Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F210 I1 R1	4928	340.1	5480506	96.9%	5310610	252.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	585,067	3 bp→TGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	585,067	0	A	T	99.5%	861.1 / NA	363	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (1/1); new base T (180/179); total (182/181)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	585,068	0	C	G	99.5%	856.8 / NA	363	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (181/180); minor base T (1/1); total (182/181)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	585,069	0	T	A	99.7%	858.8 / NA	363	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (181/180); total (182/181)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

CATTATTGCTGCTGCTTGCTGGCGAGTTTGTGCGTCGCTTTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGACTAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTGCAAGCCAGGCTTGAC  >  CP042583/584788‑585345

|||

      tgctgctgcTTGCTGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTa                                                                                                                                                                                                                                                                           <  1:2334108/289‑1 (MQ=255)

       gctgctgctTGCTGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTAc                                                                                                                                                                                                                                                                          <  1:309490/289‑1 (MQ=255)

           ctgctTGCTGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCat                                                                                                                                                                                                                                                                      >  2:2070880/1‑289 (MQ=255)

            tgcttgctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGCTGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCata                                                                                                                                                                                                                                                                     <  1:154162/289‑1 (MQ=255)

            tgcttgctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCata                                                                                                                                                                                                                                                                     <  1:2710240/289‑1 (MQ=255)

            tgcttgctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCata                                                                                                                                                                                                                                                                     <  1:2242865/289‑1 (MQ=255)

             gcttgctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCata                                                                                                                                                                                                                                                                     >  1:619192/1‑288 (MQ=255)

             gcttgctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCata                                                                                                                                                                                                                                                                     >  1:234892/1‑288 (MQ=255)

               tggctGCCGAGTTTGTGCGTCCGCGTCACTGACCGCGTTGATAGACGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCa                                                                                                                                                                                                                                                                  <  2:135987/287‑1 (MQ=255)

                 gctGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAAc                                                                                                                                                                                                                                                                <  1:1752002/289‑1 (MQ=255)

                   tGGCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCt                                                                                                                                                                                                                                                              <  1:1776308/289‑1 (MQ=255)

                    ggCGAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTGGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCt                                                                                                                                                                                                                                                              <  2:1791487/288‑1 (MQ=255)

                      cggttttGTGCGTCCGATTCACTACCCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGGGCTAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTgg                                                                                                                                                                                                                                                            <  2:2029461/284‑1 (MQ=255)

                       gAGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGgat                                                                                                                                                                                                                                                          <  1:2499197/289‑1 (MQ=255)

                        aGTTTGTGCGTCCGATTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCCCTGTGAACGCCCGTGCTTACGCATATCCACCTTgatc                                                                                                                                                                                                                                                         >  2:2047974/1‑288 (MQ=255)

                           ttGTGCGTCCGATTCACGGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGgatga                                                                                                                                                                                                                                                        <  1:2047974/287‑1 (MQ=255)

                                cgtccgtttacctaaCCGCGTTGATAGCGGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATCTCGATCGCCACCAGTTTATCGATGCGCTCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATtgt                                                                                                                                                                                                                                                  <  2:1123067/274‑1 (MQ=255)

                                 gtccgattCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATATGCGACCGGCGCGATCTCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGa                                                                                                                                                                                                                                                <  2:1015522/283‑1 (MQ=255)

                                 gtcagattCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGa                                                                                                                                                                                                                                                <  1:2026660/283‑1 (MQ=255)

                                                            cGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCg                                                                                                                                                                                                                                                                                 <  2:1696359/229‑1 (MQ=255)

                                                                         tcatGGAGGCGTACGTGATAGTCGAACGGCGCGATATCGATCGCCCCCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTCCCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGa                                                                                                                                                                                                        <  2:2639008/289‑1 (MQ=255)

                                                                                  cGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGa                                                                                                                                                                                                        >  1:1286870/1‑280 (MQ=255)

                                                                                      cGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGga                                                                                                                                                                                                                                                           <  2:274261/225‑1 (MQ=255)

                                                                                            aGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTTGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTg                                                                                                                                                                                     >  1:91977/1‑289 (MQ=255)

                                                                                              tCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAg                                                                                                                                                                                                                         <  1:252537/251‑1 (MQ=255)

                                                                                              tCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCCGGCAAACAGACCGTgg                                                                                                                                                                                    >  1:884549/1‑288 (MQ=255)

                                                                                              tCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCCCGGTGAAAGACCGTGGTTACGCATATCAACCTGGAAGATATTGTTATCGTTTACCAGATGGCCAACAAGTACCCCAAAGCTGTCGGAGCTTGCAAACAGACCggtga                                                                                                                                                                                   >  2:1267125/1‑285 (MQ=255)

                                                                                                gACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCt                                                                                                                                                                                                                                                              <  1:2285337/212‑1 (MQ=255)

                                                                                                 aCCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGCACGTGGCCaa                                                                                                                                                                                >  2:903678/1‑289 (MQ=255)

                                                                                                        cgATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GAt                                                                                                                                                                        >  1:1598153/1‑289 (MQ=255)

                                                                                                        cgATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAAAAGACCGTGGACAAGAAC‑GAt                                                                                                                                                                        >  1:64989/1‑289 (MQ=255)

                                                                                                                atcgCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCt                                                                                                                                                                                                                                                              >  2:2413672/1‑196 (MQ=255)

                                                                                                                atcgCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCt                                                                                                                                                                                                                                                              <  1:2413672/196‑1 (MQ=255)

                                                                                                                atcgCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAat                                                                                                                                                                >  1:2625617/1‑289 (MQ=255)

                                                                                                                atcgCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAat                                                                                                                                                                >  1:1003932/1‑289 (MQ=255)

                                                                                                                  cgCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAatta                                                                                                                                                              <  1:452221/289‑1 (MQ=255)

                                                                                                                   gCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATCACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGc                                                                                                                                                                                                                    <  2:1964703/235‑1 (MQ=255)

                                                                                                                     caccaGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGa                                                                                                                                                                                                        <  2:535528/245‑1 (MQ=255)

                                                                                                                           tttATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGga                                                                                                                                                                                                                                                           <  2:2562206/188‑1 (MQ=255)

                                                                                                                           tttATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTgg                                                                                                                                                     >  1:367548/1‑289 (MQ=255)

                                                                                                                             tATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGtt                                                                                                                                                   >  2:1407758/1‑289 (MQ=255)

                                                                                                                                                 aGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGCCCGTGGTTTCGCATAACAACCTGGATGATATTTTGATCGTTTACCCGATCGCGAGCCAGTACGCCACGGTTGTCCAGGCTGCCAAACAGACAGTGGCAAAGCAC‑GATAGGCTCAATTTTGTTCCGGTTATGTGAA‑GTTTgccctcgtg                                                                                                                              >  2:1176912/1‑282 (MQ=255)

                                                                                                                                                 aGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGgat                                                                                                                                                                                                                                                          >  2:2297651/1‑167 (MQ=255)

                                                                                                                                                 aGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGa                                                                                                                                                                                                                                                <  2:365474/177‑1 (MQ=255)

                                                                                                                                                 aGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCCAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGa                                                                                                                              >  1:2589423/1‑289 (MQ=255)

                                                                                                                                                  gTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCa                                                                                                                                                                                                                          <  1:526722/198‑1 (MQ=255)

                                                                                                                                                        tAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCC‑GTTTGCGCGCGGAGATTCaa                                                                                                                       >  1:1677937/1‑289 (MQ=255)

                                                                                                                                                        tAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCaa                                                                                                                       >  1:1073431/1‑289 (MQ=255)

                                                                                                                                                             gCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGCTGAAATTGTGATCGTTTACCAGATCGCGAGCAAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGAGGCCAAGAAC‑GATGGGGGAATTATTGTGCTGGTGTTGTGAC‑GGTTTCTCGCGGAAATTAAATTTCa                                                                                                                  >  2:1732472/1‑289 (MQ=255)

                                                                                                                                                             gCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGc                                                                                                                                                        >  1:975380/1‑252 (MQ=255)

                                                                                                                                                             gCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGGGGATATTCAATTTCa                                                                                                                  >  2:2234637/1‑289 (MQ=255)

                                                                                                                                                                aTTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATcg                                                                                                                                                                                                                                 <  2:1903565/177‑1 (MQ=255)

                                                                                                                                                                  tACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTAc                                                                                                                                                                                                                                                                          >  1:1857619/1‑134 (MQ=255)

                                                                                                                                                                         ttACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCt                                                                                                      >  2:1298184/1‑289 (MQ=255)

                                                                                                                                                                                        tGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGt                                                                                        <  2:2212683/288‑1 (MQ=255)

                                                                                                                                                                                          aCCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGt                                                                                                                                                                                      <  2:2483647/194‑1 (MQ=255)

                                                                                                                                                                                          aCCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGAGAAAAAC‑GATGTGAGAATTATTGTGATGGTTTTTTGCA‑GTTTGCGCGCGGAGAGTCCATTTCCGGGCAAATTGTTTTTTTTAGCGGTGTCgg                                                                                     >  2:2463000/1‑289 (MQ=255)

                                                                                                                                                                                          aCCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGc                                                                                                                                                        >  1:1433550/1‑223 (MQ=255)

                                                                                                                                                                                          aCCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCgg                                                                                     >  1:2171006/1‑289 (MQ=255)

                                                                                                                                                                                          aCCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATACTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGACAGCCCGTGGATCCGAAAAACAACCTTGAAGATATAGTGATAGTATACCAGATTGCTAGCCAGTACCACAAAGTGTGAGAGGCTACCACACAGACCGGGGAATCGAACTGAT‑GGATACTTCTTGTGCTCGTTTTGTCCAGGTGTGACCG‑GGATATTAGATTTTACGGTCGAGTTCTTTTTTTcgtcatgttgg                                                                                     >  2:1575123/1‑280 (MQ=255)

                                                                                                                                                                                             gATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGtt                                                                                  <  2:377888/289‑1 (MQ=255)

                                                                                                                                                                                              aTAAATGTTGCTTGTTCGATCTGCTGTGCCACCAGAGTATCAACAAGCTCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTa                                                                                 <  2:633206/289‑1 (MQ=255)

                                                                                                                                                                                               tAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTa                                                                                 <  1:1503048/288‑1 (MQ=255)

                                                                                                                                                                                                   tGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGta                                                                            <  2:2353130/289‑1 (MQ=255)

                                                                                                                                                                                                    gTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGtat                                                                           <  1:804628/289‑1 (MQ=255)

                                                                                                                                                                                                    gTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGtat                                                                           >  1:1197794/1‑289 (MQ=255)

                                                                                                                                                                                                      tGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTg                                                                                         <  1:2225886/273‑1 (MQ=255)

                                                                                                                                                                                                              cGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGAc                                                                  <  1:2472830/288‑1 (MQ=255)

                                                                                                                                                                                                                  ctgctgTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGgag                                                                                                                                                                   <  2:830158/188‑1 (MQ=255)

                                                                                                                                                                                                                  ctgctgTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTACCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATtg                                                             >  2:719574/1‑289 (MQ=255)

                                                                                                                                                                                                                  ctgctgTGCATCCAGAGTATCAACAAGATCCGGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGTTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTAGTATGTTGACCATtg                                                             <  2:480823/289‑1 (MQ=255)

                                                                                                                                                                                                                       gtgCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCACGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGGTCTTTTTTTCGCGTTTTCGGGTTCGGGTATTATGGTGACCaattttcc                                                         >  2:95939/1‑281 (MQ=255)

                                                                                                                                                                                                                        ttcatgcggagTATCAACAAATTCCTGCCCCATCGCCGGGTAATTCATTACCGGAGCACTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCca                                                        <  2:1873065/280‑1 (MQ=255)

                                                                                                                                                                                                                          cATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTgcgcgc                                                                                                                                 >  1:2444637/1‑213 (MQ=255)

                                                                                                                                                                                                                             ccAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGtatt                                                                          <  1:1347011/265‑1 (MQ=255)

                                                                                                                                                                                                                               agagTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAg                                                                                                                                                                                                                         <  2:1478187/122‑1 (MQ=255)

                                                                                                                                                                                                                                    aTCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGta                                                                            <  2:1609873/256‑1 (MQ=255)

                                                                                                                                                                                                                                     tCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTgcg                                                                                                                                    >  1:1846221/1‑199 (MQ=255)

                                                                                                                                                                                                                                     tCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTgcg                                                                                                                                    <  2:1846221/199‑1 (MQ=255)

                                                                                                                                                                                                                                           aGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGa                                                                                                                              <  2:456594/199‑1 (MQ=255)

                                                                                                                                                                                                                                           aGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGta                                                                            <  1:1917016/249‑1 (MQ=255)

                                                                                                                                                                                                                                           aGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTATTTTTTTCGCGTTGTCGGGTTAGGGTATTTTGTTGACCATTGTTCCACAGGGCTGCAAAAAATAAgg                                    >  2:688252/1‑289 (MQ=255)

                                                                                                                                                                                                                                             aTCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAg                                                                                                                                                                                                                         <  1:832205/108‑1 (MQ=255)

                                                                                                                                                                                                                                             aTCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGATGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGtt                                  >  1:2076217/1‑289 (MQ=255)

                                                                                                                                                                                                                                                 tGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTAt                               >  1:1714992/1‑288 (MQ=255)

                                                                                                                                                                                                                                                   cgcCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATgg                                                                                                                                                                      >  1:2373040/1‑152 (MQ=255)

                                                                                                                                                                                                                                                   cgcCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATgg                                                                                                                                                                      <  2:2373040/152‑1 (MQ=255)

                                                                                                                                                                                                                                                   cgcCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTcc                            >  1:1096140/1‑289 (MQ=255)

                                                                                                                                                                                                                                                   cgcCATCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTAAATTTCATGGCAAAGTTCTTTTGTTCGCGTTGTCGGGTTAGGGTATTATGTTTACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTc                             >  1:1330781/1‑288 (MQ=255)

                                                                                                                                                                                                                                                        tCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATgg                                                                                                                                                                      >  2:660113/1‑147 (MQ=255)

                                                                                                                                                                                                                                                        tCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAggg                                                   <  2:432248/261‑1 (MQ=255)

                                                                                                                                                                                                                                                        tCGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAggg                                                   >  1:432248/1‑261 (MQ=255)

                                                                                                                                                                                                                                                         cGCCGGGTAATTCATTACCGGATCTCTCGGTGAAAGACCGTGGTAACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGttt                      <  2:1078637/289‑1 (MQ=255)

                                                                                                                                                                                                                                                               ttacttCATTACCGGATCTCTCGGTTAAATGCCGTGGTTACGCATATCAACCTGGATGTTATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTg                 <  2:884549/284‑1 (MQ=255)

                                                                                                                                                                                                                                                               ttAATTCATTACCGGTGTTCTGGGTGAAAGACCGTGGTTACGCATATAAACCTGGATGGTATTGTGATCGTTTACCGGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTg                 <  2:1543330/287‑1 (MQ=255)

                                                                                                                                                                                                                                                               gtgaTTCCTTACCTGATCTCTCGGAGAAAGTCCGTGGTTACTCATATCAACCTGGATGAGATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGTTTAGTGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTg                 <  2:1096140/285‑1 (MQ=255)

                                                                                                                                                                                                                                                                   ttCATTACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTGCAAGc            <  1:688252/289‑1 (MQ=255)

                                                                                                                                                                                                                                                                        tACCGGATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTGCAAGCCAg         >  1:1563286/1‑287 (MQ=255)

                                                                                                                                                                                                                                                                             gATCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATtg                                                             >  1:1897561/1‑230 (MQ=255)

                                                                                                                                                                                                                                                                              aTCTCTCGGTGAAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGta                                                                            >  1:665774/1‑214 (MQ=255)

|||

CATTATTGCTGCTGCTTGCTGGCGAGTTTGTGCGTCGCTTTCACTGACCGCGTTGATAGCCGCAAAAATCTCATCATGACGGCGTACGTGATAGTCGACCGGCGCGATATCGATCGCCACCAGTTTATCGATGCGATCGGAGGCTAGTGCAGTAAGTGCCATTACCGCTTTACCGCCCATGGAGTGACCGATAAATGTTGCTTTGTCGATCTGCTGTGCATCCAGAGTATCAACAAGATCCTGCGCCATCGCCGGGTAATTCATTACCGGATCTCTCGGACTAAGACCGTGGTTACGCATATCAACCTGGATGATATTGTGATCGTTTACCAGATCGCGAGCCAGTACGCCAAGGTTGTCGAGGCTGCCAAACAGACCGTGGACAAGAAC‑GATGGGAGAATTATTGTGCTGGTTTTGTGCA‑GTTTGCGCGCGGATATTCAATTTCATGGCAAAGTTCTTTTTTTCGCGTTGTCGGGTTAGGGTATTATGTTGACCATTGTGCCACAGGGCTGCAACAAATAAGGTTTATTCCGAGTTTTTCTGCAAGCCAGGCTTGAC  >  CP042583/584788‑585345

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 10 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A