (MQ=255)
                                                  agCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAAACATCCTCAATACGCTCGCTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑ACTTGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGGACTTTTGAGGTAATATTCTGGGTTTGAC‑GGGTGACGCTGCGGATTGGCGCGTGACCGTTATG‑TAcc                                                                                                                                                                                                                        >  2:628808/1‑288 (MQ=255)
                                                     acaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGcc                                                                                                                                                                                                                     <  1:628808/288‑1 (MQ=255)
                                                      caTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTTAC‑GGCTGAACGTGGGGAACCGCGGGTGACCTTTaaggtgtctctt                                                                                                                                                                                                                    >  2:1267710/1‑278 (MQ=255)
                                                       aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAAc                                                                                                                                                                                                                  >  1:990594/1‑289 (MQ=255)
                                                       aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCCGTTCCAGCTC‑AATGGGCACGGTCCGCGGGGCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCGGCGGTTTGTGGCGTGACCTTTATG‑TTCCGCCAAc                                                                                                                                                                                                                  >  1:153021/1‑289 (MQ=255)
                                                       aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCCCGATCATATGGTTGAACGACAGTACCCGCTGTTCCAGCCC‑AATGGGCACCGTCTGCGGGTCGACGGGAACGTCGAGAACTTTCGAGGTAACATTTTGGATTTGAC‑GGCTTGCCCTTGGGATCCGGGCGTGACCTTTTTG‑TACCGccca                                                                                                                                                                                                                   >  2:1119490/1‑286 (MQ=255)
                                                         cTTCCAGCTCCTTCTGGCTGCGCGCCTGGCTGAGGGCGATTTCGGTTTGCGTTATGGGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAg                                                                                                                                                                                                                <  1:740719/289‑1 (MQ=255)
                                                         cTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCCCGAACAAATGGTTGAACGACAGTACCAGCTGGTCCAGCCCAAATGGCCAC‑GTCCGCGGGTGGCGGGGAACGTCGAGGACTTTCGAGGTAAAATTCTGGATTTGAC‑GGCGTGCGCTGCGGATGGGCGCGGGACCTTTTTGTTACCGCCacag                                                                                                                                                                                                                 >  2:2704085/1‑286 (MQ=255)
                                                                 tCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTGAAGACAACCCCAACACGCTCGATCAAATGGTTGAACGGCAGCATCAGCTGTTCCAGCCC‑AATGGGCCCGGCCCGCGGGTCGACGCGAAAGCAATGAGCTTTCGCGGCAATATTCCTGATTTGAC‑GGCTGCCCCTGCGGATCGGAGCGGGACCTTTATT‑TACCGGCAAACGTAAGATaa                                                                                                                                                                                                        >  2:2472299/1‑289 (MQ=255)
                                                                   cTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGGTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGGAATATTTTGGGTTTGGC‑GGCTGAGGCTGCGGGTGGGCGCGGGAGCTTTATG‑TACCCCCAACAGTACGATa                                                                                                                                                                                                         >  2:2080266/1‑286 (MQ=255)
                                                                     tCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGAc                                                                                                                                                                                                    <  2:403719/289‑1 (MQ=255)
                                                                     tCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGAc                                                                                                                                                                                                    <  2:663674/289‑1 (MQ=255)
                                                                        ggCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATGTCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGAt                                                                                                                                                                                                 <  1:2357211/289‑1 (MQ=255)
                                                                            ggtcgatgggCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTGATTGGTGTGCGAATTTCGTGGGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACCTCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                                                                             <  2:1553288/281‑1 (MQ=255)
                                                                            gcgcgactGGCTGAGGTCGTTTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATGTCGTGAGCGATATCCGCTGAGAAATTGGACTGGGGGGTAACGACATCCTAAATACGATCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                                                                             <  2:2257693/283‑1 (MQ=255)
                                                                             cgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                                                                             <  1:1782871/283‑1 (MQ=255)
                                                                             cgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATCCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                                                                             <  1:1004969/283‑1 (MQ=255)
                                                                                          gggCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCCC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGGAATATTCTGGATTTGAC‑GGCTGACGCCGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGAACAGGATGCTGCTTAccg                                                                                                                                                                                >  1:252800/1‑286 (MQ=255)
                                                                                             cGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgat                                                                                                                                                                              <  1:144862/288‑5 (MQ=255)
                                                                                             cGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatg                                                                                                                                                                             <  1:1312177/288‑6 (MQ=255)
                                                                                             cGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatg                                                                                                                                                                             <  1:1224866/288‑6 (MQ=255)
                                                                                                      tttGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCataa                                                                                                                                                                    <  1:240540/288‑1 (MQ=255)
                                                                                                                        tAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAAt                                                                                                                                                  <  2:1173570/288‑1 (MQ=255)
                                                                                                                         aaTTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGCTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGGCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGAACGGCCCGTGCCCTTTATT‑TACCGCCAACAGTACGATAAAGACGAACAGGATGCTGATTTCCTCAGCGGGCATAAAAAGTTGATTAATCaaaaaa                                                                                                                                                >  2:2565173/1‑286 (MQ=255)
                                                                                                                                     aaTTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATg                                                                                                                                     <  1:498348/288‑1 (MQ=255)
                                                                                                                                                           gagAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagcg                                                                                                              <  1:654353/287‑9 (MQ=255)
                                                                                                                                                            agAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAg                                                                                                                                                                                                                <  1:2473463/189‑1 (MQ=255)
                                                                                                                                                                     aCTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCTAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTaga                                                                                                     <  1:1476839/288‑1 (MQ=255)
                                                                                                                                                                     aCTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTaga                                                                                                     <  1:1838694/288‑1 (MQ=255)
                                                                                                                                                                        ggCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGcgcg                                                                                                                                                                                                                                        >  1:2695906/1‑155 (MQ=255)
                                                                                                                                                                                   aCATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCAt                                                                                                                                               <  1:1682829/232‑1 (MQ=255)
                                                                                                                                                                                       ccTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGt                                                                                                                                                                         >  1:2130911/1‑202 (MQ=255)
                                                                                                                                                                                       ccTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGt                                                                                                                                                                         <  2:2130911/202‑1 (MQ=255)
                                                                                                                                                                                       ccTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTTcc                                                                                  >  1:1284861/1‑289 (MQ=255)
                                                                                                                                                                                             tACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaa                                                                                                                 >  1:1971345/1‑247 (MQ=255)
                                                                                                                                                                                             tACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaa                                                                                                                 <  2:1971345/252‑6 (MQ=255)
                                                                                                                                                                                                  tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGGTCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCaa                                                                                                                                                                                                                   >  1:2083673/1‑149 (MQ=255)
                                                                                                                                                                                                  tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTa                                                                                                                                                            <  1:453556/204‑1 (MQ=255)
                                                                                                                                                                                                  tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACg                                                                       >  2:911505/1‑289 (MQ=255)
                                                                                                                                                                                                    gATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTACACCAACgg                                                                      >  1:2579146/1‑288 (MQ=255)
                                                                                                                                                                                                     aTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCAt                                                                                                                                               <  2:761287/214‑1 (MQ=255)
                                                                                                                                                                                                     aTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGc                                                                                   <  2:1489413/274‑1 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  1:1722023/7‑289 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  2:864341/7‑289 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  1:923771/7‑289 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  2:2621348/7‑289 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  2:470551/7‑289 (MQ=255)
                                                                                                                                                                                                                gaacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGAAGAGCGTAAAAATCGGTTTTCCGTCCACCAACGGGCCAACCGGCAAg                                                         >  2:280229/7‑289 (MQ=255)
                                                                                                                                                                                                                 aacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                                                                             <  1:408027/151‑1 (MQ=255)
                                                                                                                                                                                                                 aacgacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTGATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAgcgc                                                                                                             <  1:200212/231‑1 (MQ=255)
                                                                                                                                                                                                                    gacAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTaa                                                     <  1:864341/287‑1 (MQ=255)
                                                                                                                                                                                                                      cAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTagag                                                                                                    <  1:2637554/240‑1 (MQ=255)
                                                                                                                                                                                                                           ccAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGGTAATCATcc                                               >  2:332710/1‑288 (MQ=255)
                                                                                                                                                                                                                            cAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGc                                             <  1:272498/289‑1 (MQ=255)
                                                                                                                                                                                                                                tggtCCAGCTC‑AATGGGCACGGGCTGCGGGTGGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAg                                          <  2:1085339/285‑1 (MQ=255)
                                                                                                                                                                                                                                tGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAg                                          <  1:1615807/288‑1 (MQ=255)
                                                                                                                                                                                                                                 gTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGtt                                        >  1:1916384/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ttCCAGCTC‑AATGGGCACGGTCGGCGGGTCGATGCGAACGTCGAGATCTTTCGATGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCAAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTg                                       <  1:1034091/289‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATg                                                                                                                                     <  2:1639328/194‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCACCCGGCAAGTTAATCATCCGCCAGtt                                        >  2:2046759/1‑287 (MQ=255)
                                                                                                                                                                                                                                   tCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTg                                       <  2:2642595/288‑1 (MQ=255)
                                                                                                                                                                                                                                   tCCAGCAC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGACGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTg                                       >  1:2467865/1‑288 (MQ=255)
                                                                                                                                                                                                                                        cTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTATCATTCTGGATTTGAC‑GGCTGCCGCTGCGGATCGGCGCGGGCCCTTTATG‑TACCGCTAACGGTACGATAAATACGATCAGGGTGCTGATTACCGATGCGGGCATTACAAGTTTAATCAACAATACATTTATGTAAGGAAGATGAAAATCGATCGAAAGGGCGAAGTAGAGCGGAAAAATCGGTTTGCCCTTCCACAACCGGACAATCAGCACGCTAATACTCCGCCACttttcgagt                                 >  2:1210334/1‑282 (MQ=255)
                                                                                                                                                                                                                                         tC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCtgtg                                  <  1:1338267/287‑1 (MQ=255)
                                                                                                                                                                                                                                          tgaaTGGGCACGGTTTGCGGGTCGAGGCGAACGTCGAGATCGTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACGTTTATG‑TACAGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCtgtg                                  <  2:1762147/285‑1 (MQ=255)
                                                                                                                                                                                                                                             aTGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCataa                                                                                                                                                                    >  1:2067382/1‑154 (MQ=255)
                                                                                                                                                                                                                                             aTGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTTCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTCCCGGGTTCCa                             >  2:1351201/1‑289 (MQ=255)
                                                                                                                                                                                                                                              tGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCat                            <  1:2141323/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   aCGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagcg                                                                                                              <  2:1527872/202‑9 (MQ=255)
                                                                                                                                                                                                                                                      gTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCat                            <  1:1197325/281‑1 (MQ=255)
                                                                                                                                                                                                                                                           cGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCg                     <  1:2179741/283‑1 (MQ=255)
                                                                                                                                                                                                                                                           cGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCg                     >  2:2179741/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                cGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCGTGACCGTGGcc          <  1:470551/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGCAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAAGTGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCGTGACCGTgg            >  2:1567586/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                 gAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTg                                                                                    <  1:2208530/214‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTg                                                                                    >  2:2208530/1‑214 (MQ=255)
                                                                                                                                                                                                                                                                 gAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCata                           >  2:433752/1‑271 (MQ=255)
                                                                                                                                                                                                                                                                 gAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCGTGACCGTgg            >  1:35040/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                   ggCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagc                                                                                                               >  2:1691471/1‑178 (MQ=255)
                                                                                                                                                                                                                                                                   ggCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATaaa                                                                                            <  2:1941737/204‑1 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                  
TATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTC‑AATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGGATTTGAC‑GGCTGACGCTGCGGATCGGCGCGTGACCTTTATG‑TACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGGCAAGTTAATCATCCGCCAGTTGCTGTGTTCCATATGCCCGTGACCGTGGCCTGGCATCA  >  CP042583/473271‑473822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A