Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,512,647 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,512,647 | 0 | G | C | 99.3%
| 682.9
/ NA
| 290 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base C (152/136); total (154/136) |
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,512,648 | 0 | C | G | 99.0%
| 673.3
/ NA
| 290 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (3/0); new base G (150/136); total (154/136) |
| Fisher's exact test for biased strand distribution p-value = 2.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,512,649 | 0 | T | A | 98.6%
| 668.6
/ ‑4.7
| 290 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/0); major base A (149/136); minor base G (4/0); total (154/136) |
| Fisher's exact test for biased strand distribution p-value = 1.25e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 290 total aligned reads displayed.
GTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGACATCACTTCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAATTATTTCAACTACTACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCAT > CP042583/1512368‑1512914
|||
gTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATACACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTg > 1:533189/1‑289 (MQ=255)
tCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTg > 1:2722380/1‑288 (MQ=255)
ccGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGt < 1:1685231/286‑1 (MQ=255)
aGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGaa > 1:294574/1‑289 (MQ=255)
gCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAACGCGTGGCTTCACTCGCGGGaa > 2:1235464/1‑288 (MQ=255)
cGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAg < 2:2365357/288‑1 (MQ=255)
cacaGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACCCGCCGAAAGCGTGGCTTCCTTGGCGGGAAgccgcc > 2:1126994/1‑284 (MQ=255)
gCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGGCGCGTCaa > 2:1156863/1‑288 (MQ=255)
cTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACCTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGAGTGGCTTCATTGCCGGCaacctacggccg > 2:72206/1‑278 (MQ=255)
tgctgcCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGgccgc > 2:877279/1‑288 (MQ=255)
cttgcgggttggtCGTTACTGGGGAACAGCGGCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTCAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCACAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGgccgccgc < 2:1759881/277‑1 (MQ=255)
tgtgATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGttt < 1:479257/288‑1 (MQ=255)
tACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAg < 1:2676842/289‑1 (MQ=255)
agaAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAgc > 2:318412/1‑251 (MQ=255)
agaAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCa > 1:1166617/1‑289 (MQ=255)
aaCAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAt < 1:1897766/287‑1 (MQ=255)
aaCAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAt < 1:2575629/287‑1 (MQ=255)
cAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACCTAGCCCTGCTCACTTTTTGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCCTGGCTTCATTGGCGGGACGCGACGTCAGTGCGCCGCCCGTTTTGGTGGCATGCTgcagcac > 2:2623892/1‑287 (MQ=255)
cAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgc > 1:2365377/1‑289 (MQ=255)
gTCGGCAATGCGTTATAGACATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg < 1:2524611/289‑3 (MQ=255)
taGACATTCCGCTCTCTTGAGGCCAGAACCAACGTGCCCACGCGATAGTGGTACCCAGGATCGTTCA‑GCCCAACCGCCCACTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATctgatcgct < 2:2662464/289‑9 (MQ=255)
aCATTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTgg > 2:587609/1‑253 (MQ=255)
aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCTCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGGCCCTTTTTCTGGCAAGCTTGATCCGCCCCCAGACATCCGTACGCCCAACg > 2:194054/1‑289 (MQ=255)
aTTCAGCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTgg < 2:2573344/251‑1 (MQ=255)
aTTCAGCTCTTTGGAGGCGTGAACCAACGGGCCGGCGCGCTAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACg < 2:1384868/289‑1 (MQ=255)
cagctcatttgacgCGTGAACCAACTGGACGACGCGAGAGTGGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCGTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGa < 2:2319944/276‑1 (MQ=255)
gCTCTTTTGAGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGTAGCGACGTCAGGACGCCGCCCGTTTTGCTGGCAAGCGGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACg > 1:1031162/1‑289 (MQ=255)
ctcttttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGa < 1:777670/277‑1 (MQ=255)
ctcttttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACgg > 2:1697756/10‑289 (MQ=255)
ttttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATg < 1:1568855/283‑1 (MQ=255)
tttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGa < 1:2015789/284‑1 (MQ=255)
tttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGa < 1:1140719/284‑1 (MQ=255)
ttgaggCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGAc < 2:893865/285‑1 (MQ=255)
gCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACCTCTGATCGCTCAACGGGACGGATGACcatca > 1:1731455/1‑289 (MQ=255)
aaCCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCg > 2:774467/1‑196 (MQ=255)
aaCGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACC < 1:1379811‑M1/289‑1 (MQ=255)
ccGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccg > 2:625773/1‑236 (MQ=255)
gTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCCGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCCCGGATAACAAAgtgttcgc > 1:1533282‑M1/1‑281 (MQ=255)
ccAGGGATCGTTTA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaag < 1:104706‑M1/289‑12 (MQ=255)
ccAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAt > 2:967369/1‑213 (MQ=255)
ccAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCAt < 1:967369/213‑1 (MQ=255)
ccAGGG‑TCGTTCCGGCCCAACCGCCCCCCAACTGGCACAAATCCCCGCCACGGTGCCTGTCTCGCGATCTTCCAGCACGCACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaag < 2:1729036‑M1/289‑12 (MQ=255)
gggATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccga > 2:790144/1‑216 (MQ=255)
gggATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAgcgccga < 1:790144/219‑4 (MQ=255)
ggATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagca > 1:2153037‑M1/1‑274 (MQ=255)
cccAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACC < 1:2204694‑M1/251‑1 (MQ=255)
ccACCCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatc < 1:2171702‑M1/289‑28 (MQ=255)
ccAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGTCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatc < 1:1790137‑M1/289‑28 (MQ=255)
aaCCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGAt < 1:2264602/231‑1 (MQ=255)
aCCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccag > 1:2317669‑M1/1‑259 (MQ=255)
aCCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCCCAACGGGACGGATTACCATCATGATGAACCTCGGCTAACAAAgtgttagcaagcagctgcaaagcgatccag > 1:2064059‑M1/1‑259 (MQ=255)
ccGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccag > 1:802469‑M1/1‑258 (MQ=255)
aaTGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatc > 2:612950‑M1/1‑248 (MQ=255)
ccccccGCGGGGCCTGTGTCGCTTCCTTCCAGCACGAACACCTAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGGTACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgct < 2:1072217‑M1/289‑55 (MQ=255)
cccGCCACGGGGCCGGTCTCGCTATCTTCCAGCACGAACACCTAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgct < 2:2497944‑M1/289‑55 (MQ=255)
cACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgaca < 1:194054‑M1/288‑59 (MQ=255)
aCGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacatt < 1:1413848‑M1/289‑61 (MQ=255)
ggTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcggcacctcttcttcgctgacattga > 1:178013‑M1/1‑227 (MQ=255)
tGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCa < 2:574470/152‑1 (MQ=255)
ccggtccCGCTATCTTCCAGTACCACCACATAGCCCTGCTCACTTGTTGGCAGTTGTCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATGGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGATCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcg < 2:2013376‑M1/285‑66 (MQ=255)
gTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcag > 1:2180900‑M1/1‑220 (MQ=255)
gCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGAt < 2:2090449/186‑1 (MQ=255)
gCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACcat > 1:2085666/1‑192 (MQ=255)
gCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttctt > 1:1831805‑M1/1‑215 (MQ=255)
tATCTTCCAGCACGAACAAATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGATCAACGGGACGGATGACCATCACGATGAACCTCGGCTAACAAAgtgttcgcaagaaactgcaaagcgatccaatccggtcgcaaactcttcttcgcggacattgagcgcaggcgcaaaa > 1:2486751‑M1/1‑213 (MQ=255)
tCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACg > 2:36654/1‑179 (MQ=255)
tCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACg < 1:36654/179‑1 (MQ=255)
gctTCCAGCACGAACACATCGCCCTGTTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacg < 2:1333953‑M1/288‑79 (MQ=255)
tCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcac < 2:181685‑M1/289‑82 (MQ=255)
aGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccac > 1:630052‑M1/1‑205 (MQ=255)
cGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCCCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaaagcaccacgtt > 1:1211236‑M1/1‑201 (MQ=255)
gAACGCATGGCCCTGTTGCCTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCGTTTGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgc < 2:2064059‑M1/289‑90 (MQ=255)
ctctgCTAGCTGTTGGACAAGTCGCCTTGTCAGGTTGTGAGTGCCCTTGAGATACGGGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGTCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 2:1879192‑M1/287‑100 (MQ=255)
ccTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaat < 1:1716554‑M1/288‑100 (MQ=255)
gcacactTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt < 1:1604652‑M1/286‑104 (MQ=255)
gatcaCTTTTGGTCAGTTCGCCTTGCCAGGTTGTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt < 1:1107704‑M1/287‑104 (MQ=255)
gCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt < 1:1242679‑M1/289‑104 (MQ=255)
gCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagt > 1:1305698‑M1/1‑186 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTc > 1:1080923/1‑144 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgca < 1:57448‑M1/282‑98 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaaagcaccacgttgccacccgcaatcagt > 1:747927‑M1/1‑185 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctg > 2:1658772‑M1/1‑185 (MQ=255)
cTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctg < 1:1658772‑M1/240‑56 (MQ=255)
cctTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTGCGATACGGGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtacca < 2:1853866‑M1/288‑108 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgca < 2:195829‑M1/260‑81 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgca > 1:195829‑M1/1‑180 (MQ=255)
ttttGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggc < 1:68937‑M1/250‑71 (MQ=255)
ggCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgccatcagtaccatcacgc > 1:601330‑M1/1‑175 (MQ=255)
ggCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgc > 1:1329526‑M1/1‑175 (MQ=255)
ggCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaa > 2:1514723‑M1/1‑175 (MQ=255)
ttCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGAt < 1:1496956/141‑1 (MQ=255)
ttCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgca > 2:116741‑M1/1‑170 (MQ=255)
ttCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGG > 2:45450‑M1/1‑162 (MQ=255)
cGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACca > 2:1272256/1‑144 (MQ=255)
ccTTGCCTGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCCTCATGATGAACCTCGGCTAACAGAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgc < 1:994377‑M1/289‑124 (MQ=255)
tGCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgc < 2:2176688‑M1/289‑127 (MQ=255)
gCCAGGTTTTGATTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcccctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcccgcccgctttcgcccc > 2:2272962‑M1/1‑162 (MQ=255)
tttGATTCCCCTTTCGATCCGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcacctcttcttcgctgacattgagcgcaggcgcaaaacgcaccacgttgccacccgcaatcagtaccatcacgcctgctttcgccgcttcctga < 1:879996‑M1/288‑134 (MQ=255)
aTTGCCCTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCCCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatcccgtacggtcgtcacctcttcttcgctgacattgagctcaggcgcaaaacgccccacgttgccacccgcactcagtaccatcacgcctgctttcgccccttcctgagata > 2:2396795‑M1/1‑151 (MQ=255)
ccTTTCGATACGCGCCGAAAGCGTGGCTTCATTGGCGGGAAGCGACGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCCGAGACATCTGATCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAAgtgttcgcaagcagctgcaaagcgatccagtccggtcgtcaccccttcttcgcttacatttagcgcaggcgcaaaacgcaccacgttgccacccgccatcacgaccaccccgcctgctttccccgcttccttagcga > 2:2252672‑M1/1‑146 (MQ=255)
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GTCCGGGTCGAGAAACAGCGTGCACAGCTCGCTGCTGCCGGTGTGATCGTTACTGAGAAACAGCGTCGGCAATGCGTTATAGACATTCAGCTCTTTACTGGCGTGAACCAACGTGCCGACGCGATAGTTGTACCAGGGATCGTTCA‑GCCCAACCGCCACCTCAATGGCACAAATCCCCGCCACGGTGCCTGTCTCGCTATCTTCCAGCACGAACACATAGCCCTGCTCACTTTTGGGCAGTTCGCCTTGCCAGGTTTTGATTGCCCTTTCGATACGCGCGCTAAGCGTGGCTTCATTGGCGGGAAGGCTCGTCAGGCCGCCGCCCGTTTTGCTGGCAAGCTGCATCAGCGCGCTGACATCACTTCGCTCAACGGGACGGATGACCATCATGATGAACCTCGGCTAACAAATTATTTCAACTACTACCTCGGCTAACAAAGTGTTCGCAAGCAGCTGCAAAGCGATCCAGTCCGGTCGTCACCTCTTCTTCGCTGACATTGAGCGCAGGCGCAAAACGCACCACGTTGCCACCCGCAATCAGTACCAT > CP042583/1512368‑1512914
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
