Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,498,400 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,498,4000AT99.4% 847.6 / NA 355intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (181/171);  minor base G (1/1);  total (183/172)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,498,4010CG99.4% 835.7 / NA 355intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  major base G (179/172);  minor base A (2/0);  total (183/172)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,498,4020TA100.0% 848.5 / NA 355intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (183/172);  total (183/172)

Only 100 of 355 total aligned reads displayed.

GCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAAGCTCGCACTTGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGGCTACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGGCTCTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTG  >  CP042583/1498123‑1498670
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                            
  gcTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAAcaca                                                                                                                                                                                                                                                                    <  1:2565417/288‑1 (MQ=255)
    tttGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGCGCGATAGCACCTTTCAACGACGCTGATGTCAAAACATcc                                                                                                                                                                                                                                                                 >  1:1954889/1‑289 (MQ=255)
      gatgtttGCCAGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATACa                                                                                                                                                                                                                                                                >  1:1612307/7‑288 (MQ=38)
       gTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGc                                                                                                                                                                                                                                                              <  2:1893673/289‑1 (MQ=255)
                ggATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTCACCGATAGCACCTTTAAACGACCCGTATGTCAACACAACCAGCCCCGTTaa                                                                                                                                                                                                                                                      >  2:2099295/1‑288 (MQ=38)
                  aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGc                                                                                                                                                                                                                                                    >  2:630615/1‑288 (MQ=255)
                  aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCg                                                                                                                                                                                                                                                   >  1:1456830/1‑289 (MQ=255)
                  aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACCCCGATGTCACCACAACCAGCTCCGTTAAGCg                                                                                                                                                                                                                                                   >  2:48511/1‑289 (MQ=255)
                    gcggcgTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTg                                                                                                                                                                                                                                                 <  1:378547/289‑1 (MQ=255)
                       gcgTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTggg                                                                                                                                                                                                                                               <  2:1781152/288‑1 (MQ=255)
                       gcgTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGa                                                                                                                                                                                                                                              >  1:47079/1‑289 (MQ=255)
                         gTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGaa                                                                                                                                                                                                                                             <  1:38598/288‑1 (MQ=255)
                          tGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAAc                                                                                                                                                                                                                                           >  1:2500921/1‑289 (MQ=255)
                                ccTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAg                                                                                                                                                                                                                                     <  2:1965673/289‑1 (MQ=255)
                                ccTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAg                                                                                                                                                                                                                                     <  1:2545035/289‑1 (MQ=255)
                                         gCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGAc                                                                                                                                                                                                                            >  1:2135757/1‑289 (MQ=255)
                                          acTAAAAAACTATGCAAATGCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTGTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACg                                                                                                                                                                                                                           <  2:1542054/288‑1 (MQ=255)
                                             aCAAAACTGTGCAAATTCAATATATGGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGGCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGAt                                                                                                                                                                                                                        <  2:2486528/289‑1 (MQ=255)
                                                   cTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACg                                                                                                                                                                                                                           <  1:2383694/280‑1 (MQ=255)
                                                   cTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGtatt                                                                                                                                                                                                                  >  1:655227/1‑289 (MQ=255)
                                                    tgtgCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTg                                                                                                                                                                                                                              >  1:1683897/1‑276 (MQ=255)
                                                    tgtgCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGtatta                                                                                                                                                                                                                 >  2:174955/1‑289 (MQ=255)
                                                      tgCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAg                                                                                                                                                                                                                                     <  1:1080886/267‑1 (MQ=255)
                                                                atatatTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGcc                                                                                                                                                                                                     >  1:1573954/1‑289 (MQ=255)
                                                                      tGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGa                                                                                                                                                                                                                         >  1:1787599/1‑263 (MQ=255)
                                                                         aGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGacac                                                                                                                                                                                            >  2:346880/1‑289 (MQ=255)
                                                                           gAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGCTAGTATTATCGATAAACGCCGGATGAcaca                                                                                                                                                                                           >  2:2221915/1‑288 (MQ=255)
                                                                               cacGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAACCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCActct                                                                                                                                                                                                                               >  2:2694334/1‑248 (MQ=255)
                                                                                acGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCAcc                                                                                                                                                                                      >  1:2107989/1‑288 (MQ=255)
                                                                                          gATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAg                                                                                                                                                                                                                                                               >  1:1224352/1‑205 (MQ=255)
                                                                                          gATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGa                                                                                                                                                                                                                         <  1:2618188/243‑1 (MQ=255)
                                                                                          gATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAgcgaacg                                                                                                                                                                           >  1:897367/1‑283 (MQ=255)
                                                                                          gATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAgcgaacg                                                                                                                                                                           <  2:591103/289‑7 (MQ=255)
                                                                                                cgaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCAc                                                                                                                                                                      >  2:2582781/1‑288 (MQ=255)
                                                                                                cgaagcgCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCAc                                                                                                                                                                      >  1:1651347/1‑288 (MQ=255)
                                                                                                     cgcATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGAt                                                                                                                                                                >  1:2738082/1‑289 (MQ=255)
                                                                                                        aTCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGc                                                                                                                                                             <  1:1281428/289‑1 (MQ=255)
                                                                                                           aGGCTGTGTTGCGTTTGTCAGCAGGCTCAAGAGACGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGCTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCTACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCGCCAGCGAACGATCACCCCGATGGCCt                                                                                                                                                           <  2:2181638/288‑1 (MQ=255)
                                                                                                                  tttGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCAt                                                                                                                                                    >  1:1194492/1‑288 (MQ=255)
                                                                                                                           gTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATCAACGCCGGAGGACACATCACCTCCAGCCAACGATCCCCCCGATGGCCCGCGTCATCCAGCACtt                                                                                                                                           >  2:2519591/1‑288 (MQ=255)
                                                                                                                           gTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACtt                                                                                                                                           >  2:38457/1‑288 (MQ=255)
                                                                                                                             cagcagGCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCa                                                                                                                                        <  1:1072255/289‑1 (MQ=255)
                                                                                                                                   tctcAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCGGACGGCCTGCGTCAGCCAGCACTGCCATGAACa                                                                                                                                  >  2:1466080/1‑289 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGa                                                                                                                                                                                                                         <  1:78225/192‑1 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGa                                                                                                                                                                                                                         >  2:78225/1‑192 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCg                                                                                                                                                                                                    <  2:1855434/213‑1 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCg                                                                                                                                                                                                    >  1:1855434/1‑213 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGa                                                                                                                                                                                                  <  1:2045435/215‑1 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGacac                                                                                                                                                                                            <  2:1025612/221‑1 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAgcgactc                                                                                                                           >  1:542900/1‑280 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAgcgactc                                                                                                                           >  1:1550815/1‑280 (MQ=255)
                                                                                                                                             cgcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAgcgaccc                                                                                                                           >  1:504651/1‑280 (MQ=255)
                                                                                                                                                  ttACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTGCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACACTGAAGTCAACACATCCAGCTCCGCTAAGCGTGGCAAACAGTAAGCACTCTGACGGATTGTATTATCGATAAACGCCGGCTGCAACATCACCTCCAGCGAACGACCACCCCGCAGGCCTGCCGCATCCAGCACTTTCAAGACCAgcgacgccctgatc                                                                                                                    >  2:2404906/1‑275 (MQ=255)
                                                                                                                                                   tACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGAtct                                                                                                                   <  1:229274/288‑1 (MQ=255)
                                                                                                                                                     cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                <  1:1137632/289‑1 (MQ=255)
                                                                                                                                                     agcccccTTGGTAGGAATTAATCGCCGGATACAAGGTTCGCGCCGCATCTGTCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                <  2:508804/288‑1 (MQ=255)
                                                                                                                                                       ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                              <  2:2290534/289‑1 (MQ=255)
                                                                                                                                                       ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                              <  1:189097/289‑1 (MQ=255)
                                                                                                                                                            tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCa                                                                                                                                              <  1:1823895/252‑1 (MQ=255)
                                                                                                                                                            tttGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCa                                                                                                                                              >  2:1823895/1‑252 (MQ=255)
                                                                                                                                                              tGTAGGAATTAATCGCCGGATGCAAAGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGa                                                                                                                                                                                               <  2:2629257/201‑1 (MQ=255)
                                                                                                                                                                     aTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGc                                                                                                   >  2:1103847/1‑286 (MQ=255)
                                                                                                                                                                     aTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAc                                                                                                 <  1:21657/288‑1 (MQ=255)
                                                                                                                                                                         accgcgcgATGCCAGGTTCACGCCGCATCTGGCCAACACCCTCACTTACACACCCCGATCACTCCCCAACCGATAACCACGCTGAGCGAGAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  2:1600709/282‑1 (MQ=255)
                                                                                                                                                                         aTCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGCTAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  1:224258/289‑1 (MQ=255)
                                                                                                                                                                         aTCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  1:346880/289‑1 (MQ=255)
                                                                                                                                                                         aTCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  1:2425326/289‑1 (MQ=255)
                                                                                                                                                                         aTCGCCGCATGCAAGGTTCACGCCGCATCTGTCAACCATCCTCACTTACACATCCCGATAACTCCCCAACCGCTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  2:1651347/289‑1 (MQ=255)
                                                                                                                                                                           cGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGaa                                                                                          <  1:1325913/289‑1 (MQ=255)
                                                                                                                                                                              cGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGaa                                                                                          <  2:2000159/286‑1 (MQ=255)
                                                                                                                                                                                      aGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCa                                                                                                  >  1:1162440/1‑270 (MQ=255)
                                                                                                                                                                                           cACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCa                                                                                                                                                                       <  1:673514/196‑1 (MQ=255)
                                                                                                                                                                                           cACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCa                                                                                                                                                     <  2:888169/214‑1 (MQ=255)
                                                                                                                                                                                            aCGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                <  2:1311274/250‑1 (MQ=255)
                                                                                                                                                                                            aCGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGACTGCACTGCTGAATCCCTGGGAAggtcccc                                                                         >  2:122881/1‑283 (MQ=255)
                                                                                                                                                                                                   aTCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAgcg                                                                                                                                                                               <  1:1735184/180‑3 (MQ=255)
                                                                                                                                                                                                   aTCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                            <  2:1140232/263‑1 (MQ=255)
                                                                                                                                                                                                   aTCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGa                                                                   >  2:1522381/1‑288 (MQ=255)
                                                                                                                                                                                                               tCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCaaa                                                      <  2:1371105/289‑1 (MQ=255)
                                                                                                                                                                                                                  tCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTg                                                                                                                                                                                                                              <  2:1194958/118‑1 (MQ=255)
                                                                                                                                                                                                                              cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAgcgaa                                                                                                                                                                             >  2:1454582/1‑151 (MQ=255)
                                                                                                                                                                                                                              cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGaa                                                                                          <  1:1407971/238‑1 (MQ=255)
                                                                                                                                                                                                                              cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGaa                                                                                          <  1:2201352/238‑1 (MQ=255)
                                                                                                                                                                                                                              cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCCGGTTGACCGGCAAATCAAACGCCATCTGACGAt                                        >  2:1202713/1‑288 (MQ=255)
                                                                                                                                                                                                                                        ccccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATg                                                                                                    >  1:591571/1‑218 (MQ=255)
                                                                                                                                                                                                                                        ccccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgct                                                                                             <  1:1100311/225‑1 (MQ=255)
                                                                                                                                                                                                                                          ccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGTATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCAt                                                                                                                                                    <  2:964402/168‑1 (MQ=255)
                                                                                                                                                                                                                                           cAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCcgcaacgca                          >  2:410614/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGcc                     >  2:2303397/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGcc                     >  1:1012619/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCCTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTAACTGCTCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCACATCAAACGCCATCTGACGATCCGCCCGCAACCCAATGcc                     >  2:242576/1‑288 (MQ=255)
                                                                                                                                                                                                                                                      cACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGctc               <  1:410614/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGa                                                                                                                                                                                                  <  2:2151401/108‑1 (MQ=255)
                                                                                                                                                                                                                                                        cGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                              >  1:965128/1‑192 (MQ=255)
                                                                                                                                                                                                                                                        cGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGctct              >  2:1724878/1‑288 (MQ=255)
                                                                                                                                                                                                                                                         gCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCa                                                                                                  <  1:2671728/203‑1 (MQ=255)
                                                                                                                                                                                                                                                                gATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAAc     <  1:56576/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATccgcccg                                 <  2:547575/259‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                              >  2:1080108/1‑181 (MQ=255)
                                                                                                                                                                                                                                                                   aGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTg  >  1:1475556/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                            
GCGCTTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACTGTGCAAATTCAATATATTGCAGGAAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCAGTTTTGCGTTTGTCAGCAGTCTCAAGCGGCGCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAAGCTCGCACTTGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGGCTACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGGCTCTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTG  >  CP042583/1498123‑1498670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A