Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,478,270 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,478,2700AT99.4% 838.3 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (170/178);  minor base C (1/1);  total (172/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,478,2710CG99.7% 837.8 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (171/178);  total (172/179)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,478,2720TA99.7% 843.5 / NA 351intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (171/179);  minor base G (1/0);  total (172/179)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 351 total aligned reads displayed.

CTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCG  >  CP042583/1477991‑1478550
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
   aaCCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACa                                                                                                                                                                                                                                                                              >  2:1061406/1‑289 (MQ=255)
        cATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAgaga                                                                                                                                                                                                                                                                          >  1:1153527/1‑288 (MQ=255)
               tttACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGGTGCCAGCAGGCCAGTACACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCtt                                                                                                                                                                                                                                                                  >  1:957688/1‑289 (MQ=255)
                  aCCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGgc                                                                                                                                                                                                                                                               <  1:1061406/289‑1 (MQ=255)
                    cGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCAGTGCTGACATTTCAACAGAGATCGGGCTTGgcag                                                                                                                                                                                                                                                             <  1:1621730/289‑1 (MQ=255)
                         aGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACTGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCGGATATTTCAACAGAGCCAGGGCTGGGCAGAAGTa                                                                                                                                                                                                                                                        >  2:2241253/1‑289 (MQ=255)
                         aGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAAc                                                                                                                                                                                                                                                                               <  1:794493/266‑1 (MQ=255)
                         aGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTgg                                                                                                                                                                                                                                                                >  2:215934/1‑281 (MQ=255)
                                  aCGGAGTCAAGATCGCCGTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTGTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCTGGCTTGGCAGCAGTAAGGCTTc                                                                                                                                                                                                                                                 <  1:2111988/287‑1 (MQ=255)
                                      aTTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGc                                                                                                                                                                                                                                            <  1:1919855/288‑1 (MQ=255)
                                                gCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGatc                                                                                                                                                                                                                                 >  1:1413976/1‑289 (MQ=255)
                                                 ccTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCGGTCCACAGAGAAAGACGCATTGCTGACGTTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTGCAAAGCCTGGATGGatca                                                                                                                                                                                                                                >  2:2039569/1‑289 (MQ=255)
                                                 ccTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGatca                                                                                                                                                                                                                                >  1:472438/1‑289 (MQ=255)
                                                        aaTCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATctgctg                                                                                                                                                                                                                         <  1:2496733/289‑1 (MQ=255)
                                                            aTAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGCCCACCGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGGAAGGCTTCAACGCCTGGCTGGATCATCTGCTGCACt                                                                                                                                                                                                                     >  2:1546154/1‑289 (MQ=255)
                                                                  aTCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGa                                                                                                                                                                                                               >  1:1465801/1‑289 (MQ=255)
                                                                    cAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATc                                                                                                                                                                                                             >  1:400742/1‑289 (MQ=255)
                                                                     aaCGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATCTCACCAGAGATAGGGCTTGGCAGCAGTAAGGCTTCaa                                                                                                                                                                                                                                               >  2:1670620/1‑254 (MQ=255)
                                                                       cGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAAc                                                                                                                                                                                                          <  1:223450/289‑1 (MQ=255)
                                                                       cGGTCGCATTTACCCGGTTCATGTGCTCGTCTTACAGGTTACAGCAAATAGCACCGGCAAACATCGGAGCCTGACGACTGGCCAACGGTGGCTGAGTATCTGGTACGAAACGCAGACCGCTTTAGAGAGTGCGCAGACGGTTCTGCGGACGGTTCTGGTTGTACACCACGGTTGACAGCAGGCCAGTCCACAGAGAAAGACGCATTGGTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAAc                                                                                                                                                                                                          <  2:2204442/289‑1 (MQ=255)
                                                                           ctctTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAg                                                                                                                                                                                                      <  1:2007318/289‑1 (MQ=255)
                                                                                  gCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAgg                                                                                                                                                                                               <  1:1747364/289‑1 (MQ=255)
                                                                                       gttccctagCTCTTTGTACCGGTTACCGAAAATCACAACGGCTACCATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGAt                                                                                                                                                                                           <  2:2088904/280‑1 (MQ=255)
                                                                                                 tctTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCCTTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGAt                                                                                                                                                                                           >  2:854044/1‑278 (MQ=255)
                                                                                                   ttCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATc                                                                                                                                                                                                                                                                        >  1:166707/1‑199 (MQ=255)
                                                                                                        aaCGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGgc                                                                                                                                                                                                                                                               <  2:1779715/203‑1 (MQ=255)
                                                                                                             ttACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTc                                                                                                                                                                                                                                                 <  2:1199704/212‑1 (MQ=255)
                                                                                                             ttACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTc                                                                                                                                                                                                                                                 >  1:1199704/1‑212 (MQ=255)
                                                                                                             ttACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCtggatgga                                                                                                                                                                                                                                   >  1:2146650/1‑226 (MQ=255)
                                                                                                               aCCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGc                                                                                                                                                                             >  1:2187488/1‑278 (MQ=255)
                                                                                                               aCCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTg                                                                                                                                                                  >  2:683739/1‑289 (MQ=255)
                                                                                                               aCCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTg                                                                                                                                                                  >  1:337905/1‑289 (MQ=255)
                                                                                                                   cAAATGCCACCGGCTAACATCCGATCATGCCGAATGCCCAACGGTGCCTGATTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGagca                                                                                                                                                              <  2:1091113/289‑1 (MQ=255)
                                                                                                                   cAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGagca                                                                                                                                                              <  2:337905/289‑1 (MQ=255)
                                                                                                                    aaaTCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGagca                                                                                                                                                              <  1:1135075/288‑1 (MQ=255)
                                                                                                                                cTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCAcgc                                                                                                                                                  <  1:681618/288‑1 (MQ=255)
                                                                                                                                cTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTACCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCAcgc                                                                                                                                                  <  2:301530/288‑1 (MQ=255)
                                                                                                                                             cTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgacagg                                                                                                                                    >  1:1492278/1‑282 (MQ=255)
                                                                                                                                              tGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgacaggt                                                                                                                                   <  2:2131275/289‑9 (MQ=255)
                                                                                                                                              tGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgac                                                                                                                                       >  1:749699/1‑281 (MQ=255)
                                                                                                                                              tGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgac                                                                                                                                       <  2:749699/285‑5 (MQ=255)
                                                                                                                                              tGACGAAGGCCCAACGGGGCCTGAGTATCTGGTAAGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGAATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgacaggt                                                                                                                                   <  2:2728757/289‑9 (MQ=255)
                                                                                                                                               gACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCtt                                                                                                                                                                          <  2:2105413/249‑1 (MQ=255)
                                                                                                                                                 cGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCtgg                                                                                                                                                                                                                                        <  2:1138551/185‑1 (MQ=255)
                                                                                                                                                    aTGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCt                                                                                                                              >  1:1836533/1‑288 (MQ=255)
                                                                                                                                                     tGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTc                                                                                                                            <  2:1492278/289‑1 (MQ=255)
                                                                                                                                                         cAACGTTGCCTGAGTATCTGGTACGAACCGCCGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGTTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACgg                                                                                                                        <  2:472438/289‑1 (MQ=255)
                                                                                                                                                          aaCGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTTAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCCCGGt                                                                                                                       >  1:2019094/1‑289 (MQ=255)
                                                                                                                                                          aaCGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGt                                                                                                                       <  1:19647/289‑1 (MQ=255)
                                                                                                                                                             ggTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAg                                                                                                                    <  1:353850/289‑1 (MQ=255)
                                                                                                                                                               tGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGt                                                                                                                   >  1:288189/1‑288 (MQ=255)
                                                                                                                                                                 ccTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTg                                                                                                                                                                                             <  2:1977627/212‑1 (MQ=255)
                                                                                                                                                                        aTCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATc                                                                                                         <  2:2264256/289‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCggg                                                                                                                                                                                                                                                                     <  2:225362/132‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGcc                                                                                                                                                                                                                                           <  1:576451/158‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTg                                                                                                                                                                                             <  1:1346862/204‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTg                                                                                                                                                                                             >  2:1346862/1‑204 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACt                                                                                                                                                                                       <  2:1878865/210‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAgcgacaggt                                                                                                                                   >  1:1102691/1‑254 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCa                                                                                                        <  1:1591707/289‑1 (MQ=255)
                                                                                                                                                                         tCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCa                                                                                                        >  2:2474287/1‑289 (MQ=255)
                                                                                                                                                                           cgttACGAAACGCAGACCGCTTTCGAAAAGGCGCACACGGTTGTGCTGACGGTTCTGGTGGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACAGTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGGGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                      <  2:1241652/286‑1 (MQ=255)
                                                                                                                                                                            ggTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTTGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTAACCATAATCAg                                                                                                       >  1:1253542/1‑287 (MQ=255)
                                                                                                                                                                             gcaCGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGCGAAAGACGCATTGTTGAACTTTCAACAGAGATCGGGCCTGGCAGCAGTAAGGCTTCAACGCATGGCTGGATCATCTGCTGCACTTTCGGACCAACGCACCCGTAGGAGATCCCTTCCCGATCGCCTCTGACGTTGAGAAGCGTTTTCACCCGCTTGACGCAACGGCCCGCTTCCTGGTGACTACCACAAATCGGGCt                                                                                                    >  2:1122553/3‑289 (MQ=255)
                                                                                                                                                                                cGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGc                                                                                                 <  1:2036989/289‑1 (MQ=255)
                                                                                                                                                                                 gAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTAccc                                                                                                               <  1:440105/274‑1 (MQ=255)
                                                                                                                                                                                               tttCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGCCAGGTCAGCTTCACGGTGAGTTCCCAGCATCAGGCTTGCGTGTAACgtccccg                                                                                   >  2:1604206/1‑282 (MQ=255)
                                                                                                                                                                                                                        ctgACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGc                                                                                                                                                                                                                                            <  2:1467366/110‑1 (MQ=255)
                                                                                                                                                                                                                           aCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGgc                                                                                                                                                                                                                                                               >  2:601836/1‑88 (MQ=255)
                                                                                                                                                                                                                           aCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGgc                                                                                                                                                                                                                                                               <  1:601836/88‑1 (MQ=255)
                                                                                                                                                                                                                           aCGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                      <  1:2417148/241‑1 (MQ=255)
                                                                                                                                                                                                                             ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCAcgc                                                                                                                                                  >  1:2560796/1‑195 (MQ=255)
                                                                                                                                                                                                                             ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgcgc                                                    >  2:916226/1‑289 (MQ=255)
                                                                                                                                                                                                                             ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgcgc                                                    >  2:1664111/1‑289 (MQ=255)
                                                                                                                                                                                                                             ggTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCAAGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACGGGCTCATCCGGGATGTTGCTGTATCGGTAAACAcgccg                                                    >  2:446049/1‑287 (MQ=255)
                                                                                                                                                                                                                              gTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCTACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACAcgcgc                                                    >  1:515857/1‑288 (MQ=255)
                                                                                                                                                                                                                                         acacCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGAt                                                                                                                                                                                <  1:2256937/153‑1 (MQ=255)
                                                                                                                                                                                                                                          caccacGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc                                       <  1:835277/289‑1 (MQ=255)
                                                                                                                                                                                                                                          aaccacGGTTGCCCGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGATTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc                                       <  1:2319794/288‑1 (MQ=255)
                                                                                                                                                                                                                                             cacGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAgg                                                                                                      >  1:1284568/1‑223 (MQ=255)
                                                                                                                                                                                                                                              acGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGCTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGa                                    >  2:2411129/1‑288 (MQ=255)
                                                                                                                                                                                                                                               cGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACg                                                                                                                         >  2:526613/1‑202 (MQ=255)
                                                                                                                                                                                                                                               cGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGa                                    >  1:224604/1‑287 (MQ=255)
                                                                                                                                                                                                                                                ggTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACg                                                                                                                                                                                                         <  2:783453/121‑1 (MQ=255)
                                                                                                                                                                                                                                                    gCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGTTCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAAcc                                       <  2:1719548/279‑1 (MQ=255)
                                                                                                                                                                                                                                                      cagcagGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCa                           <  1:2610388/289‑1 (MQ=255)
                                                                                                                                                                                                                                                       agcagGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCaa                          >  2:2334669/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         cagGCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCaa                          >  1:2104994/1‑287 (MQ=255)
                                                                                                                                                                                                                                                            gCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCCCGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTcc                     >  2:2700089/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            gCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                    <  2:403637/242‑1 (MQ=255)
                                                                                                                                                                                                                                                            gCCAGTCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTcc                     >  1:266492/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 tCCACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGa                                                                                                                                                                                 <  2:2608411/128‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ccACAGAGAAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCatat                 <  2:1934230/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gaAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTCCAATCTCCATATCGAAACGc         <  1:2719245/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gaAAGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCAGCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGc         <  1:2064084/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGTATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCATAGCTTCTTCAATCTCCATACCGAAACGCCa       >  2:951772/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           aaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGAtgttgttgt                                                                    <  2:2020684/227‑1 (MQ=255)
                                                                                                                                                                                                                                                                           aaGACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCa                                          >  2:1272638/1‑253 (MQ=255)
                                                                                                                                                                                                                                                                             gACGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATGCGGGATGTAGATGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCAACTCGAAACGCCAGc     >  1:1768261/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                               cGCATTGCTGACATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGCGACAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCt    <  2:1619864/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
CTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGTTACCGCAAATCACACCGGCTAACATCAGATCCTGACGAATGCCCAACGGTGCCTGAGTATCTGGTACGAAACGCAGACCGCTTTCGAAAATGCGCACACGGTTCTGCTGACGGTTCTGGTTGTACACCACGGTTGCCAGCAGGCCAGTCCACAGAGAAAGACGCATTGCACTCATTTCAACAGAGATCGGGCTTGGCAGCAGTAAGGCTTCAACGCCTGGATGGATCATCTGCTGCACTTTCGGATCAACGAAGCTGTAGGTGATCACTTCCTGATAGCCTTTGTCGTTGAGCAGCGTTTTCACGCGCTTGAGGCTCAGGTCAGCTTCACGGTGAGTACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTCTTCAACCAGATCTTCTTCAATCTCCATATCGAAACGCCAGCTCG  >  CP042583/1477991‑1478550

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A