Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,518,013 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,518,0130AT97.9% 662.4 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (113/164);  minor base G (3/3);  total (117/167)
Fisher's exact test for biased strand distribution p-value = 6.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,518,0140GC98.9% 669.6 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (116/165);  minor base A (1/2);  total (117/167)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,518,0150TA99.3% 663.9 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (117/164);  minor base G (0/2);  total (117/167)
Fisher's exact test for biased strand distribution p-value = 5.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 284 total aligned reads displayed.

CAGCGCGCGCATTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGAGTGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTAAGCCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCTATAAACCTG  >  CP042583/1517733‑1518288
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                 
cAGCGCGCGCATTGCGAAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGt                                                                                                                                                                                                                                                                             <  1:783321/289‑1 (MQ=255)
        gcATTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAAtt                                                                                                                                                                                                                                                                      <  1:1609900/288‑1 (MQ=255)
        gcATTGCGCAAAGGTTGCTGTGTGGATTTTGTTTAGAGATCACCAGTATGAGCGTCTCCGCGCGAACCGGCGGCAGCGATAAACTGCTGGCAGTTGCTGACTGGCGGCAACGGCGGCTCTTTGGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAAtt                                                                                                                                                                                                                                                                      <  2:49026/288‑1 (MQ=255)
          aTTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACTGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCt                                                                                                                                                                                                                                                                    <  1:2242833/288‑1 (MQ=255)
            tGCGCAAATGGGCCTGGGGGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGcc                                                                                                                                                                                                                                                                 <  1:1703539/289‑1 (MQ=255)
                 aaaTGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGa                                                                                                                                                                                                                                                            <  1:297927/289‑1 (MQ=255)
                     gggCCTGGTTGAGTTTTGGGTGGATATCACCAGGATGAAAGTCGCCGGGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACAt                                                                                                                                                                                                                                                         <  2:47135/286‑1 (MQ=255)
                       gCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGGGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  1:1513620/289‑1 (MQ=255)
                       gCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGACCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  1:1252592/289‑1 (MQ=255)
                        cgtgtgtgGGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGACAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  1:2484649/286‑1 (MQ=255)
                        ccTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  1:2259879/288‑1 (MQ=255)
                        ccTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  1:2729695/288‑1 (MQ=255)
                        ccTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      >  2:1053051/1‑288 (MQ=255)
                             gtgAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTc                                                                                                                                                                                                                                                 >  2:1826540/1‑288 (MQ=255)
                             gtgAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCa                                                                                                                                                                                                                                                >  1:1180296/1‑289 (MQ=255)
                                  ttttGTGTGGATAGCACCAGTATGAAAGTCGCCGGGCGCACCGGCAGCAGCTATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAgggg                                                                                                                                                                                                                                            <  2:1270087/288‑1 (MQ=255)
                                     tgtgtgGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTc                                                                                                                                                                                                                                                 >  1:2359119/1‑280 (MQ=255)
                                      gtgtgGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      >  1:248119/1‑274 (MQ=255)
                                      gtgtgGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCGCCCATGGACCTTCCCGCCCACGTGCtgtt                                                                                                                                                                                                                                       >  2:2161335/1‑288 (MQ=255)
                                           gATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      >  1:2085974/1‑269 (MQ=255)
                                            atatCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGATCTTCCCGCTCAGGGTCTGTGCCGTAt                                                                                                                                                                                                                                 >  2:2069037/1‑289 (MQ=255)
                                            atatCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTCTGACGCTCAGGCGCTCACCGAACTGACGGCAGTGATCGGCCTGCAAACTCGTGCAGCCCGTTTTAATGCTTCCATGGCCATTCCCGCTCatgcgcggttgcgt                                                                                                                                                                                                                                   >  2:2237659/1‑274 (MQ=255)
                                                      tATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCg                                                                                                                                                                                                                                                    <  2:1608773/260‑1 (MQ=255)
                                                       aTGAAAGTCGCCGAGCGCACCGGCAGCAGGGATAAACGGCTGGCAGTGGGTGACTGGCGGCAAAGCCCGCTCTTTAGGGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGaaaaa                                                                                                                                                                                                                       <  2:2029448/288‑1 (MQ=255)
                                                       aTGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGaaaaa                                                                                                                                                                                                                       <  1:2003865/288‑1 (MQ=255)
                                                        tGAAAGTCGCCGGGCGCACCGGCAGCAGAGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACg                                                                                                                                                                                                                     <  1:2685309/289‑1 (MQ=255)
                                                                gCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAAtt                                                                                                                                                                                                                                                                      >  1:941159/1‑232 (MQ=255)
                                                                gCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAg                                                                                                                                                                                                             >  2:950628/1‑289 (MQ=255)
                                                                          cgggCAGCAGGTAACAACGGCTGGCAGGGCTTGACGGGCGGCAAAGCCCGCTCTTTAGGGATGAAGAGCGGCGGGCGCTGGAGTACTCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAgatgat                                                                                                                                                                                                   <  2:1180296/287‑1 (MQ=255)
                                                                              cggcagcGTTAAACTGCTGGCAGTGGCGGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAGGACCGGCTGGCGCGTGAGTACGCCGAAGCCGCAAGCGTAACGCCGCTAACGGTCGATGATGCCATGCGTACCCGACTGGCTGCGCATGTTGACGCGCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgcg                                                                                                                                                                                                <  2:272083/286‑1 (MQ=255)
                                                                              aagcagcGATAAACTGCTGGAAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgcg                                                                                                                                                                                                <  1:961005/287‑1 (MQ=255)
                                                                                   gcGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCCCAGGGGCTGCGCCGTATTTCTGAAACACGTTCTTAAGGATAGATTATGCGCCCTtg                                                                                                                                                                                          >  2:2097972/1‑289 (MQ=255)
                                                                                      aTAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGa                                                                                                                                                                                                                                                            <  1:2508798/220‑1 (MQ=255)
                                                                                      aTAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGgag                                                                                                                                                                                                          >  2:92386/1‑270 (MQ=255)
                                                                                       tAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTc                                                                                                                                                                                                                                                 <  2:1630801/230‑1 (MQ=255)
                                                                                       tAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTgtggg                                                                                                                                                                                      >  1:909652/1‑289 (MQ=255)
                                                                                               tgGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACACCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCCCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGgttgtt                                                                                                                                                                                 >  2:340867/1‑286 (MQ=255)
                                                                                                     tGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGGTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATGGTGGGTGGTTGGTGGGAtt                                                                                                                                                                        >  1:2101855/1‑289 (MQ=255)
                                                                                                     tGGCTGACTGGCGGCAAAGCCCGCCCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCCAAATCGGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCACTGGGGGTGGTTGCTGGGAtt                                                                                                                                                                        >  1:590516/1‑289 (MQ=255)
                                                                                                      ggCTGACTGGCGGCAAAGCCCGCTCTTTAGCTATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGa                                                                                                                                                                          <  1:2051178/286‑1 (MQ=255)
                                                                                                      ggCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCa                                                                                                                                                                                                                                                <  2:1924502/216‑1 (MQ=255)
                                                                                                      ggCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAgatg                                                                                                                                                                                                     <  1:1681805/259‑1 (MQ=255)
                                                                                                           aCTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGatgatg                                                                                                                                                                                                  <  1:121816/257‑1 (MQ=255)
                                                                                                           aCTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGatgatg                                                                                                                                                                                                  >  2:121816/1‑257 (MQ=255)
                                                                                                           aCTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGa                                                                                                                                                                          <  1:2149721/281‑1 (MQ=255)
                                                                                                           aCTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTatc                                                                                                                                                                  >  1:18655/1‑287 (MQ=255)
                                                                                                            cTGGCGGCCAGGCCCGCTGTTGAGCGATGAAGAACGGCGTGTGCTGGGGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTatc                                                                                                                                                                  <  2:570722/288‑3 (MQ=255)
                                                                                                               gcggcAAAGCCCGGTCTTAGGCGATGAAGGACGGCTGGCGGTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTatcgct                                                                                                                                                               <  2:1898640/288‑6 (MQ=255)
                                                                                                                     aaGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGGTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGCAACACGTTCTTACGGAGAGATGATACGCCATTGTGGGTGGTTGCTGGGATTGTTatcgctctgtctt                                                                                                                                                        >  2:2149721/1‑277 (MQ=255)
                                                                                                                              ttttGGCGAGGAAGGGCGGCTGGCGCGGGGTGCCGCCGAAGCCGCACGCGTAACGCCGCCAGCGGTCGATGATGCCCTGCGTACCCGGCTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCAGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTGTTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAac                                                                                                                                                <  2:2203258/287‑1 (MQ=255)
                                                                                                                               tttAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAacac                                                                                                                                              <  1:1053051/289‑1 (MQ=255)
                                                                                                                                 tAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCCCACCGAACTGACGGCAGTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGATAAACGTTCTGAAGGAGAGATAATGCGCCACTGTGGTTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACAt                                                                                                                                            >  2:1482090/1‑289 (MQ=255)
                                                                                                                                       tGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCa                                                                                                                                                                                             <  2:1667115/234‑1 (MQ=255)
                                                                                                                                       tGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCa                                                                                                                                                  >  2:914430/1‑277 (MQ=255)
                                                                                                                                       tGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGGGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATTCCTGTTTTCTCTGGCAACACACGCCatt                                                                                                                                      >  2:1547490/1‑287 (MQ=255)
                                                                                                                                         aagaaCGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      >  1:1043264/1‑175 (MQ=255)
                                                                                                                                         aagaaCGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTcc                                                                                                                                                                                                                                                      <  2:1043264/175‑1 (MQ=255)
                                                                                                                                         aagaaCGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTgtggg                                                                                                                                                                                      >  2:2374926/1‑239 (MQ=255)
                                                                                                                                                 cTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgcg                                                                                                                                                                                                >  1:723251/1‑221 (MQ=255)
                                                                                                                                                 cTGGCGCGGGAGTACCCCGAAGCCGCGAGAGTGACGCGGCCCACGGTCGATGAGGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCATGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCaa                                                                                                                             <  2:241546/288‑1 (MQ=255)
                                                                                                                                                   ggCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAacc                                                                                                                                               >  2:1323134/1‑267 (MQ=255)
                                                                                                                                                              aCGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATg                                                                                                                <  2:2647121/288‑1 (MQ=255)
                                                                                                                                                               cGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgc                                                                                                                                                                                                 <  1:2205986/206‑1 (MQ=255)
                                                                                                                                                               cGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAg                                                                                                              >  2:1091822/1‑289 (MQ=255)
                                                                                                                                                                  cgagtccacAAGCGTAACGCCGCCAACGGTCGCTGATGCCCTGCGTACCCGACTGGGTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCGCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGcc                                                                                                           <  2:2481919/281‑1 (MQ=255)
                                                                                                                                                                    aaGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgcg                                                                                                                                                                                                >  2:2566762/1‑202 (MQ=255)
                                                                                                                                                                    aaGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgcg                                                                                                                                                                                                <  1:2566762/202‑1 (MQ=255)
                                                                                                                                                                          cAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCaa                                                                                                         <  1:2410248/283‑1 (MQ=255)
                                                                                                                                                                           aaGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCa                                                                                                   <  1:2633269/288‑1 (MQ=255)
                                                                                                                                                                                         cAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTa                                                                                     >  1:1792240/1‑288 (MQ=255)
                                                                                                                                                                                           aCGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACg                                                                                  <  1:2167998/289‑1 (MQ=255)
                                                                                                                                                                                             ggTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGcc                                                                                <  2:723194/289‑1 (MQ=255)
                                                                                                                                                                                                cGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTgg                                                                             <  1:1917307/289‑1 (MQ=255)
                                                                                                                                                                                                 gatgatGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTggg                                                                            >  1:989259/1‑289 (MQ=255)
                                                                                                                                                                                                         ccTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACg                                                                                                                                                                                                                     <  1:1259628/144‑1 (MQ=255)
                                                                                                                                                                                                          ccgCGTACCCGACTGGCTCTCCATTTTGACGCTCAGGCTCTCACCGAACTTACCGCATTGATCGGCCTGCAAAATCTGGCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATa                                                                   <  2:1782804/287‑1 (MQ=255)
                                                                                                                                                                                                           tGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCGGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATAc                                                                  <  2:1435259/289‑1 (MQ=255)
                                                                                                                                                                                                           tGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGcc                                                                                                           >  2:1240161/1‑248 (MQ=255)
                                                                                                                                                                                                             cGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATAcc                                                                 >  1:834769/1‑288 (MQ=255)
                                                                                                                                                                                                              gTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCg                                                                <  1:2292919/288‑1 (MQ=255)
                                                                                                                                                                                                                aCCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATgc                                                                                                                                                                                                 <  2:1705029/157‑1 (MQ=255)
                                                                                                                                                                                                                 cccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCaa                                                                                                         >  2:1794002/1‑244 (MQ=255)
                                                                                                                                                                                                                  ccGACTGGTTGCGGATTTTGAGGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAAtt                                                           <  2:2353420/289‑1 (MQ=255)
                                                                                                                                                                                                                  ccGACTGGCTTCGCATTTTGACGCCCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAAtt                                                           <  2:440959/289‑1 (MQ=255)
                                                                                                                                                                                                                  ccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAAtt                                                           >  2:1354794/1‑289 (MQ=255)
                                                                                                                                                                                                                  ccGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAAtt                                                           <  1:1091822/289‑1 (MQ=255)
                                                                                                                                                                                                                      cTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAAcc                                                       <  1:1585835/289‑1 (MQ=255)
                                                                                                                                                                                                                         gCTGCGCATTTTGACGCTCAGGCGCTCACCGACCTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGCTCTTAAGTAGAGATGATGCGCCATTGTGGGTGGGTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATAAAAATTACGGCCAAAGAGCAAACCCACTGTCTTACCGACTGCGGAGGCGATACCGAACTTAACTGCt                                                    >  2:2583486/1‑289 (MQ=255)
                                                                                                                                                                                                                            gcgcATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTgg                                                                                                                                                    >  2:244593/1‑190 (MQ=255)
                                                                                                                                                                                                                                                    aCCGAACTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGa                         >  1:2436516/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        aaCTGACGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCAGGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGaaca                      >  1:165615/1‑286 (MQ=255)
                                                                                                                                                                                                                                                              cGGCATTGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTa               <  1:366372/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                   ttGATCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCta          <  2:834769/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     gATCGGCCTGCAAAGTCGTTATGCCCGTTTTAATTCGGCCATGGACATGCCCGCGCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAATGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCtata        <  2:504216/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       tCGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGa                                                                     >  1:1323338/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                        cGGCCTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCTATAAAc     <  1:1770297/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTa                                                   <  2:2692357/240‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTa               <  2:1116913/276‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGAGTAAAACCCATTACGCCATAAAccat  >  2:251573/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                               cAAAATCTGTCAGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTATCGCTGTTTTCTCTGGCAaca                                                                                                                                               >  1:489263/1‑144 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                 
CAGCGCGCGCATTGCGCAAATGTGCCTGTGTGAGTTTTGTGTGGATATCACCAGTATGAAAGTCGCCGAGCGCACCGGCAGCAGCGATAAACTGCTGGCAGTGGCTGACTGGCGGCAAAGCCCGCTCTTTAGCGATGAAGAACGGCTGGCGCTGGAGTACGCCGAAGCCGCAAGCGTAACGCCGCCAACGGTCGATGATGCCCTGCGTACCCGACTGGCTGCGCATTTTGACGCTCAGGCGCTCACCGAACTGACGGCATTGATCGGCCTGCAAAATCTGAGTGCCCGTTTTAATTCTGCCATGGACATTCCCGCTCAGGGGCTGTGCCGTATTCCTGAAAAACGTTCTTAAGGAGAGATGATGCGCCATTGTGGGTGGTTGCTGGGATTGTTAAGCCTGTTTTCTCTGGCAACACATGCCAGTGACTGGCAAGAAATTAAAAATGAGGCCAAAGGGCAAACCGTCTGGTTTAACGCCTGGGGCGGCGATACCGCAATTAACCGCTATCTCGACTGGGTGAGCGGCGAGATGAAAACCCATTACGCTATAAACCTG  >  CP042583/1517733‑1518288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A