Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,472,290 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,472,2900GC100.0% 817.6 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (197/152);  total (197/152)
*CP0425831,472,2910CG99.4% 813.3 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (195/152);  minor base T (2/0);  total (197/152)
Fisher's exact test for biased strand distribution p-value = 5.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,472,2920TA100.0% 831.9 / NA 349intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (197/152);  total (197/152)

Only 100 of 349 total aligned reads displayed.

AACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGACTCGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGGCTCAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CGCTGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGGCTCATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAAGCTCGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGC  >  CP042583/1472010‑1472571
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
aaCGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGt                                                                                                                                                                                                                                                                                    <  2:696928/289‑1 (MQ=255)
          ccAGTCCTCAAATGCCGCACGATCAATAAACTCATACCGTGGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGa                                                                                                                                                                                                                                                                          <  2:1285476/289‑1 (MQ=255)
                           cACGATCAATAAACTCATCACGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGt                                                                                                                                                                                                                                                                                    <  1:685465/262‑1 (MQ=255)
                                 cAATAAACTCATCACGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGAc                                                                                                                                                                                                                                                   <  1:716896/289‑1 (MQ=255)
                                       aCTCATCACGTAGCGGGGGCGCCCCGCCGTGCTGCTCGGTCAGACGCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAgg                                                                                                                                                                                                                                             <  2:1512416/289‑1 (MQ=255)
                                          catcaCGTAGCGGTGACGCCGTGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAAcg                                                                                                                                                                                                                                                       <  1:158749/276‑1 (MQ=255)
                                          catcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGa                                                                                                                                                                                                                                                    <  1:260647/279‑1 (MQ=255)
                                          catcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTg                                                                                                                                                                                                                                          >  1:2236600/1‑289 (MQ=255)
                                          catcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGGAAATTCCACAACGCGACGGCAGGtga                                                                                                                                                                                                                                          >  2:1815892/1‑287 (MQ=255)
                                            tcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGAt                                                                                                                                                                                                                                        >  2:124000/1‑289 (MQ=255)
                                            tcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGAt                                                                                                                                                                                                                                        >  1:1130459/1‑289 (MQ=255)
                                            tcaCGTAGCGGTGACGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCACAGATTCTGCCGCATCCGTTCTCCATCATGCGTCAACAAAACCTGCTGCTAGCTGCCCAGGGCCTTCTTCAGGGAATCCACGGCAACAAATGGCGACAATGTCTGACCCAGACGCTGGAAATTCCCACACGCGACggacagtggaa                                                                                                                                                                                                                                        >  2:2452997/1‑280 (MQ=255)
                                                  agcggtgacgccgcGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCaa                                                                                                                                                                                                                                  >  2:2319314/9‑289 (MQ=255)
                                                   gcggtgacgccgcGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCCGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCATGTTGATTATCaaa                                                                                                                                                                                                                                 >  1:421676/8‑289 (MQ=255)
                                                       tgacgccgcGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCaaa                                                                                                                                                                                                                                 >  1:1560050/4‑285 (MQ=255)
                                                           gccgcGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAAc                                                                                                                                                                                                                         <  2:1164587/289‑1 (MQ=255)
                                                             cgcgCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGc                                                                                                                                                                                                                       <  2:239165/289‑1 (MQ=255)
                                                               cgcTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTaa                                                                                                                                                                                                                          >  2:1484390/1‑284 (MQ=255)
                                                               cgcTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTaa                                                                                                                                                                                                                          <  1:1484390/284‑1 (MQ=255)
                                                                   gtgcgtctCGGTCGGACTAGGCATGAGGAATGTGCGGGTATAATCGTTGCGCTCTCGCGCCATCAGACAGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCAAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTTCTGATAGCTGTCCAGGGCCTCATGCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATACCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTtga                                                                                                                                                                                                                 <  1:1606363/283‑1 (MQ=255)
                                                                        cctCGGCCGGACGCATCATGCGGAATGTGCGGGTATAATCGCTTCTCTCTCGCGCAATCAGACTTAATAATTCATTCAGTAGCGCGTTATCCTCCTTTTGCTCCGTCATGAAGCCCAATTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑c                                                                                                                                                                                                           <  2:344968/288‑1 (MQ=255)
                                                                              tCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGGAAATTACACAACGCGACGGCAGGTTGCTTAACAAAGCTGAAACGCCCTTgatgatacgagtt                                                                                                                                                                                                      >  2:1109549/1‑282 (MQ=255)
                                                                              tCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCCCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTGGATTATCAAAGCTCTAACCCCCTTGatcat‑ctcgctg                                                                                                                                                                                                     >  2:1695243/1‑283 (MQ=255)
                                                                                   cTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑cc                                                                                                                                                                                                          <  1:2088648/279‑2 (MQ=255)
                                                                                   cTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGAtt                                                                                                                                                                                                  <  1:1815892/287‑1 (MQ=255)
                                                                                   cTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTAc                                                                                                                                                                                                >  1:127828/1‑289 (MQ=255)
                                                                                        cATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGt                                                                                                                                                                                                                                                                                    >  2:2651023/1‑201 (MQ=255)
                                                                                        cATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGt                                                                                                                                                                                                                                                                                    <  1:2651023/201‑1 (MQ=255)
                                                                                        cATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTaa                                                                                                                                                                                                                          <  2:642882/259‑1 (MQ=255)
                                                                                        cATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGATCCGATG‑GATTACaaaaa                                                                                                                                                                                           >  1:11993/1‑287 (MQ=255)
                                                                                                         tataATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAgg                                                                                                                                                                                                                                             >  2:1776821/1‑223 (MQ=255)
                                                                                                         tataATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAgg                                                                                                                                                                                                                                             <  1:1776821/223‑1 (MQ=255)
                                                                                                         tataATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑c                                                                                                                                                                                                           >  1:16973/1‑256 (MQ=255)
                                                                                                         tataATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAatc                                                                                                                                                                          >  2:853716/1‑289 (MQ=255)
                                                                                                           taATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAatca                                                                                                                                                                         >  2:545909/1‑288 (MQ=255)
                                                                                                             aTCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAg                                                                                                                                                                                                                                <  1:860065/232‑1 (MQ=255)
                                                                                                             aTCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAAtcatca                                                                                                                                                                      >  2:215967/1‑289 (MQ=255)
                                                                                                             aTCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAAAAAAACCGGGTTCGTAAtcatca                                                                                                                                                                      >  1:952729/1‑289 (MQ=255)
                                                                                                                  tGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGccc                                                                                                                                                                                                                     >  2:1550693/1‑238 (MQ=255)
                                                                                                                  tGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAg                                                                                                                                                                    >  2:806974/1‑286 (MQ=255)
                                                                                                                  tGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAg                                                                                                                                                                    <  1:806974/286‑1 (MQ=255)
                                                                                                                  tGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAA‑CCGAGTGAGTACAAATAAAACCGGGTTCGGAATCATCAAGaaa                                                                                                                                                                 >  2:2263854/1‑289 (MQ=255)
                                                                                                                        ctgtcgcCAGCAGACTGCAAAATTCCTGCAGTGACGCCTTATCCCCTGTTTGCTCCGTCATGAAGCCCAATCTCTGCCGCCTCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCCTTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCTACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCaaa                                                                                                                                                           <  2:1533467/285‑1 (MQ=255)
                                                                                                                                         aataatTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCg                                                                                                                                          >  1:1894607/1‑289 (MQ=255)
                                                                                                                                         aataatTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTGGATTATCAAAGCTGGAACGCCACTGATGAT‑CCGATTGATTACCAATAAAACCGGGTTGGTAATCAGCAACAAAAACAAACTGCCCGCAATTAAGcc                                                                                                                                          >  2:2307521/1‑288 (MQ=255)
                                                                                                                                           taatTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTc                                                                                                                                        <  1:1109549/289‑1 (MQ=255)
                                                                                                                                                   tcaGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGc                                                                                                                                                                                                                       <  2:1600310/203‑1 (MQ=255)
                                                                                                                                                   tcaGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCca                                                                                                                                 >  1:1081751/1‑288 (MQ=255)
                                                                                                                                                   tcaGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCca                                                                                                                                 >  1:34513/1‑288 (MQ=255)
                                                                                                                                                   tcaGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCca                                                                                                                                 >  1:2442047/1‑288 (MQ=255)
                                                                                                                                                     aGTAGCGCGTTAGCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGAtt                                                                                                                                                                                                  <  2:2558744/221‑1 (MQ=255)
                                                                                                                                                       tAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCcagcagc                                                                                                                            >  1:383345/1‑288 (MQ=255)
                                                                                                                                                        aGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCcagca                                                                                                                              <  1:872434/286‑1 (MQ=255)
                                                                                                                                                            cgTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGc                                                                                                                                                                                                                       <  1:1061839/194‑1 (MQ=255)
                                                                                                                                                            cgTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCcagcagcgacat                                                                                                                       >  1:2139170/1‑283 (MQ=255)
                                                                                                                                                                 tCCTCTTTTTGCTCCGTCCTGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACAtgttgt                                                                                                                  <  2:868199/289‑1 (MQ=255)
                                                                                                                                                                     ctTTTTGCCCCGTCATCAAGCCCAGTTTCGGCCCCATCCGTTCTCAATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGt                                                                                                              <  2:911905/289‑1 (MQ=255)
                                                                                                                                                                      tttttGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTa                                                                                                             >  2:943589/1‑289 (MQ=255)
                                                                                                                                                                           gCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTaa                                                                                                                                                                                                                          >  1:2283331/1‑176 (MQ=255)
                                                                                                                                                                               cGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATtcacaac                                                                                                     >  1:1464347/1‑284 (MQ=255)
                                                                                                                                                                               cGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATtc                                                                                                          <  1:1436208/283‑1 (MQ=255)
                                                                                                                                                                               cGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATtc                                                                                                          >  2:1436208/1‑283 (MQ=255)
                                                                                                                                                                                gTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGt                                                                                                                                                                                                                                                                    >  1:1362087/1‑129 (MQ=255)
                                                                                                                                                                                gTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGt                                                                                                                                                                                                                                                                    <  2:1362087/129‑1 (MQ=255)
                                                                                                                                                                                gTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCAcc                                                                                                    >  2:1134602/1‑288 (MQ=255)
                                                                                                                                                                                gTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGCAATCAAGCGTCAGCCCcag                                                                                                                                >  1:2536208/1‑260 (MQ=255)
                                                                                                                                                                                            cgctctagcccctaccGTTCTCCAGAATGCGTCAACCAAACCTGCTGTTAGCTGGCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCCGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGc                                                                                       <  2:1464347/275‑1 (MQ=255)
                                                                                                                                                                                              tttCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCaaa                                                                                                                                                           >  2:396039/1‑219 (MQ=255)
                                                                                                                                                                                                  tGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAAAGCGACGGCAGGTTGATTATCAAAGCCGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGGAATCAAGCGTCCACCCCAGCAGCGACAAGTTGTCGGTATTACACACCCCATAAACAAAAccagccg                                                                                 >  2:963677/1‑284 (MQ=255)
                                                                                                                                                                                                   gCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTc                                                                                                                                        <  1:927133/233‑1 (MQ=255)
                                                                                                                                                                                                   gCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCCGCAACGACATGTTGTCCGTATTCATCACCCCATTAGCAAAGCCGAcct                                                                                 >  2:732220/1‑287 (MQ=255)
                                                                                                                                                                                                        aTCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAACACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCCGCGACATGTTGTCGGTATTCATCACCCCATGCGCAAAGCCGACCCTCCGcc                                                                           >  2:1019809/1‑289 (MQ=255)
                                                                                                                                                                                                        aTCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCAACACCCCATGAGCAAAGCCGACCGTCTGc                                                                            >  2:1096753/1‑288 (MQ=255)
                                                                                                                                                                                                                       tGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCGGCCCCAGCAGCGACATGTGGTCg                                                                                                                >  2:610387/1‑237 (MQ=255)
                                                                                                                                                                                                                       tGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCg                                                                                                                <  1:610387/237‑1 (MQ=255)
                                                                                                                                                                                                                       tGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGt                                                                                <  1:2397096/269‑1 (MQ=255)
                                                                                                                                                                                                                        gCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTaacga                                                           <  1:641455/289‑4 (MQ=255)
                                                                                                                                                                                                                          gTCAACAAAACCTGCTGATAGCTGTCCCGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCcag                                                                                                                                <  2:432097/218‑1 (MQ=255)
                                                                                                                                                                                                                          gTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTaacgac                                                          >  2:1954808/1‑284 (MQ=255)
                                                                                                                                                                                                                          gTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTaacgac                                                          >  1:2308603/1‑284 (MQ=255)
                                                                                                                                                                                                                            caacaaAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGcc                                                                                                                                                                                                                      >  2:2060198/1‑131 (MQ=255)
                                                                                                                                                                                                                                        ctgATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTTCGaca                                           >  1:1034425/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ctgATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGaca                                           >  2:186354/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  tCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTtgat                                                                                                                                                                                                                >  2:1386548/1‑115 (MQ=255)
                                                                                                                                                                                                                                                  tCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGc                                                                                                                                     >  1:2015583/1‑189 (MQ=255)
                                                                                                                                                                                                                                                  tCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAATGACGCGGTACGTGcactaacaacgccac                                 >  2:1978372/1‑275 (MQ=255)
                                                                                                                                                                                                                                                  tCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTaa                                 >  1:2501340/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  tCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCACCAGCGACTTGTTGTCGGTTCTCATCACCCCATGCGCAAAGCAGACCGCCCTCCATCTGGCCATTAACGACGCGGGACTTGCGAACACCACGCTaa                                 >  2:2407332/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   ccAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTaa                                 >  1:1238541/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          cTCATTCAGGGCCTCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAgaga                         <  1:1533390/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          cTCATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAgaga                         <  1:2351965/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            cATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACg                       >  1:1515574/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cATTCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCCCTAAACCagccacg                       >  2:1050258/1‑284 (MQ=255)
                                                                                                                                                                                                                                                            cATTAAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CTGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGACCGTAATAAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCAATACATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGacaa                                          >  1:1838742/1‑270 (MQ=255)
                                                                                                                                                                                                                                                              ttCAGGGCATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGt                     >  1:297093/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                cAGGGCAGCTAAGGCAACAAATGGCGACAACGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTAt                   <  2:499741/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cATCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGAGACATGTTGTCGGTATTCATAACCCCATGAGCAAAGCCGACCGCCTGCCATTGGGCTATTAACGACGCGGTACGTGCGCCAACATGTCTAAACCcgagcaggcaattgt               >  2:2596319/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                       tCTACGGCAACAAATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGacaa                                          >  1:509412/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                                 caaATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGc  >  1:474753/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 caaATGGCGACAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CCGAGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGCGACATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAACGACGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGc  <  2:297093/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
AACGGGCAAACCAGTCATCAAATGCCGCACGATCAATAAACTCATCACGTAGCGGACTCGCCGCGCTGTGCTGCTCGGTCAGACTCAGCATGCGGAATGTGCGGGTATAATCGCTGCGCTCTCGCGCCATCAGACTGAATAATTCATTCAGTAGCGCGTTATCCTCTTTTTGCTCCGTCATGAAGCCCAGTTTCTGCCGCATCCGTTCTCCATAATGCGTCAACAAAACCTGCTGATAGCTGTCCAGGGCCTCATTCAGGGCATCTACGGCAACAAATGGGCTCAATGTCTGCGCCAGACGCTGTAAATTCCACAACGCGACGGCAGGTTGATTATCAAAGCTGTAACGCCCTTGATGAT‑CGCTGTGATTACAAATAAAACCGGGTTCGTAATCATCAAGAAAACCAAACGGCCCGTAATCAAGCGTCAGCCCCAGCAGGCTCATGTTGTCGGTATTCATCACCCCATGAGCAAAGCCGACCGTCTGCCATTGGGCAATTAAGCTCGCGGTACGTGCGACAACATCGCTAAACCAGAGACGGTATTTGTCCTCATCATCTGC  >  CP042583/1472010‑1472571

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A