Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,495,821 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,495,8210AT99.3% 644.8 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (136/137);  total (139/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,495,8220GC99.3% 646.2 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (137/137);  minor base A (1/1);  total (139/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,495,8230CG99.6% 652.0 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (138/137);  total (139/138)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 277 total aligned reads displayed.

TCTGGCGGCGCGGGTTCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGAGCCAACATAACGAAAAGAACCCACATCAGCACCAGAGTCCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACAGTCTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACAGTCTGCGT  >  CP042583/1495541‑1496105
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                          
    gcggcgCGGGTTCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACg                                                                                                                                                                                                                                                                                  >  2:1282869/1‑289 (MQ=255)
        cgcgGGTTCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGaaaa                                                                                                                                                                                                                                                                              >  1:2025551/1‑289 (MQ=255)
          cgGGTTCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAAGGCATATTAAAAATCAGAAAAACTGTGGTTTAGCCGCTTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTTTAGTTAGAGTG‑TTTTTTGACCAAAACAGCGGACCTTTCAGTAATAAATTAAGGAGTCGCATTCACTTTCGCAACATAAGCAAAAGa                                                                                                                                                                                                                                                                            >  2:1811381/1‑289 (MQ=255)
              ttCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAAcc                                                                                                                                                                                                                                                                         <  1:2357294/288‑1 (MQ=255)
              ttCAGTGCTTGGGACATGGCTAATATGCAGGCGGTTTGGATGGCGGATAGGTATCTTCCTTACTGGCTGAACTAATCGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACTTCCCGCTTTGCGTGTAAGTCATAACACCGTTTCCAGAATAGGCGCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTGTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAAcc                                                                                                                                                                                                                                                                         <  2:2592472/288‑1 (MQ=255)
                  gtgcgtgGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAt                                                                                                                                                                                                                                                                    <  1:2364770/289‑1 (MQ=255)
                                    ataatCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAAccc                                                                                                                                                                                                                                                                        <  1:978629/267‑1 (MQ=255)
                                    ataatCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCcac                                                                                                                                                                                                                                                                      >  2:894729/1‑269 (MQ=255)
                                    ataatCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCcac                                                                                                                                                                                                                                                                      <  1:894729/269‑1 (MQ=255)
                                    ataatCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCagtcaccact                                                                                                                                                                                                                                                   >  1:2614584/1‑280 (MQ=255)
                                           ggCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGACTAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTATATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTACAATGGCGAAACATAACGAAACGAACCCACACAAGCACCAGTCACCACTACACGaa                                                                                                                                                                                                                                            >  1:2598880/1‑287 (MQ=255)
                                                  ttGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCa                                                                                                                                                                                                                                                               >  1:1875156/1‑262 (MQ=255)
                                                       gtcGGAGCTGTTCCTTAATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCagcgaagcga                                                                                                                                                                                                                               <  2:1417081/287‑1 (MQ=255)
                                                          ggAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAAc                                                                                                                                                                                                                            <  1:770661/289‑1 (MQ=255)
                                                          gcaGCGTTGTCTTCATTCCTGGCTTCACTAAACGCATATTAAAAATCCGTATTACTGTAGTTTAGCCGCTTGAGCCCGTGTACGTCCCGCTTTGAGTGTATTCCATAACACCGTTTCCAAAATAGTCTCCGAAGCGGGATCTGGC‑TGGCGGTCTATAGTTAGAGCG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGTAGACGAGTTCAATGTCGCAACAGAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAAc                                                                                                                                                                                                                            <  2:2718517/287‑1 (MQ=255)
                                                                         ttacgtgCTTCACTAAACGCATAATAAAAATCAGAAAAGCTGTAGTTTAGCCGATGTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGActcac                                                                                                                                                                                                             <  2:2328511/283‑5 (MQ=255)
                                                                          tACTTGCTTCACTAAACGCATATTAAAAATCAGTAAAACTGTAGTTTAGCCGAGTTAGCCCCTGTACGTCCCGGTTTGCGTGTCTTTCATAACACCGGTTCCAGAAGCGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCTACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGActcact                                                                                                                                                                                                            <  2:1354371/289‑6 (MQ=255)
                                                                               gCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCACTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACAACTACACGATTCCAGCGAAGCGAAACCGGGGATGGActcactggac                                                                                                                                                                                                        >  1:74590/1‑279 (MQ=255)
                                                                                   cACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGa                                                                                                                                                                                                   >  1:1590598/1‑289 (MQ=255)
                                                                                              tatTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCagt                                                                                                                                                                                                                                                          <  2:545449/223‑2 (MQ=255)
                                                                                               atTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAAc                                                                                                                                                                                                                            >  1:1709741/1‑252 (MQ=255)
                                                                                                            aaaaCTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCTTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGc                                                                                                                                                                           <  2:1384781/288‑1 (MQ=255)
                                                                                                            aaaaCTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGc                                                                                                                                                                           <  1:1282869/288‑1 (MQ=255)
                                                                                                                cTGTAGTTTAGCCGTTTTAGCCCCTATACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAAc                                                                                                                                                                      <  1:2152810/289‑1 (MQ=255)
                                                                                                                cTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAAc                                                                                                                                                                      <  2:2614584/289‑1 (MQ=255)
                                                                                                                    aGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCaa                                                                                                                                                                   <  1:323047/288‑1 (MQ=255)
                                                                                                                           ccGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAt                                                                                                                                                                                                                                                                    <  1:2056163/184‑1 (MQ=255)
                                                                                                                            cGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAg                                                                                                                                                          <  1:937572/289‑1 (MQ=255)
                                                                                                                             gATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGc                                                                                                                                                                                            >  2:645448/1‑254 (MQ=255)
                                                                                                                               tttAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTACAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTg                                                                                                                                                       <  2:2124530/289‑1 (MQ=255)
                                                                                                                                 tAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGca                                                                                                                                                     <  1:1188193/289‑1 (MQ=255)
                                                                                                                                 tAGCCCCCGTACGTCCCCGTTTGGGGGTATTTCCTAAAACCGTTTCCAGGATAGTTCCCCAAGCGGGGTCTGGCGTGGT‑GTCTATTGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGca                                                                                                                                                     <  2:44860/289‑1 (MQ=255)
                                                                                                                                     cccTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGcaca                                                                                                                                                   <  1:2432225/287‑1 (MQ=255)
                                                                                                                                       ttGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCAt                                                                                                                                                                                      <  1:2227927/249‑1 (MQ=255)
                                                                                                                                        tggaCGTCCCTCGTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCGGGC‑TGGTGGTCTATAGTTAGAGAG‑GTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                              <  2:1025409/286‑1 (MQ=255)
                                                                                                                                        tGTACGTCCCGGTTTGCGTGTATTTCATAAACCCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                              <  2:743009/289‑1 (MQ=255)
                                                                                                                                        tGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                              <  1:1540535/289‑1 (MQ=255)
                                                                                                                                         gTACTTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGCC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGca                                                                                                                                                     <  1:2543852/281‑1 (MQ=255)
                                                                                                                                              tCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCGGAACCAAAACCGCCAGGTGCACAACCTACCGcc                                                                                                                                         >  1:595966/1‑288 (MQ=255)
                                                                                                                                                 cGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCCCCCCAg                                                                                                                                     >  1:1436934/1‑289 (MQ=255)
                                                                                                                                                  gCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGAACTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCCGCGGCTGAACCAACACCCCCCGGCGCCCAACCTACCCCCCCAgg                                                                                                                                    >  2:797450/1‑289 (MQ=255)
                                                                                                                                                   cTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAggg                                                                                                                                   >  1:851202/1‑289 (MQ=255)
                                                                                                                                                   cTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTCCACAACCTACCGCCCCAggg                                                                                                                                   >  1:2177798/1‑289 (MQ=255)
                                                                                                                                                   cTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCAAGCGAAGCGAAACCGGGGATGGACCCACTGGCACCTGAGGACGGCCCTCATCGTCCAGCGGCTGCACCAACACCGCCAGGGGCACAACCCACCg                                                                                                                                           >  2:2543852/1‑281 (MQ=255)
                                                                                                                                                        cGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAg                                                                                                                                 >  1:1269331/1‑286 (MQ=255)
                                                                                                                                                           gtATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                           <  1:624072/289‑1 (MQ=255)
                                                                                                                                                           gtATTTCATAAAACCGTTTCCAGAAAGGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                           <  2:1870150/289‑1 (MQ=255)
                                                                                                                                                                      cacCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTa                                                                                                                                                                                                                                                  <  2:1439261/159‑1 (MQ=255)
                                                                                                                                                                         cGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATACCGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCTTCCAGCGGCTGAACCAAAACAGCCACGTGCACAACCTACCGCCCCAGGGACCCAGACAGccccgaaaccg                                                                                                              >  2:5942/1‑281 (MQ=255)
                                                                                                                                                                         cGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATAcgc                                                                                                             >  1:1353403/1‑289 (MQ=255)
                                                                                                                                                                         cGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATAcgc                                                                                                             >  1:1439293/1‑289 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCGGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCGGaa                                                                                                                           >  2:925480/1‑273 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAAcc                                                                                                                                                                                                                                                                         >  2:872045/1‑131 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCagcgaagcga                                                                                                                                                                                                                               <  2:169962/173‑1 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGActcactgg                                                                                                                                                                                                          >  2:849031/1‑187 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGActcact                                                                                                                                                                                                            >  2:2669154/1‑187 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                           <  2:421405/273‑1 (MQ=255)
                                                                                                                                                                           tttCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                           >  1:421405/1‑273 (MQ=255)
                                                                                                                                                                                   aTAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGcc                                                                                                                                                            <  2:1516853/232‑1 (MQ=255)
                                                                                                                                                                                     aGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGaaaa                                                                                                   >  1:350506/1‑287 (MQ=255)
                                                                                                                                                                                       tctcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAgg                                                                                                                                                                                                 <  1:2713904/191‑1 (MQ=255)
                                                                                                                                                                                       tctcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCa                                                                                                                                      >  1:1978547/1‑250 (MQ=255)
                                                                                                                                                                                       tctcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCa                                                                                                                                      <  2:1978547/250‑1 (MQ=255)
                                                                                                                                                                                       tctcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACtt                                                                                               >  1:660831/1‑289 (MQ=255)
                                                                                                                                                                                         tgtgaaaggggATCTGGC‑TATTGGGCTATAGTTAGAAAG‑TTTTTTGCCCAAAACAGCGGCCCTTTCAGTAAGAAATTAAGGAGACGAGTTCAATGTCGCAACATCACGAAACGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTaa                                                                                             <  2:2598880/281‑1 (MQ=255)
                                                                                                                                                                                         tcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGc                                                                                                                        <  2:1771218/262‑1 (MQ=255)
                                                                                                                                                                                         tcCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTaa                                                                                             <  2:1269331/289‑1 (MQ=255)
                                                                                                                                                                                             aaGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGcc                                                                                                                                                            <  2:2217411/222‑1 (MQ=255)
                                                                                                                                                                                                  ggttctgtc‑tgGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAACCAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTgg                                                                                     <  2:132874/285‑1 (MQ=255)
                                                                                                                                                                                                       ttgc‑tggTTGTCTATAGTTAGAGAG‑TTTTTTAACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACg                                                                               <  2:493599/287‑1 (MQ=255)
                                                                                                                                                                                                        ggc‑tggTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGcaca                                                                                                                                                   <  2:2039008/220‑1 (MQ=255)
                                                                                                                                                                                                         gc‑tggTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACACCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGGCgga                                                                             >  1:1602710/1‑287 (MQ=255)
                                                                                                                                                                                                              gtggtCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCa                                                                         >  2:2265533/1‑289 (MQ=255)
                                                                                                                                                                                                                 gtCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAg                                                                      >  1:552529/1‑289 (MQ=255)
                                                                                                                                                                                                                        tataaagag‑GTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAAGGTCGCAAAATAACGAAAAGAACCCACAGCGGCACCAGTCCCCACTAAACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTAGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGa                                                               <  2:1602710/284‑1 (MQ=255)
                                                                                                                                                                                                                           agagagtTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAAACTAATTCCCTGGAAGACGTACGCAAAGGCAGTGaaa                                                             >  2:1640791/1‑289 (MQ=255)
                                                                                                                                                                                                                           agagag‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTg                                                                                                                                                       >  1:1071313/1‑198 (MQ=255)
                                                                                                                                                                                                                           agagag‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCGCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTCAATTCTCTGGAAGAAGTACGCAAAGGCatacaaaa                                                            >  2:1741318/1‑282 (MQ=255)
                                                                                                                                                                                                                           agagag‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCCCTCATCGTCCAGCGGCTGACCCAACACCCCCAGGTGCACAACCTCCCGCCCAAGGGAGCCTGAAAGCCCCTGACACGCGTAACGAAAAACTTAATTCCCTGGAAGACGTACGCAAAGGCAGGAaaaa                                                            >  2:669021/1‑289 (MQ=255)
                                                                                                                                                                                                                             agag‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGcc                                                                                                                                                            >  1:503185/1‑191 (MQ=255)
                                                                                                                                                                                                                                  ttttttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGAGAAACCGGGGATGGACTCACTGGCACCTGAGGa                                                                                                                                                                                                <  2:2303644/151‑1 (MQ=255)
                                                                                                                                                                                                                                  ttttttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGAGAAACCGGGGATGGACTCACTGGCACCTGAGGa                                                                                                                                                                                                >  1:2303644/1‑151 (MQ=255)
                                                                                                                                                                                                                                     tttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCt                                                   <  1:2471926/289‑1 (MQ=255)
                                                                                                                                                                                                                                       tGACCAAAACAGCGGCCACTACAATAAAAAATTAAGGAGACGCGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTAACCGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGa                                                 <  2:2528275/289‑1 (MQ=255)
                                                                                                                                                                                                                                         caaataaCCGCGGACCTTGCAATAAAGAATTAAGGAGACGAGTTCCAGCTCCAAAAATAACGACAAGAACCCACGTCAGCACCAGTCCCCCCTACACGATTCCAGCTAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACCCCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGAcc                                               <  2:1542222/284‑1 (MQ=255)
                                                                                                                                                                                                                                         aCCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGAcc                                               <  2:1931058/289‑1 (MQ=255)
                                                                                                                                                                                                                                          ccAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGAcc                                               <  1:1381229/288‑1 (MQ=255)
                                                                                                                                                                                                                                          ccAAAACAGCGGCCCGTTCAGTAAGAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCGCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGAcc                                               <  2:1892368/288‑1 (MQ=255)
                                                                                                                                                                                                                                           cAACACAGCGGCCCTTTCAGTAATAATTTAATGTGACGAGGTCAATGTAGCAACATAACGAAACGAACCCACATCAGCACCAGTCACCACTGCACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAAGAAACACCGCCAGGTGCACAACCTACCGGCCCTGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCAc                                             <  2:1132286/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   cGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCATGGGGCCTGAAAGCCCCTGATACGCGCAACGAAAAACTTAATTCTCTGGAAGACGGACGCAAAGCAAGTGAAAATTATGCGCTGACCCCTaaaccgg                                     >  2:2459014/1‑284 (MQ=255)
                                                                                                                                                                                                                                                   cGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAgg                                     >  2:938304/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  taaATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGAACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCcg                      <  2:332208/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aaaTTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCcga                     <  1:1486424/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATc                <  1:1633505/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAAc                                                                                                                                                                      <  1:1020247/133‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAgg                                                                                                                                    <  1:1773567/167‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                           >  1:77815/1‑176 (MQ=255)
                                                                                                                                                                                                                                                                              aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAAc           >  1:1837673/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAAACTACCGCCCCAGGGAGCCTGAAAGCCCCAGATACGCGTAACGAAACACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATACGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAAct          >  1:113707/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                   ttCAATGTCGCAACATAACGAAAAGAACCCACATCAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAAct          >  2:1245923/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                          
TCTGGCGGCGCGGGTTCCGTGCGTGGGACATAGCTAATAATCTGGCGGTTTTGCTGGCGGAGCGGTTTCTTCATTACTGGCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGC‑TGGTGGTCTATAGTTAGAGAG‑TTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGAGCCAACATAACGAAAAGAACCCACATCAGCACCAGAGTCCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACAGTCTGGCACCTGAGGACGGCTCTCATCGTCCAGCGGCTGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACAGTCTGCGT  >  CP042583/1495541‑1496105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A