Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,510,923 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,510,9230GC99.2% 590.2 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (122/126);  total (123/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,510,9240CG99.2% 580.1 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (120/127);  total (123/128)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,510,9250TA99.6% 589.0 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (122/128);  minor base G (1/0);  total (123/128)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 251 total aligned reads displayed.

CCCCGGCGTCAGCAAGCTTGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCG‑CTCTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCGCTTCGCCACTCCA  >  CP042583/1510644‑1511204
                                                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                                                       
 cccGGCGTCAGCAACGATGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATgg                                                                                                                                                                                                                                                                                 >  2:478828/1‑289 (MQ=255)
  ccGGCGTCAGCAACGATGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATgg                                                                                                                                                                                                                                                                                 >  2:413795/1‑288 (MQ=255)
   cgacGTCAGCAACGATGTCCCTGATTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCAACGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTc                                                                                                                                                                                                                                                                               <  1:808409/286‑1 (MQ=255)
   cGGCGTCCGCAACGATGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTc                                                                                                                                                                                                                                                                               <  1:1883014/289‑1 (MQ=255)
          agcaacgatGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTc                                                                                                                                                                                                                                                                               >  2:2705294/9‑282 (MQ=255)
               cgatGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGcc                                                                                                                                                                                                                                                                   <  1:2440576/286‑1 (MQ=255)
                      ccTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTCCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGa                                                                                                                                                                                                                                                            <  1:1452698/289‑1 (MQ=255)
                       cTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTCTTCAGCAATAAACGGCGGGCGCAGGGGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACCGAAGGCTCAGATCGACAGCCCCGGCGaa                                                                                                                                                                                                                                                           >  2:684480/1‑288 (MQ=255)
                                    gcgcGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAAGCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCCTCGCCCTGCGCACCGCTTTTCAGCACTAAACGGCGCGCGCAGGGTCCGCGTTGCCCGGC‑GTGTACAAA‑GCGCCACTGACTGGTAAGGAGAAGAGCGCGGTCGATATCCGCAACCTc                                                                                                                                                                                                                                               >  2:2666023/1‑288 (MQ=255)
                                     cgcgGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACcaca                                                                                                                                                                                                                                              >  1:1596220/1‑288 (MQ=255)
                                          cgcagtcagggtcagtcCGCCCTTCGCTTCCAGTTGCTCCCATGCCGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGAt                                                                                                                                                                                                                                         <  1:1469655/274‑1 (MQ=255)
                                                 aGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   <  1:526509/287‑1 (MQ=255)
                                                 aGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   <  1:1529228/287‑1 (MQ=255)
                                                    ggTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGat                                                                                                                                                                                                                              >  1:2672073/1‑289 (MQ=255)
                                                    ggTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGat                                                                                                                                                                                                                              >  1:75395/1‑289 (MQ=255)
                                                    ggTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCCGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGGCGCGTGGATATCCGCCGACTCATCGAGAAGTATCGGat                                                                                                                                                                                                                              >  1:1111767/1‑289 (MQ=255)
                                                         tctgCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGCTCGTCATCCCAGTTGCACGGCGTTAATCGCTGGCTGCCGGCAACCAGACGCGCAAGAAACGCCACGCCCTGCGCCCCGGTTTTCCGCAATAAACGCCGGGCGCAGGCGCAGCATTGACCGCCTGTT‑ACAAACCCC‑TACTGACACGTCCGATGGACAGCCGACTCAGTTGCCGCCACCCCCTCACCAATTAACGGattatt                                                                                                                                                                                                                          >  2:1476915/4‑288 (MQ=255)
                                                         tcCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATg                                                                                                                                                                                                                                                                                  <  2:1019418/232‑1 (MQ=255)
                                                         tcCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATg                                                                                                                                                                                                                                                                                  >  1:1019418/1‑232 (MQ=255)
                                                         tcCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGattatt                                                                                                                                                                                                                          >  1:1001140/1‑288 (MQ=255)
                                                         tcCGCCACTTGCTTCCAGTTGCCGGCATGCAGAAACAACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGAttatta                                                                                                                                                                                                                         <  2:1210625/289‑1 (MQ=255)
                                                              ccATCGCTTCCAGTTGCTGCCATGCAGGACCCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGcc                                                                                                                                                                                                                    <  1:1503035/289‑1 (MQ=255)
                                                                    cTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCAtctc                                                                                                                                                                                                              >  1:42617/1‑289 (MQ=255)
                                                                              ctgcCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGcc                                                                                                                                                                                                                                                    <  2:260413/241‑1 (MQ=255)
                                                                              ctgcCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGcc                                                                                                                                                                                                                                                    >  1:260413/1‑241 (MQ=255)
                                                                               tgcCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   >  2:908718/1‑257 (MQ=255)
                                                                                gcCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGc                                                                                                                                                                                                                                                                    <  1:371050/223‑1 (MQ=255)
                                                                                gcCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGc                                                                                                                                                                                                                                                                    >  2:371050/1‑223 (MQ=255)
                                                                                         tAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGAttatta                                                                                                                                                                                                                         >  2:1345249/1‑257 (MQ=255)
                                                                                         tAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGAttatta                                                                                                                                                                                                                         <  1:1345249/257‑1 (MQ=255)
                                                                                           accaccTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGcc                                                                                                                                                                                                                    >  1:2147488/1‑260 (MQ=255)
                                                                                           accaccTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGcc                                                                                                                                                                                                                    <  2:2147488/260‑1 (MQ=255)
                                                                                           accaccTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGGCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCg                                                                                                                                                                                          >  2:1804197/1‑286 (MQ=255)
                                                                                                ctggtgGGCGGCCGGTAAGGAAATCGGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCg                                                                                                                                                                                  <  2:1621124/289‑1 (MQ=255)
                                                                                                     gtgCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTATCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   <  1:457187/235‑1 (MQ=255)
                                                                                                          gCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGgagaaaat                                                                                                                                                                          >  1:619888/1‑283 (MQ=255)
                                                                                                           ccTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCg                                                                                                                                                                       <  2:75395/289‑1 (MQ=255)
                                                                                                             tGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGcc                                                                                                                                                                                                                                                    >  1:548266/1‑210 (MQ=255)
                                                                                                             tGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGAt                                                                                                                                                                     >  1:1966657/1‑289 (MQ=255)
                                                                                                             tGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGAt                                                                                                                                                                     >  2:1125856/1‑289 (MQ=255)
                                                                                                              gTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGAt                                                                                                                                                                     >  1:489615/1‑288 (MQ=255)
                                                                                                              gTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCCCAAGGGCGAGAATTTTCTCCGGCGGACCGGAGAGCTGGCGac                                                                                                                                                                     >  2:965342/1‑287 (MQ=255)
                                                                                                               ttCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGGCAGATGGACAGCCGCGTCGATAACCGCCACCTCATCTATAATTAGCGGATTATTACCGCCCATCCCAAGGGCGCAAATTTTCTCCGGCTGACCGGAAAGCTGGccacg                                                                                                                                                                    >  2:1783254/1‑284 (MQ=255)
                                                                                                                tCAGAACGCAGACCGCAAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGc                                                                                                                                                                   <  2:2331603/288‑1 (MQ=255)
                                                                                                                tCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTc                                                                                                                                                                                                                                                                               <  1:172247/180‑1 (MQ=255)
                                                                                                                  aGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   <  1:589585/222‑1 (MQ=255)
                                                                                                                         aGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   >  2:308428/1‑215 (MQ=255)
                                                                                                                         aGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAg                                                                                                                                                                                                                                   >  1:2700860/1‑215 (MQ=255)
                                                                                                                         aGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTgg                                                                                                                                                             >  2:1894549/1‑285 (MQ=255)
                                                                                                                         aGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAg                                                                                                                                                          >  1:2262554/1‑288 (MQ=255)
                                                                                                                         aGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCCTTGACCGGCTGTG‑ACAAACGCC‑GACTCAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCCCATCGATCATTAGCGGCTTATTACCGCCCATCCCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGCTGCAACTGGtcc                                                                                                                                                          >  2:2229474/1‑286 (MQ=255)
                                                                                                                              gCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGt                                                                                                                                                                                                                                                               <  2:1381054/182‑1 (MQ=255)
                                                                                                                                     aaCGGCTGCGGTTCGTCCTCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGgcgc                                                                                                                                             <  1:2381727/289‑1 (MQ=255)
                                                                                                                                     aaCGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGATGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGgcgc                                                                                                                                             <  1:705281/289‑1 (MQ=255)
                                                                                                                                          cTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGa                                                                                                                                                                                                                                                                        <  1:261860/161‑1 (MQ=255)
                                                                                                                                          cTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGa                                                                                                                                                                                                                                                                        >  2:338732/1‑161 (MQ=255)
                                                                                                                                          cTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGa                                                                                                                                                                                                                                                                        <  1:338732/161‑1 (MQ=255)
                                                                                                                                          cTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGc                                                                                                                                                                   >  2:574833/1‑262 (MQ=255)
                                                                                                                                            gCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGt                                                                                                                                      <  1:1125856/289‑1 (MQ=255)
                                                                                                                                                    tCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCg                                                                                                                                        <  2:2506599/279‑1 (MQ=255)
                                                                                                                                                      aTCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGCAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCaaa                                                                                                                            <  1:382361/289‑1 (MQ=255)
                                                                                                                                                      aTCCCAGTTGCCCGGCGTTAATCGCTGACGGACGGCAACCAAACGAGAAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAACCGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCaaa                                                                                                                            <  2:1522634/289‑1 (MQ=255)
                                                                                                                                                       tCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGGATTGGCCCTACCGGTAAACAGCaaa                                                                                                                            >  1:2079222/1‑288 (MQ=255)
                                                                                                                                                        cccAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCt                                                                                                                                                                           <  2:2031566/240‑1 (MQ=255)
                                                                                                                                                              tGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCgag                                                                                                                    <  1:2563722/289‑1 (MQ=255)
                                                                                                                                                                  cGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGAtc                                                                                                                 >  1:91243/1‑288 (MQ=255)
                                                                                                                                                                         aaTCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAgcg                                                                                                         <  1:1804197/289‑1 (MQ=255)
                                                                                                                                                                         aaTCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAgcg                                                                                                         <  1:2197430/289‑1 (MQ=255)
                                                                                                                                                                              ctggcgaACGGCAACCAGACGGGCAAGAAACGCATCGCCCTGCGCCCCCCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGGTGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACt                                                                                                     <  2:2079222/288‑1 (MQ=255)
                                                                                                                                                                               tggctgACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGcc                                                                                                                                                        >  1:2228058/1‑236 (MQ=255)
                                                                                                                                                                               tggctgACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTc                                                                                                    <  1:965342/288‑1 (MQ=255)
                                                                                                                                                                                          aaCCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGAcc                                                                                         <  1:305993/288‑1 (MQ=255)
                                                                                                                                                                                                   aGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACCCAGCGCCTGACCCGTTTCAcg                                                                                >  1:948059/1‑288 (MQ=255)
                                                                                                                                                                                                     gaagaacagactCGCCCTGCGCCCCGGTTTTCAGCAATAAACGGTGGGCGCAGGTGCAGCGTTGACCGGGTGTG‑ACAAACGCC‑GACTGAATGGTCAGATAGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgcc                                                                              <  2:850147/277‑1 (MQ=255)
                                                                                                                                                                                                     caggAAACGCAGCGCCCTGCGCCCCGCTTTTCAGCAATACACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgcc                                                                              <  2:2221495/285‑1 (MQ=255)
                                                                                                                                                                                                     cAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgcc                                                                              >  2:168930/1‑288 (MQ=255)
                                                                                                                                                                                                     cAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATAGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgcc                                                                              >  1:850147/1‑288 (MQ=255)
                                                                                                                                                                                                        gtcaacgctgcaccTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCTGCTGACCGGATAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGCTCCTCCAGCGCACGCAGCGCCTGTCCCGCTGCActcccgc                                                                           >  2:514968/13‑288 (MQ=255)
                                                                                                                                                                                                        gtcaacgctgcaccTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgc                                                                               >  1:2040696/13‑284 (MQ=255)
                                                                                                                                                                                                          aaCGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCAcgcccgcc                                                                          <  1:1621867/287‑1 (MQ=255)
                                                                                                                                                                                                              cATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGgcga                                                                                                                                             <  1:773305/216‑2 (MQ=255)
                                                                                                                                                                                                              cATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCCCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGgcga                                                                                                                                             >  2:773305/1‑215 (MQ=255)
                                                                                                                                                                                                                      tGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCa                                                            <  1:2543440/289‑1 (MQ=255)
                                                                                                                                                                                                                             cGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTCCCCGTAAACAGCCAACCGACGCGATCCTCCAGCGCAACCCCCGCCGGACCCGTTTCCCGCCCGCCCTTCACCAGCTGCCGCACGc                                                      >  2:2382009/1‑288 (MQ=255)
                                                                                                                                                                                                                             cGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGc                                                      >  2:268701/1‑288 (MQ=255)
                                                                                                                                                                                                                             cGCTTTTCAGCAATAAACGGCGGGCGCAGGGGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTaa                                                                                                                                    <  2:2472873/210‑1 (MQ=255)
                                                                                                                                                                                                                                        aatagcgggggggcgGAGTGGCGGCGTTGACAGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAag                                           <  2:555463/278‑1 (MQ=255)
                                                                                                                                                                                                                                          tAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATATCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGATGGCGATGCAACTGTTAGCCTGTATTGGCGCTACCGGTTAACAGCAACCCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAaacca                                        >  1:277467/1‑289 (MQ=255)
                                                                                                                                                                                                                                          acagcgggggggccAGGTGCAGCGTGGGCCGGCTGTG‑ACAAACGCC‑AAGTGAATGGTCAGAAGGAACGCGACGTGGATATCAGCCACCGCATCGATAATTAGCGGATTATTACCGCCAATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCGCGCCCTGCACCAGGTTCCGCACGCCTGGCGGCAagcca                                        <  2:2000052/276‑1 (MQ=255)
                                                                                                                                                                                                                                            aaCGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAagccag                                       >  1:1921123/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ggcgggcgCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCctg                                   <  1:2415722/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 cgggcgCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTtctc                                                                                                                                                                                            <  1:344436/134‑1 (MQ=255)
                                                                                                                                                                                                                                                          gTGCAGCGTTGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAAc                        >  1:1404126/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  ttGACCGGCTGTG‑GAACACGCG‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTAc                 <  2:614128/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                   tGACCGGCTGTG‑ACAAACGCC‑GACTGAATGGGCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCg               <  1:1852538/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gACCGGCTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTc                                                                                                    >  1:2484038/1‑203 (MQ=255)
                                                                                                                                                                                                                                                                          cTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACCGCCGCGTCGCTATCCGCCACCTCATCGATAATTAGCGGCTTATTCCAGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGATCTTGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCTCCTAACCCGTTCCACGCCCGCCCTTCCCCAGGTTCCCCACCCCTGCCGGCCACCTATCCTGCTGCCATCAACTATTTACATCTTCGc         >  2:1848478/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          cTGTG‑ACAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCGCTTCGc         <  1:1665288/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCGCTTCGCCACTcc   <  1:1783254/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cAAACGCC‑GACTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCGCTTCGCCACTCCa  <  1:684480/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        ||||                                                                                                                                                                                                                                                                                       
CCCCGGCGTCAGCAAGCTTGTCCCTGCTTGTAATAAGCGCGGCGCAAGCAGGGGTCGTCCGCCCATCGCTTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCCGCTTTTCAGCAATAAACGGCGGGCGCAGGTGCAGCGTTGACCGGCTGTG‑ACAAACGCG‑CTCTGAATGGTCAGATGGACAGCCGCGTCGATATCCGCCACCTCATCGATAATTAGCGGATTATTACCGCCCATCTCAAGGGCGAGAATTTTCTCCGGCTGACCGGAGAGCTGGCGATGCAACTGGTAGCCTGTATTGGCGCTACCGGTAAACAGCAAACCGTCGAGATCCTCCAGCGCACTCAGCGCCTGACCCGTTTCACGCCCGCCCTGCACCAGGTTCAGCACGCCTGGCGGCAAGCCAGCCTGCTGCCATAAACGCATTACCGCTTCGCCACTCCA  >  CP042583/1510644‑1511204

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A