Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,510,308 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,510,3080GC99.6% 598.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (124/130);  total (124/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,510,3090CG99.6% 601.5 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (124/130);  minor base A (0/1);  total (124/131)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,510,3100TA99.2% 592.4 / NA 255intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (123/127);  minor base G (0/2);  total (124/131)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 256 total aligned reads displayed.

CAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGACGCG  >  CP042583/1510024‑1510583
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                 
cAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGTGTAATGATGCGACAGCCCTAACAGCCCGTCGAAAATGCCTTCCCCGGCGTTCCATGCACCCCCTCCTCGGAAACAATCC‑TCCCAGGGTTAAGCGTGCCGGGGCATGGTAAgtgcg                                                                                                                                                                                                                                                                                 >  2:1181640/1‑285 (MQ=255)
                   aTAAACGGACGCTCGTGCGGCGGGATCACGGCCGGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCAt                                                                                                                                                                                                                                                              <  2:574509/289‑1 (MQ=255)
                       accgtcGCTCGTGCGGCGGGCTCACGGCCTGGGGGAATCCCGCATCGGCAAGGTCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTA‑CAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGcc                                                                                                                                                                                                                                                         <  1:1040671/284‑1 (MQ=255)
                        gggactgtCGTGCGGCGGGATCACGGCCTGGTGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAACCGGTGCCGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGGCCGACTCCAGGCTCGCCATCGGcc                                                                                                                                                                                                                                                         <  1:973061/282‑1 (MQ=255)
                           aCGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCAt                                                                                                                                                                                                                                                       <  1:2252302/288‑1 (MQ=255)
                             gCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgcg                                                                                                                                                                                                                                                    <  2:1788347/289‑1 (MQ=255)
                             gCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgcg                                                                                                                                                                                                                                                    <  1:1516512/289‑1 (MQ=255)
                                         ggATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGCAAA‑AAACCAGCCCGGGGGTAAGCGTGGCGGGCATTGCTCACGAGGCCGACTCCCGGCTCGACACCGGGCATGGGCAGGAAGCTGCg                                                                                                                                                                                                                                        >  1:1022943/1‑289 (MQ=255)
                                            tCACGGCCGGGGGGATTCCTGCATCGGCAAGGGCTTTCATTTTCAGTACGCCCCGCTTTGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAACTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGc                                                                                                                                                                                                                                      <  2:878328/288‑1 (MQ=255)
                                                            tCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGc                                                                                                                                                                                                                     >  1:2140419/1‑289 (MQ=255)
                                                            tCCCGCAACGGCAAGGGCTTCAATTTTCAGGAAGCCCGGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGc                                                                                                                                                                                                                     <  2:1335918/289‑1 (MQ=255)
                                                              ccGCTTCGGCAAGGGCTTTCATTTTCAGTAAGCACTGCTTCGCAGCCAGGCGCGGGTTAGACACCGGAAAGCGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGa                                                                                                                                                                                                                   <  2:215825/289‑1 (MQ=255)
                                                               cGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGAt                                                                                                                                                                                                                  <  1:2307541/289‑1 (MQ=255)
                                                                      gCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATCCCCGGCGCTTGGGCCATGGTTAcc                                                                                                                                                                                                           >  2:2426132/1‑289 (MQ=255)
                                                                      gCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCCGAGGCATACCAGGCCCCGGGGGCATGGTTAcc                                                                                                                                                                                                           >  2:402464/1‑289 (MQ=255)
                                                                        aaGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCgg                                                                                                                                                                                                         <  1:1138756/289‑1 (MQ=255)
                                                                         aGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGa                                                                                                                                                                                                        <  2:146221/289‑1 (MQ=255)
                                                                            gCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAACTGGGGCCTACCAGGCCCCGGGGCGATGGTTACCGGAAg                                                                                                                                                                                                      >  2:480399/1‑288 (MQ=255)
                                                                                tCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCt                                                                                                                                                                                                                                                                    <  2:2322433/222‑1 (MQ=255)
                                                                                tCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCt                                                                                                                                                                                                                                                                    >  1:2322433/1‑222 (MQ=255)
                                                                                      tCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATgcc                                                                                                                                                                                            >  1:721339/1‑288 (MQ=255)
                                                                                          tAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGa                                                                                                                                                                                                        >  2:2504879/1‑272 (MQ=255)
                                                                                               ccTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                                                                                                                                                  <  1:155046/289‑1 (MQ=255)
                                                                                                cTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGGTACCGGa                                                                                                                                                                                                        >  2:1009424/1‑266 (MQ=255)
                                                                                                 tGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcgc                                                                                                                                                                                <  1:941449/289‑1 (MQ=255)
                                                                                                  gCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCaa                                                                                                                                                                                                >  1:612676/1‑272 (MQ=255)
                                                                                                  gCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCaa                                                                                                                                                                                                <  2:612676/272‑1 (MQ=255)
                                                                                                        ccgccAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGTCATCGGCCATGCCGCGTAACTCGACGCAAACCAGGCCCCGGGGCGGTGGCTACCGGAAGCCCCCATTCCGCCGAATggtcgggcactg                                                                                                                                                                         >  2:1253710/1‑279 (MQ=255)
                                                                                                        ccgccAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCAAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTCGCGGGCAATGTTAACGATTCCGACCCCAGGCGCGCCACCGGCCATGCGCAGTAATCCACCGCATACCAGCCGCTGGCGCGGTGGTTACCGTAAGCACCAATGCCGCCGACATGCGCGGTACTg                                                                                                                                                                         >  2:734342/1‑289 (MQ=255)
                                                                                                                      ttAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAACCGACGGGCCGGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAg                                                                                                                                                           <  1:2563398/289‑1 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGCAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTACTCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCCCCAATGCCGCCGAATGGCGCGGTACCGGCAGCCACGGTACGCGGTTTGt                                                                                                                                                   >  2:1624902/1‑288 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGACA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGGAATCTGCGGCCTACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAAGGCCGCCGAATGGCGCGGTACTGGCAGCACCGGGAACAGGTCTGt                                                                                                                                                   >  2:30314/1‑288 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGgcgc                                                                                                                                                                                                                           >  1:1861762/1‑216 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGgcagca                                                                                                                                                                   >  1:1061809/1‑272 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGgcagca                                                                                                                                                                   <  2:1061809/272‑1 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt                                                                                                                                                   >  1:630734/1‑288 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGt                                                                                                                                                   >  1:1927012/1‑288 (MQ=255)
                                                                                                                               tGAAAACGGTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACGTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt                                                                                                                                                  <  1:1945218/289‑1 (MQ=255)
                                                                                                                                      ggTGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATATCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATCCCGCCGAATGGCGCGGTACTGGCAGCGCCGGTAACCGGTTTTTTCCGGTTa                                                                                                                                           >  2:2250205/1‑289 (MQ=255)
                                                                                                                                        tGACGGGTAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGt                                                                                                                                                              >  1:1158432/1‑268 (MQ=255)
                                                                                                                                               tAGAGGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATccc                                                                                                                                   >  1:2015803/1‑288 (MQ=255)
                                                                                                                                                  agGCTTCATTACCAAACGACAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGCCAGCACCGGTAAGCGGTTTGTTCCAGTTAACCATCaccgc                                                                                                                                >  2:2302201/1‑288 (MQ=255)
                                                                                                                                                      ttCATTACCAACCGACAGGCCCGCGTAAGGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTAATCGAACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCcgcg                                                                                                                           <  1:1003270/289‑1 (MQ=255)
                                                                                                                                                        caataccaacagacAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGCATTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGcc                                                                                                                         <  2:2516380/276‑1 (MQ=255)
                                                                                                                                                         attaccaaccggcAGGCCCCCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCt                                                                                                                        <  1:1181640/277‑1 (MQ=255)
                                                                                                                                                           taccaaccgacAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTcc                                                                                                                      <  1:2499853/279‑1 (MQ=255)
                                                                                                                                                                   cacAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCTATATTTACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑CATCCATCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATTCGCAGTCATCTGCTGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCaa                                                                                                                 <  1:2639974/284‑1 (MQ=255)
                                                                                                                                                                         cccGGGAAATGAGCCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGt                                                                                                             <  2:1502435/284‑1 (MQ=255)
                                                                                                                                                                           cgcgTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGTTACTGGACCCACCGGTAAGCGGTTTGTTCCAGTGAAAACTCCCCGCCCCCGCCCCCCGCACCAGTTGATCGa                                                                                                      >  2:1605465/1‑289 (MQ=255)
                                                                                                                                                                                  tgatgCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGt                                                                                                                                                                             >  2:2339503/1‑211 (MQ=255)
                                                                                                                                                                                    atgCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTcc                                                                                              >  2:180428/1‑288 (MQ=255)
                                                                                                                                                                                      gCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCCCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCg                                                                                            >  2:2591141/1‑288 (MQ=255)
                                                                                                                                                                                       cGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt                                                                                                                                                  >  1:75330/1‑233 (MQ=255)
                                                                                                                                                                                       cGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt                                                                                                                                                  <  2:75330/233‑1 (MQ=255)
                                                                                                                                                                                       cGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCCCCAGCAACAGTTGAGCGAACTTTTCCCgt                                                                                           >  2:1088135/1‑287 (MQ=255)
                                                                                                                                                                                        gtaacccatcccagccagTCAAAATTGACTCCCCAGGCGTGCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCt                                                                                          <  2:2684221/278‑1 (MQ=255)
                                                                                                                                                                                        gTCAGCCCTACCAGCCCGTCGAAATTGACCTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCt                                                                                          <  1:2516956/288‑1 (MQ=255)
                                                                                                                                                                                         tggacccAACCATCCCGTCGCAAGTGACTACCCAATGGTCCATCCCACAGCCGCATCGGACA‑CCTCCGGCCCGGGGTCAGACGGGGCGGGCAATGTTAGCGAGTCCGACTCTCGGCCGGCGATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGGGATGCTTACCGGAAGAACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAAGCCCCGTCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCg                                                                                        <  2:643664/285‑1 (MQ=255)
                                                                                                                                                                                           ggcccacccAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCggg                                                                                      <  2:1927012/282‑1 (MQ=255)
                                                                                                                                                                                            gCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATgcg                                                                                                                                                                                                                                                    >  1:2711702/1‑130 (MQ=255)
                                                                                                                                                                                            gCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCgggg                                                                                     >  1:2622084/1‑289 (MQ=255)
                                                                                                                                                                                                 aCCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCTAACTTTTCCCGCCCGGGGGaac                                                                                 >  1:374882/1‑287 (MQ=255)
                                                                                                                                                                                                     gCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGa                                                                            <  1:180428/289‑1 (MQ=255)
                                                                                                                                                                                                      cccGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGACTGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCCCCCGCAACAGCGGACCGAACTTTTCCCGCCCTGGGGACACCAGa                                                                            >  2:86701/1‑288 (MQ=255)
                                                                                                                                                                                                      cccGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCa                                                                              <  1:1781538/286‑1 (MQ=255)
                                                                                                                                                                                                       ccGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgcg                                                                                                                                                                                 >  2:1152448/1‑186 (MQ=255)
                                                                                                                                                                                                          tCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                                                                                                                                                  <  1:2363908/182‑1 (MQ=255)
                                                                                                                                                                                                          tCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGgc                                                                                                                                                                                  >  2:2363908/1‑182 (MQ=255)
                                                                                                                                                                                                          tCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAGCTGCGGCAGACCAGGCGCTGGGGCGATGGTTACGGGAAGCACCAAGGGCGCCGAAGGGCGCGGTACTGGGAGGACCGGTAAGCGGGTGGGGCCCGGGAACAAGCCGCGGACGCGCCTCGAGCAAACGTTGAGGGAAATTTTCCCGCGCGGGGGAAACCAGAGCGCa                                                                       >  2:382830/1‑289 (MQ=255)
                                                                                                                                                                                                          tCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGACCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCCGCACAAGGTTATCGAAATTTTCCCGCCCGGTGGAAACCAGGCCTCa                                                                       >  2:1881989/1‑289 (MQ=255)
                                                                                                                                                                                                           cGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCggt                                                                                                                                                                                                        >  2:93755/1‑158 (MQ=255)
                                                                                                                                                                                                                        ccAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGc                                                         <  1:386492/289‑1 (MQ=255)
                                                                                                                                                                                                                             cGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGa                                                       <  1:480399/286‑1 (MQ=255)
                                                                                                                                                                                                                               ttCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCa                                                                              <  2:2113739/261‑1 (MQ=255)
                                                                                                                                                                                                                               ttCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCa                                                                              >  1:2113739/1‑261 (MQ=255)
                                                                                                                                                                                                                               ttCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGtt                                                  >  2:2008307/1‑289 (MQ=255)
                                                                                                                                                                                                                                 cATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAt                                                                                                                                                                                                                                             <  1:2533203/100‑1 (MQ=255)
                                                                                                                                                                                                                                 cATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAAt                                                                                                                                                                                                                                             >  2:2533203/1‑100 (MQ=255)
                                                                                                                                                                                                                                 cATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGtt                                                                                                                                                  <  1:203429/191‑1 (MQ=255)
                                                                                                                                                                                                                                 cATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCt                                                                                          <  1:506662/247‑1 (MQ=255)
                                                                                                                                                                                                                                 cATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCCCAAGCAACCGTCTATCGAACTTTTCCCCCTCGGGGCAAACCAGACCGCACGGAAGCCCGAAACGAGAGttgt                                                >  2:2095171/1‑287 (MQ=255)
                                                                                                                                                                                                                                  aTCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCAGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTACAGCAACAGTTGAACGAACTTTTCCCGCCCGGGGGAAACCAGACCGACAGAGAGGCCGAAACGAGTGTTAt                                                >  1:1670597/1‑288 (MQ=255)
                                                                                                                                                                                                                                            cTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGaa                                                                                                                                                                                      <  2:326601/144‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAg                                                                                                                                                           <  1:250838/169‑1 (MQ=255)
                                                                                                                                                                                                                                              cATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGt                                                                                                                                                       >  1:867095/1‑173 (MQ=255)
                                                                                                                                                                                                                                                 cGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCACACCAGGCGCTGGGGCGATGGTTACCGGCAGCACCAATGCCGCCGACTGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCCCCGGGGCAAACAGACCGCACGAGAGTCCCGAGCGAGTGGTATCAGCCAGTAGAATct                                 >  2:171959/1‑287 (MQ=255)
                                                                                                                                                                                                                                                  ggAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCt                               <  1:1612449/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aggaaaagcacggCCCGGGATAAGACGTGGCGGGGAAGGTAAACGCGTCCGGCTCCAGGCGCGCCAACGGCAATGCGCAGGAATCTGCGGGATACGGGGCGCTGGGGGGATGGTTACCGGAAGGACAACGGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGc                                <  2:2458900/277‑1 (MQ=255)
                                                                                                                                                                                                                                                        aaTCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATc                          <  2:2705951/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          tCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGa                        <  1:421701/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cccGGGGGTATGCGTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCa                                                                              <  1:1481731/230‑1 (MQ=255)
                                                                                                                                                                                                                                                                            gTGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAg       <  1:1284700/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGGCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGa      <  1:579957/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             gggCGGGCAATGTGAACGAGTCCGACGCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGa      <  2:1749488/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ggcggcCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCaaaa                                                                    >  1:2464479/1‑223 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAag                                                                     <  2:1107077/224‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAag                                                                     >  1:1107077/1‑224 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGAc     >  2:505343/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              ggCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTAATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGAc     >  1:1343069/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                               gCGGGCAATGTTAACGAGTCCGACTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGAcg    <  1:2686592/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                 
CAACTGACGCAGCACCGGAATAAACGGACGCTCGTGCGGCGGGATCACGGCCTGGGGGAATCCCGCATCGGCAAGGGCTTTCATTTTCAGTAAGCCCTGCTTCGCCGCCAGTCGCGGGTTAGACACCTGAAAACGGTGACGGGTAGAGGCTTCATTACCAAAGCTCAGGCCCGCGTAATGATGCGTCAGCCCTACCAGCCCGTCGAAATTGACTTCCCAGGCGTTCATCGCACCACCTCATCGGAAA‑AATCCAGCCCGGGGTTAAGCGTGGCGGGCAATGTTAAGCTGTCGCTCTCCAGGCTCGCCATCGGCCATGCGCAGTAATCTGCGGCATACCAGGCGCTGGGGCGATGGTTACCGGAAGCACCAATGCCGCCGAATGGCGCGGTACTGGCAGCACCGGTAAGCGGTTTGTTCCAGTTAACAATCCCCGCCCGCGCCTCCAGCAACAGTTGATCGAACTTTTCCCGCTCGGGGGAAACCAGACCGCAAGAGAGTCCGAAGCGAGTGTTATTCGCCATTCGAATCGCTTCATCGAAAGTATCATAACGCCAGACGCG  >  CP042583/1510024‑1510583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A