Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,498,544 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,498,5440GC100.0% 868.0 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (185/178);  total (185/178)
*CP0425831,498,5450CG99.7% 856.7 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (183/178);  total (185/178)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,498,5460TA99.7% 869.4 / NA 363intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (185/177);  minor base G (0/1);  total (185/178)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 363 total aligned reads displayed.

GCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAAGCTCGCACTTGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGGCTACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGGCTCTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAA  >  CP042583/1498265‑1498822
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
gcAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAATGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGGTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACt                                                                                                                                                                                                                                                                                 <  2:2299156/288‑1 (MQ=255)
   gTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGAt                                                                                                                                                                                                                                                                              <  2:2738082/288‑1 (MQ=255)
     tACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGAt                                                                                                                                                                                                                                                                              <  1:1972796/286‑1 (MQ=255)
       cgccgcCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                                                                                                                                                                         <  1:1137632/289‑1 (MQ=255)
       agcccccTTGGTAGGAATTAATCGCCGGATACAAGGTTCGCGCCGCATCTGTCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                                                                                                                                                                         <  2:508804/288‑1 (MQ=255)
         ccgccTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                                                                                                                                                                                       <  2:1194492/289‑1 (MQ=255)
                      aaTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGc                                                                                                                                                                                                                                                            <  1:2221915/287‑1 (MQ=255)
                       aTTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCAc                                                                                                                                                                                                                                                          <  1:21657/288‑1 (MQ=255)
                        ttAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCAACCCCATCATCTCTTCACCGTAGAATCCAct                                                                                                                                                                                                                                                         >  1:162894/1‑288 (MQ=255)
                                cGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑c                                                                                                                                                                                                                                                >  1:962486/1‑288 (MQ=255)
                                      acaGGTTCACGCCGCATCTGTCAAAACTCCGCCCTTAAACACCCCGATAACTCCCCCACCGCTAACCACGCTGAGCGCTAGCCCCTTTCAACGACGCTGATGTCAACCCATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAACCGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGt                                                                                                                                                                                                                                         <  2:434185/287‑1 (MQ=255)
                                        aGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCa                                                                                                                                                                                                                                                           >  1:1162440/1‑270 (MQ=255)
                                        aGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCa                                                                                                                                                                                                                                                           <  2:1162440/270‑1 (MQ=255)
                                              aCGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                                                                                                                                                                         >  1:1311274/1‑250 (MQ=255)
                                                     aTCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGa                                                                                                                                                                                                                           >  1:1798166/1‑288 (MQ=255)
                                                              aCATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAACGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                                                                                                                                                                                     <  1:2450563/254‑1 (MQ=255)
                                                                 tCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCaaa                                                                                                                                                                                                              <  2:1371105/289‑1 (MQ=255)
                                                                   cTCACTTACACATCCCGATACCGCCCCAACAGCTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACg                                                                                                                                                                                                            <  2:123565/289‑1 (MQ=255)
                                                                   cTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAATCCCCTGGGTAGTGCGCAGGTTGACCGGCAAATCaaa                                                                                                                                                                                                              >  2:1072963/1‑288 (MQ=255)
                                                                   cTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACg                                                                                                                                                                                                            <  1:2404906/289‑1 (MQ=255)
                                                                          acacATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTg                                                                                                                                                                                                     >  1:2059573/1‑289 (MQ=255)
                                                                                cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGaa                                                                                                                                                                                                                                                   <  1:1407971/238‑1 (MQ=255)
                                                                                cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGAt                                                                                                                                                                                                >  1:1594349/1‑288 (MQ=255)
                                                                                cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGAt                                                                                                                                                                                                >  2:1129722/1‑288 (MQ=255)
                                                                                cccGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGAt                                                                                                                                                                                                >  1:586873/1‑288 (MQ=255)
                                                                                        caccccAACCTATAACCACGCTGGGCGATAGCACCGTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCcgca                                                                                                                                                                                       <  2:962486/287‑1 (MQ=255)
                                                                                          ccccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCAcc                                                                                                                                                                                                                                                                     >  2:1778274/1‑210 (MQ=255)
                                                                                          ccccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCAACTGACGATCCGCCcgcaa                                                                                                                                                                                      >  2:1264826/1‑288 (MQ=255)
                                                                                           cccAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCcgcaac                                                                                                                                                                                     >  2:56576/1‑288 (MQ=255)
                                                                                             cAACCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCcgcaacgca                                                                                                                                                                                  <  1:1855697/289‑1 (MQ=255)
                                                                                               aCCGATAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAAt                                                                                                                                                                                >  1:287470/1‑289 (MQ=255)
                                                                                                   aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCTTCATCCAGCACTGGCAGGAACAGCGACTCACTGATCTCTTCACCGTCGAATGCACTGCCGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGCCAAATCAAACGCCATCTGACGATCCGCAcgcaaagcatgcc                                                                                                                                                                              >  2:834942/1‑283 (MQ=255)
                                                                                                   aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGa                                                                                                                                                                                                                           <  2:405127/242‑1 (MQ=255)
                                                                                                   aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGcc                                                                                                                                                                             >  1:1012619/1‑288 (MQ=255)
                                                                                                   aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGcc                                                                                                                                                                             >  1:307578/1‑288 (MQ=255)
                                                                                                   aTAACCACGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCCTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTAACTGCTCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCACATCAAACGCCATCTGACGATCCGCCCGCAACCCAATGcc                                                                                                                                                                             >  2:242576/1‑288 (MQ=255)
                                                                                                          cGCTGAGCGATAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGctct                                                                                                                                                                      >  2:1724878/1‑288 (MQ=255)
                                                                                                                    tAGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGcc                                                                                                                                                                                                          >  2:1093660/1‑242 (MQ=255)
                                                                                                                     aGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCa                                                                                                                                                                                                                                                                       <  1:1080108/181‑1 (MQ=255)
                                                                                                                     aGCACCTTTCAACGACGCTGATGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTg                                                                                                                                                          >  1:1475556/1‑289 (MQ=255)
                                                                                                                                 cgacgctgatGTCAACACATCCAGCGCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGATCAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCTGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCggg                                                                                                                                              <  1:383040/280‑1 (MQ=255)
                                                                                                                                    cgctgatGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGCTAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCTCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCTTAGAATGCACTGCTGAAT‑CCCTCGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGCAAACAATCGGGaca                                                                                                                                           >  2:2607367/7‑287 (MQ=255)
                                                                                                                                    cgctgatGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCaaa                                                                                                                                                                                                              >  2:794894/7‑222 (MQ=255)
                                                                                                                                    cgctgatGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCaaa                                                                                                                                                                                                              <  1:794894/216‑1 (MQ=255)
                                                                                                                                         atGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCtt                                                                                                                                                                                                                                                                         >  1:1928735/2‑159 (MQ=255)
                                                                                                                                           gtcaaacaaTCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACGCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCg                                                                                                                                    <  2:1450916/281‑1 (MQ=255)
                                                                                                                                             caaacaatacAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATGAACGCCGGATGACACATCACCTCCAGCGAACGCTCACCCCGATGGCCTGCGTCATCCAGGACTTGCAGGAACAGCGACTCACTGAGCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCggg                                                                                                                                  <  2:1594349/280‑1 (MQ=255)
                                                                                                                                             cAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCggg                                                                                                                                  <  2:1510169/289‑1 (MQ=255)
                                                                                                                                                          tCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGcaca                                                                                                                      <  2:1475556/288‑1 (MQ=255)
                                                                                                                                                            cGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatga                                                                                                                   >  1:1722207/1‑289 (MQ=255)
                                                                                                                                                              ttAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatg                                                                                                                 >  1:822961/1‑289 (MQ=255)
                                                                                                                                                                aaGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatgat                                                                                                               <  1:487623/289‑1 (MQ=255)
                                                                                                                                                                   agggggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAACCGCCGGATGACCCATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATgg                                                                                                             <  2:2537061/285‑1 (MQ=255)
                                                                                                                                                                    gTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATgg                                                                                                             <  1:2303397/287‑1 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGTATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatg                                                                                                                 <  1:1877813/281‑1 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                                                                                                                                                                                     <  1:2274163/150‑1 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCActgctg                                                                                                                                                                                                                                                     >  2:2274163/1‑150 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatga                                                                                                                >  1:2367638/1‑282 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTa                                                                                                          >  2:370942/1‑288 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCAGCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatgatgccaa                                                                                                          >  2:894850/1‑284 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACCCCATCTGACGCACCGCCCGCAACCCAATGCCCTGCTCTGCCGCAACCCTGGCAACAATCGGGAAAATCTCCGGGCACATATGCACAGTATGATTGCTa                                                                                                          >  2:2496976/1‑288 (MQ=255)
                                                                                                                                                                      gggAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGCCCTGCGTCATCCAGCACTTGCAGGACCAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTCGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCCGCCGCAACCCTGGCAACCATCGAGAAAATCTGCGAGAACATAGGCACatgatgcacgctat                                                                                                         >  2:2332886/1‑281 (MQ=255)
                                                                                                                                                                        gAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGTGGGAACATATGCACATGATGATGGCTATCa                                                                                                       >  1:1102230/1‑289 (MQ=255)
                                                                                                                                                                         aaaCAGGAAGCGCTCTGACGGATAGTATTATCGATAAAAGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCAAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCa                                                                                                       <  2:72915/288‑1 (MQ=255)
                                                                                                                                                                          aaCAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCCCCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAg                                                                                                     <  2:270468/289‑1 (MQ=255)
                                                                                                                                                                             aGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCcgcaacg                                                                                                                                                                                    <  2:1407613/207‑1 (MQ=255)
                                                                                                                                                                             aGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAg                                                                                                     >  2:19339/1‑286 (MQ=255)
                                                                                                                                                                                aaGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGACTGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCGCTGCTCTCCCGCAACCCTGCCCACCATCGGCAAACTCTGCGGGACCATCGGAACAGGATGATGTCTATCaactgtct                                                                                                >  2:1877813/1‑282 (MQ=255)
                                                                                                                                                                                aaGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGTTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGt                                                                                               <  2:629522/289‑1 (MQ=255)
                                                                                                                                                                                     ctctGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGtt                                                                                          <  1:624706/289‑1 (MQ=255)
                                                                                                                                                                                     ctctGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGtt                                                                                          <  1:1522381/289‑1 (MQ=255)
                                                                                                                                                                                      tctGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGAt                                                                                                   <  2:2182689/279‑1 (MQ=255)
                                                                                                                                                                                       ctGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGttt                                                                                         >  2:2035101/1‑288 (MQ=255)
                                                                                                                                                                                         gACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATgg                                                                                                             <  2:1617936/266‑1 (MQ=255)
                                                                                                                                                                                         gACGGATAGCATTATACATAAGCGCCGGATGACACATCACCTCCAGCGAAGTATCACCCGGATGGCCGGCGTCATCCAGGACTTGCAGGAACAGCGACTCACTGAGCTCTTCACCGAAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCg                                                                                      <  2:293834/289‑1 (MQ=255)
                                                                                                                                                                                                aGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGCTGCGTAGGTTTGCGTCCAAAt                                                                               >  2:1312969/1‑289 (MQ=255)
                                                                                                                                                                                                aGTATTATCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGAAGGTTAGGTTTGCGTCCAAAt                                                                               >  2:1672924/1‑289 (MQ=255)
                                                                                                                                                                                                    ttatCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGa                                                                                                                                                                                                                                                                <  2:320900/109‑1 (MQ=255)
                                                                                                                                                                                                       tCGATAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCaa                                                                        >  1:2593931/1‑289 (MQ=255)
                                                                                                                                                                                                          aTAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGcaacaa                                                                                                                                                   <  1:999592/211‑1 (MQ=255)
                                                                                                                                                                                                          aTAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGa                                                                                                                                 >  1:1267450/1‑229 (MQ=255)
                                                                                                                                                                                                           tAAACGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGa                                                                     <  1:1335452/288‑1 (MQ=255)
                                                                                                                                                                                                           tAAACACCGGAGGACACCTCACCTCCAGCGACCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGa                                                                     <  2:586873/288‑1 (MQ=255)
                                                                                                                                                                                                            aaaCGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCggg                                                                                                                                  >  1:1181102/1‑226 (MQ=255)
                                                                                                                                                                                                            aaaCGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATgg                                                                                                             >  1:1757161/1‑247 (MQ=255)
                                                                                                                                                                                                            aaaCGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGaa                                                                    >  1:1214863/1‑288 (MQ=255)
                                                                                                                                                                                                            aaaCGCCGGATGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGaa                                                                    >  1:545631/1‑288 (MQ=255)
                                                                                                                                                                                                                     aTGACACATCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAAt                                                            >  1:2517816/1‑287 (MQ=255)
                                                                                                                                                                                                                         cacaTCACCTCCAGCGAACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATactgac                                                      <  2:1214863/289‑1 (MQ=255)
                                                                                                                                                                                                                                 ctccagcgaaCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACatgatgat                                                                                                               <  2:1291847/215‑1 (MQ=255)
                                                                                                                                                                                                                                   ccagcgaaCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGTCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTc                                            <  1:2542845/282‑1 (MQ=255)
                                                                                                                                                                                                                                    cagcgaaCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGa                                                                     <  1:2716765/257‑1 (MQ=255)
                                                                                                                                                                                                                                      gcgaaCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGtt                                                                                          >  2:2675193/5‑240 (MQ=255)
                                                                                                                                                                                                                                      gcgaaCGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGtt                                                                                          <  1:2675193/236‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccGAGGGCCTGCGTCATCAAGAACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTcc                            <  2:1550815/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            tGCGTCATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACg                                                                                                                                                                                                            <  1:359494/104‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cATCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtc              <  2:545631/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tCCAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtct             >  1:752325/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                    ccAGCACTTGCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCAtct             >  1:405128/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             gCAGGAACAGCGACTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCaa  >  2:186688/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
GCAGTTACGCCGCCTTTGTAGGAATTAATCGCCGGATGCAAGGTTCACGCCGCATCTGGCAAACATCCTCACTTACACATCCCGATAACTCCCCAACCGATAACCACGCTGAGCGATAGCACCTTTCAAGCTCGCACTTGTCAACACATCCAGCTCCGTTAAGCGTGGGAAACAGTAAGCACTCTGACGGATAGTATTATCGATAAACGCCGGATGACACATCACCTCCAGGCTACGATCACCCCGATGGCCTGCGTCATCCAGCACTTGCAGGAACAGGCTCTCACTGATCTCTTCACCGTAGAATGCACTGCTGAAT‑CCCTGGGTAGTGCGCAGGTTGACCGGCAAATCAAACGCCATCTGACGATCCGCCCGCAACGCAATGCCCTGCTCTGCCGCAAACCTGGCAACAATCGGGAAAATCTGCGGGAACATATGCACATGATGATGGCTATCAAGATGCGTAGGTTTGCGTCCAAATAGCTCAATGAAACGCAAATACTGACTGACAAGCTCCTGAGTAATTTCTTCCAGCGGTAAAGCATCTTCTTCTGCCAA  >  CP042583/1498265‑1498822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A