Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,522,430 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,522,4300AT99.7% 719.2 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (150/152);  total (152/152)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,522,4310GC99.3% 709.7 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (150/150);  total (152/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,522,4320CG99.7% 714.7 / NA 304intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (151/152);  total (152/152)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 304 total aligned reads displayed.

CACGGTCATTCTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCAAGCCTG‑‑GTGAGCATTC‑GTAGCTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACAGCACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTG  >  CP042583/1522159‑1522711
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                       
cacGGTCATTCTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGGTGCATCGCCCGGATGCAACGCTG‑‑GTGAGCATTC‑GTTTGTGGCCAGAATTTATc                                                                                                                                                                                                                                                                          >  2:2010313/1‑289 (MQ=255)
          cTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCa                                                                                                                                                                                                                                                                >  1:2002883/1‑289 (MQ=255)
          aggTATGGGCGTGACGGTTACGCTGCGGGGCGTGTGGGGCAGATTATGCTTTATGCTGGCGTGACAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCa                                                                                                                                                                                                                                                                <  2:2036743/287‑1 (MQ=255)
             tATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGt                                                                                                                                                                                                                                                                       <  1:1231445/279‑1 (MQ=255)
               tGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGTACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCCCTG‑‑GTGAGCATTC‑GTTCGTGGCCACAATTTATCGGTCCGACCAGCGGt                                                                                                                                                                                                                                                           >  2:1526600/1‑289 (MQ=255)
               tGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGt                                                                                                                                                                                                                                                           >  1:1832253/1‑289 (MQ=255)
               tGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGt                                                                                                                                                                                                                                                           >  1:2310912/1‑289 (MQ=255)
               ggggTGTTACGTATAGGGTGAGGGGCGTGTGGCGCAGAGTATGCGTGATGCTGGCGTGAAAGATGTGCGGCTGCTGGATGGCGGCTGGAAAAACTGGTCAGACGCGGGACGGCCTGTTGAGAGAGGAACGCTACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGTCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGt                                                                                                                                                                                                                                                           <  2:2459467/288‑1 (MQ=255)
                gggCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGtt                                                                                                                                                                                                                                                          <  1:819572/289‑1 (MQ=255)
                  tagggacgtcagcGCTGCGGCGCGGGTGGTGCGGATGATTCTTTATGCTGGCGTGAAAGATGTGCGCTTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGGGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTa                                                                                                                                                                                                                                                         <  2:66058/276‑1 (MQ=255)
                  gCGTGTCGTATACGCTGCAGCGCGTGTGGCGCAGATGATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTa                                                                                                                                                                                                                                                         <  1:1539082/288‑1 (MQ=255)
                     tGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAg                                                                                                                                                                                                                                                      >  2:185159/1‑288 (MQ=255)
                     tGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGACGCATGGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAACTTAACGGTACGACCAGCGGTTACCGc                                                                                                                                                                                                                                                     >  2:2062505/1‑289 (MQ=255)
                     tGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGAAGAGGGACTGCCTGTTGAGCGCGGAACGCAACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCCCGATATGGAACAGTCCCGTGGACTGCTGCATAGCCAGGATGCAACGCTG‑‑GGGAGCATTCGGTCGC‑GGCCAGTATTTAGCGGTACGCACAACGGGTACAg                                                                                                                                                                                                                                                      >  2:1120298/1‑288 (MQ=255)
                       aCGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCta                                                                                                                                                                                                                                                   >  1:1608780/1‑289 (MQ=255)
                              cGCTGCCGGGCGGGTGGCGAAGATTATGCATTATGCTGGGGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGAACTGCCTGTTGAGCGCGGAACGCCACCGAAAGGGCAAGCGGACCCGGATTTCGGCCTGAAGCCCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGGCCAGCGGTTACAg                                                                                                                                                                                                                                                      <  2:945563/279‑1 (MQ=255)
                                 tGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTCTTGGTACGACCAGCGGTTACAGCTATATTAAACCa                                                                                                                                                                                                                                         >  1:2049345/1‑289 (MQ=255)
                                   cAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGTGAGCATTC‑GTTCGTGGCCAGAATTTa                                                                                                                                                                                                                                                                            <  2:1964649/254‑1 (MQ=255)
                                   cAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAg                                                                                                                                                                                                                                                               <  1:345301/265‑1 (MQ=255)
                                   cAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACCGCTATATTAAACCaaa                                                                                                                                                                                                                                       >  1:436285/1‑289 (MQ=255)
                                    aGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCaaaa                                                                                                                                                                                                                                      >  1:2388315/1‑289 (MQ=255)
                                    aGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCaaaa                                                                                                                                                                                                                                      >  1:1028922/1‑289 (MQ=255)
                                      cgcgTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAgg                                                                                                                                                                                                                                    >  2:1355940/1‑289 (MQ=255)
                                                 cAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGCTTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGGCCAGCGGTTACAGCCATATTAAACCAAAAGGGGaaagaagcg                                                                                                                                                                                                                         >  2:874955/1‑283 (MQ=255)
                                                     ttatgctttaatctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAGCCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGgcg                                                                                                                                                                                                                      <  2:1063159/288‑1 (MQ=255)
                                                      tatgctgtatggtGGCGGGGAAGATGTGCGCCTGCTGGAGGGCCGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCa                                                                                                                                                                                                                    <  2:1582013/289‑1 (MQ=255)
                                                           tttatgctGGCGTGAAAGAGGTGCGCCTGCTGGATGGCGGCTGGCAAACCGGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTg                                                                                                                                                                                                               <  1:1694457/289‑1 (MQ=255)
                                                             tatgctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGtt                                                                                                                                                                                                                                                          >  1:2073423/1‑244 (MQ=255)
                                                              atgctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACGACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTTCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAg                                                                                                                                                                                                                                                      >  1:477338/1‑247 (MQ=255)
                                                              atgctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCa                                                                                                                                                                                                                                                                <  2:2683545/237‑1 (MQ=255)
                                                              atgctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGACATAGCCGGCGCACGTTgggg                                                                                                                                                                                                            >  1:1784211/1‑289 (MQ=255)
                                                              atgctGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATa                                                                                                                                                                                                                             >  1:712582/1‑272 (MQ=255)
                                                                 ctGGCGGGAAAGAGGTGCGCCTGCTGGAGTGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGGGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGa                                                                                                                                                                                                           <  2:738016/287‑1 (MQ=255)
                                                                    gCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAAttt                                                                                                                                                                                                                                                                             <  1:1098498/218‑1 (MQ=255)
                                                                    gCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAAttt                                                                                                                                                                                                                                                                             <  1:2063981/218‑1 (MQ=255)
                                                                    gCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGt                                                                                                                                                                                                                 >  2:1820108/1‑278 (MQ=255)
                                                                    gCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGc                                                                                                                                                                                                      >  1:391200/1‑289 (MQ=255)
                                                                     cGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCa                                                                                                                                                                                                                    >  1:2175689/1‑274 (MQ=255)
                                                                     cGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCa                                                                                                                                                                                                                    <  2:2175689/274‑1 (MQ=255)
                                                                           aGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGAGGCGGGACTGCCTGTTGGGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCTGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGGTATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGc                                                                                                                                                                                               <  2:456661/289‑1 (MQ=255)
                                                                              tgtgCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGTACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGa                                                                                                                                                                                             <  1:1526600/288‑1 (MQ=255)
                                                                              tgtgCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTT‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGtt                                                                                                                                                                                                                                                          >  1:2135294/1‑227 (MQ=255)
                                                                              tgtgCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCCCCCGCCGGGGACACGCTCGCAGCGa                                                                                                                                                                                             >  1:915933/1‑288 (MQ=255)
                                                                                            aTGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATgg                                                                                                                                                                               <  1:726751/288‑1 (MQ=255)
                                                                                                               gTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGgcgc                                                                                                                                                                                                                     >  1:952893/1‑231 (MQ=255)
                                                                                                                tCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAg                                                                                                                                                                                                                                                      <  1:2600421/197‑1 (MQ=255)
                                                                                                                    aCGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTGATAACCCGGATGGCa                                                                                                                                                       >  1:1936354/1‑288 (MQ=255)
                                                                                                                      gggggACTGCCGGTTGGGGGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCAcc                                                                                                                                                     <  2:401427/286‑1 (MQ=255)
                                                                                                                         ggACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATgc                                                                                                                                                 >  1:601443/1‑289 (MQ=255)
                                                                                                                           aCTGCCTGTTGGGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATgcg                                                                                                                                                <  1:1417741/288‑1 (MQ=255)
                                                                                                                                cTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAgcg                                                                                                                                           <  2:719898/288‑1 (MQ=255)
                                                                                                                                    agcaagggagaCGCCACCAAAGGGGAAGGCGAACCCGGATTTCGGCGGGAAGATCCCGGCACACCCGCAGTTGATGATCGTTATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCgat                                                                                                                                      <  2:2313454/279‑1 (MQ=255)
                                                                                                                                       gcgcGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATCTTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACCCGCTGGTAGCGACTCGACGCAACTGGACGATTTTCATAACCCGGAGTGCACCCTGCGCAGCCCCgatgat                                                                                                                                   >  2:60234/1‑289 (MQ=255)
                                                                                                                                       gcgcGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAg                                                                                                                                                                                                <  1:1204589/228‑1 (MQ=255)
                                                                                                                                         gcgGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGatat                                                                                                                                 >  1:2442225/1‑289 (MQ=255)
                                                                                                                                            agaCGCCACCGAAAGTGAAAGCGGAACGGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTa                                                                                                                               <  2:1461128/286‑1 (MQ=255)
                                                                                                                                                  cACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCAcc                                                                                                                                                     >  2:473111/1‑260 (MQ=255)
                                                                                                                                                               aGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAAc                                                                                                                                                                 >  1:763723/1‑235 (MQ=255)
                                                                                                                                                               aGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTgg                                                                                                           <  2:1612735/289‑1 (MQ=255)
                                                                                                                                                                   gAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCgat                                                                                                                                      <  2:2157372/258‑1 (MQ=255)
                                                                                                                                                                              cGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGgcg                                                                                                                                                                                                                      <  2:796961/167‑1 (MQ=255)
                                                                                                                                                                                             ggCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGCAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTgg                                                                                                           >  2:316642/1‑259 (MQ=255)
                                                                                                                                                                                               cacaACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGc                                                                                                                                                                                                                           <  2:2302561/145‑1 (MQ=255)
                                                                                                                                                                                               cacaACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAg                                                                                                                                             >  2:1767970/1‑223 (MQ=255)
                                                                                                                                                                                                  aaCCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTCTGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAagtttcattcatct                                                                         >  2:1154868/1‑278 (MQ=255)
                                                                                                                                                                                                  aaCCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACt                                                                         >  1:650902/1‑288 (MQ=255)
                                                                                                                                                                                                  aaCCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTAACGCCATGTGGAAAGCGTGGAATATCCAACCAGAgcagcacatttcattctact                                                                         >  2:1895786/1‑274 (MQ=255)
                                                                                                                                                                                                              tGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGActcga                                                                                                                                                                                        >  1:508433/1‑161 (MQ=255)
                                                                                                                                                                                                              tGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGc                                                                                                                           <  1:2682603/226‑1 (MQ=255)
                                                                                                                                                                                                                  cGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCgg                                                                                                                                                             <  1:1761730/188‑1 (MQ=255)
                                                                                                                                                                                                                    atatGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCt                                                                                                                                                                                                     <  2:648177/146‑1 (MQ=255)
                                                                                                                                                                                                                          aaCAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCg                                                 <  2:2341511/288‑1 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCg                                                                                                              <  2:1307182/222‑1 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCg                                                                                                              >  1:1307182/1‑222 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGagcagc                                                                                        >  1:2551977/1‑244 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGagcagc                                                                                        >  1:383803/1‑244 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGagcagc                                                                                        <  2:2551977/244‑1 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAag                                                                                     >  1:2018073/1‑247 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAGACCt                                           >  1:1466627/1‑289 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                           >  1:965535/1‑289 (MQ=255)
                                                                                                                                                                                                                               gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTCCGGCACCGGCTGGCGCGCGTCCGAAAcc                                            >  2:2623181/1‑288 (MQ=255)
                                                                                                                                                                                                                                cccGTGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                           <  2:1224885/288‑1 (MQ=255)
                                                                                                                                                                                                                                    tGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATg                                      >  1:1172831/1‑289 (MQ=255)
                                                                                                                                                                                                                                    tGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATg                                      >  1:552233/1‑289 (MQ=255)
                                                                                                                                                                                                                                    tGGACTGCTGCATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGGTTCATTTTACTGCGGCCCCGGCTGGGACGGCTCCGAAACCTTTAtt                                      >  2:1637490/1‑288 (MQ=255)
                                                                                                                                                                                                                                         tgctgcATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGc                                                                                                                           <  2:366301/199‑1 (MQ=255)
                                                                                                                                                                                                                                          gctgcATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgca                                <  1:309668/289‑1 (MQ=255)
                                                                                                                                                                                                                                           ctgcATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGt                                                                                                                                                                                                                                                           <  1:2274848/69‑1 (MQ=255)
                                                                                                                                                                                                                                           ctgcATCGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                               >  1:242923/1‑289 (MQ=255)
                                                                                                                                                                                                                                             gcATCGCCAGGAGGCATCGGTG‑‑GGGAGCATTC‑GTTCGTGGCGAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAGAGAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGAAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAAGATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcacg                              <  2:915933/288‑1 (MQ=255)
                                                                                                                                                                                                                                                tCGCCAGGATGCATTGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAagtttca                                                                                <  1:883258/235‑4 (MQ=255)
                                                                                                                                                                                                                                                 cGCCAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCa                         <  2:586920/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  tcgaGGATGGATGGCTG‑‑GTGCGGATGC‑GTTGGTGGCTAGAATTTATCGGTACCAACGGCGGTTACAGCTATATGAAGCCAAGAGGTGAAATAGCCGGGGCACGTTGGGGCAACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTTTGTACGCACGCGCCa                         <  2:152117/285‑1 (MQ=255)
                                                                                                                                                                                                                                                   ccAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCCAGTTTCATTCTACTGCGGCACCGGCTGGCTCGCGGCCGAAACCTTTATGTACGCACGCGCCCTg                       >  2:209544/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   ccAGGATGCATCGCTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATg                       >  1:165578/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            atcgcTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAatat                                                                                                      <  1:1859321/197‑1 (MQ=255)
                                                                                                                                                                                                                                                             tcgcTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGgaaga             <  1:1365258/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                cTG‑‑GTGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAg                                                                                                                                                                                                                                     >  1:2523419/1‑70 (MQ=255)
                                                                                                                                                                                                                                                                      tGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt       <  2:1194510/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tGAGCATTC‑GTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACTCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGttt       <  2:1699728/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                       
CACGGTCATTCTGTATGGGCGTGACGTATACGCTGCAGCGCGTGTGGCGCAGATTATGCTTTATGCTGGCGTGAAAGATGTGCGCCTGCTGGATGGCGGCTGGCAAACCTGGTCCGACGCGGGACTGCCTGTTGAGCGCGGAACGCCACCGAAAGTGAAAGCGGAACCGGATTTCGGCGTGAAGATCCCGGCACAACCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCAAGCCTG‑‑GTGAGCATTC‑GTAGCTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGACAGCACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTG  >  CP042583/1522159‑1522711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A