Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,532,231 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,532,2310AT99.0% 729.3 / NA 310intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (157/148);  minor base G (2/1);  total (160/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,532,2320GC99.4% 724.9 / NA 310intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (160/148);  total (160/150)
Fisher's exact test for biased strand distribution p-value = 2.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,532,2330CG99.7% 730.0 / NA 310intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (159/149);  total (160/150)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 310 total aligned reads displayed.

GCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTAAGCATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATAGCATTGGTGTTCATACTGATGGTGTCAGTACTAGTCCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATAGCACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCA  >  CP042583/1531952‑1532512
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
  acaAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGgtgt                                                                                                                                                                                                                                                                                 <  2:114642/288‑1 (MQ=255)
  aaaaaTCCGCGACGCCCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGtt                                                                                                                                                                                                                                                                                <  1:1185999/287‑1 (MQ=255)
    aaaTCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCa                                                                                                                                                                                                                                                                              <  1:48067/289‑1 (MQ=255)
               ggtggcggtgagcggAAAGGGAAAGCGTTTGTCCGGCGGGTTAATAGCCCGGGCGGCAGCGTTACCGTGTCTGAGGTGATTCGCGCTGAACGGGCGGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGgt                                                                                                                                                                                                                                                                    <  2:2043231/274‑1 (MQ=255)
                             gAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTctcaacttcacc                                                                                                                                                                                                                                                      >  2:2256917/1‑277 (MQ=255)
                                        cGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGt                                                                                                                                                                                                                                          >  1:733352/1‑289 (MQ=255)
                                            tGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCt                                                                                                                                                                                                                                      <  1:542332/289‑1 (MQ=255)
                                            tGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGGTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATGCGATTGGTGTTCATACTGATGGTGTCTCACCTTAACCGCTGGCGGATGTTTCt                                                                                                                                                                                                                                      >  2:1463912/1‑289 (MQ=255)
                                                        tAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGc                                                                                                                                                                                                                           >  2:106924/1‑288 (MQ=255)
                                                        tAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGc                                                                                                                                                                                                                           >  1:527526/1‑288 (MQ=255)
                                                        tAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCa                                                                                                                                                                                                                          <  1:652102/289‑1 (MQ=255)
                                                             gCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTgcc                                                                                                                                                                                                                     >  1:1405905/1‑289 (MQ=255)
                                                                 aGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGtt                                                                                                                                                                                                                                                                                <  2:2602121/226‑1 (MQ=255)
                                                                  ggcggcAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGgtg                                                                                                                                                                                                                                                                                  <  1:223461/223‑1 (MQ=255)
                                                                  ggcggcAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCgg                                                                                                                                                                                                                                              <  2:2143895/259‑1 (MQ=255)
                                                                   gcggcAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCCTCTGGTGGTTCCTGGATTTCCACGCGATTTAATTACATGTTGGCTACCCCCAACCCCCTGCCCGTTCCTTTCGGTCTCTTCGGCGTGCTCACAACGTAAGAAACTATTTTGG‑ATTCCATTGTTTTTCATACGTTTGCTGTCTCAACTCCCCCGCTGCCGGCTGTTTCTATCACAAGGCCACGCCGGCCGGa                                                                                                                                                                                                               >  2:1576275/1‑289 (MQ=255)
                                                                        aGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAgcgc                                                                                                                                                                                                          >  1:2291468/1‑289 (MQ=255)
                                                                        aGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAgcg                                                                                                                                                                                                           >  2:2187380/1‑288 (MQ=255)
                                                                           gTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCa                                                                                                                                                                                                         <  1:1907094/287‑1 (MQ=255)
                                                                                 gcgTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCtgatga                                                                                                                                                                                                 <  1:2077244/289‑1 (MQ=255)
                                                                                 gcgTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCtgatga                                                                                                                                                                                                 <  1:765267/289‑1 (MQ=255)
                                                                                      tGAAGTGATTCGCGCTGAACTGGCATCAGCCCGGGCAGCGGGTAAGCCTGCGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGCTACTGGACTCCCACGCCAGCTAATTACATTGTGGCTAACCCCCGCACCCTTATCGGTTCTATCGGTATCTTCTGCGTGAACACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTTTTCATACTCATGGTGTCTCCACTTCACCGCTGGCGGATGGTTCTATCCTCAGTGCACTGCCGCCGGAAGCGCAGCCGCTGACGCAg                                                                                                                                                                                            >  2:2371709/1‑289 (MQ=255)
                                                                                         aGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGtt                                                                                                                                                                                          <  2:704318/288‑1 (MQ=255)
                                                                                         aGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGtt                                                                                                                                                                                          <  1:1295615/288‑1 (MQ=255)
                                                                                             aTTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCGGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATGCGATTGGTGTTCATACTGATGGTGTATCAACTTCACTGCTGGCGGATGTTTCTATCACAAGTGCACTGCGGCTGGAAGCGGTGCTGGTGATGCAGTTAAGCa                                                                                                                                                                                     >  2:1638857/1‑289 (MQ=255)
                                                                                             aTTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCa                                                                                                                                                                                     >  1:445088/1‑289 (MQ=255)
                                                                                               tCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGGCGAGGATTCAGTTAAGCAtt                                                                                                                                                                                   >  2:560819/1‑289 (MQ=255)
                                                                                                                 agcCCGGGCAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATgg                                                                                                                                                                           <  1:1617110/279‑1 (MQ=255)
                                                                                                                         cAGCGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGTCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCa                                                                                                                                                          <  1:1817068/288‑1 (MQ=255)
                                                                                                                            cGGGTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACt                                                                                                                                                                                                                        >  1:926233/1‑223 (MQ=255)
                                                                                                                             gggTCAGCCTGTGGGTGTTTCGATGGGCGGGAAGGCGGGATCTGGTGGTTCATGGATTTCCACGACAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACg                                                                                                                                                        <  2:2362138/286‑1 (MQ=255)
                                                                                                                             gggTAAGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCCCGTCCGCCGGAAGCGCAGCTCATGATGCATGTAAGCATAGAGAATGGCTATAAACGCCTTATCACGccg                                                                                                                                                     >  2:280040/1‑287 (MQ=255)
                                                                                                                                  aGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCtgatga                                                                                                                                                                                                 <  2:623982/240‑1 (MQ=255)
                                                                                                                                  aGCCTGTGGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGtt                                                                                                                                                  >  1:146547/1‑287 (MQ=255)
                                                                                                                                      tgtgGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGAt                                                                                                                                            >  1:2401198/1‑289 (MQ=255)
                                                                                                                                       gtgGTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGAt                                                                                                                                            >  1:2662775/1‑288 (MQ=255)
                                                                                                                                         ggTTGTATCGATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATgc                                                                                                                                          >  1:2252121/1‑288 (MQ=255)
                                                                                                                                             gtatcgaTGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATg                                                                                                                                                                                                                                           >  1:2162511/7‑187 (MQ=255)
                                                                                                                                              tatcgaTGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCa                                                                                                                                    >  2:1277766/6‑289 (MQ=255)
                                                                                                                                              tatcgaTGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCa                                                                                                                                    >  1:994470/6‑289 (MQ=255)
                                                                                                                                                 cgaTGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCAttc                                                                                                                                 <  1:280040/287‑3 (MQ=255)
                                                                                                                                                   aTGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCAttcg                                                                                                                                >  2:1965124/1‑285 (MQ=255)
                                                                                                                                                    tGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCCGCTGATGATGCAGTTAAGCATTGAGACTGGCTATAAACGCTTTATCACGCTGGTTGCTGATGTGCGTCAttcga                                                                                                                               >  2:783654/1‑284 (MQ=255)
                                                                                                                                                        cggcatggcggcatCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGtt                                                                                                                                                                                                                                                                                <  2:426624/139‑1 (MQ=255)
                                                                                                                                                        cggcatggcggcatCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCtgatga                                                                                                                                                                                                 >  1:257497/1‑218 (MQ=255)
                                                                                                                                                                    atCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGGTTGa                                                                                                               <  1:1933570/288‑1 (MQ=255)
                                                                                                                                                                    atCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCGATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTTGTTGCTGATGcgcg                                                                                                                                       <  1:1560078/264‑1 (MQ=255)
                                                                                                                                                                               aCTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCa                                                                                                   >  1:2625836/1‑289 (MQ=255)
                                                                                                                                                                                    aTTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  2:2576110/288‑1 (MQ=255)
                                                                                                                                                                                    aTTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  1:954283/288‑1 (MQ=255)
                                                                                                                                                                                    aTTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  2:228497/288‑1 (MQ=255)
                                                                                                                                                                                    aTTTCCACGCCAGCTAATTACATGGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  2:493483/288‑1 (MQ=255)
                                                                                                                                                                                    aTTTACACGCCAGCTAATTACTTTGTTGCTAACCCCAACTCCCTGACCGGTTTTATCGGTATCTTCTGCGTGATAACCACCATAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  1:1674579/288‑1 (MQ=255)
                                                                                                                                                                                    aTTGCCCCGCCAGCTAATTACATGTTGGCTAACCCCGCAACCCTGACCGTTTCTATCGGTATCTTCTGCGTGATTACCGCCGTAGAAAATAGTCTGG‑ATGCGATTGGTGTTCATACAGATGGTGTCGCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  2:299053/288‑1 (MQ=255)
                                                                                                                                                                                           cGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCtgatga                                                                                                                                                                                                 <  1:273448/183‑1 (MQ=255)
                                                                                                                                                                                             ccAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGa                                                                                     <  1:804783/289‑1 (MQ=255)
                                                                                                                                                                                                  tcaTTACCTTTTGGCTAACCCCAGCACCATGACCGGTTCTATCGGGATCTGCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCg                                                                                  <  2:2663555/285‑1 (MQ=255)
                                                                                                                                                                                                    cttACATTGGTGCTACCCCACGTCCCCTGAACGCGTCTATCGGGATCTTCGTCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCa                                                                              <  2:2239666/288‑1 (MQ=255)
                                                                                                                                                                                                      taccgtgtgGCTAGCCCCATCACCCTTGTCGTTTCTCTCGGTATCTTCGGCGTAATCGCCACCGTAGAAACTAGTCTGGAATAG‑ATTGGTTTTCCTACTGCTGGTGTCGCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCTCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACTCTGGTTGCTGATGCGGGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCGACGTCTGGACCGGTCAgg                                                                            <  2:1708637/284‑1 (MQ=255)
                                                                                                                                                                                                           tgtgGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTTATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCGGGCTGATGTTTCTACCACCAGGGCACTGCCGCCGGAAGCGCAGCTGAAGATGCAGTTAAGCATGGAGAATGGCTATAAACGTCTTATCCTGCAGGTGGCTGATGCGCTTCATTCGACGCCGGATCAGATTGCGAAAATTGTCCAGGTACACGTCTGGATCGGCCAGGAtcac                                                                       >  2:737013/1‑286 (MQ=255)
                                                                                                                                                                                                           tgtgGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGTTCAggtcgca                                                                       >  2:1502993/1‑284 (MQ=255)
                                                                                                                                                                                                             tgGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               >  2:816390/1‑263 (MQ=255)
                                                                                                                                                                                                             tgGATAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGAATGGGGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCGGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCATTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGACTGGACCGGTCAGGATGCaag                                                                     >  1:380026/1‑288 (MQ=255)
                                                                                                                                                                                                               gCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGtt                                                                                                                                                                                          >  1:585718/1‑170 (MQ=255)
                                                                                                                                                                                                               gCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  2:2319220/261‑1 (MQ=255)
                                                                                                                                                                                                                cTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATgg                                                                                                                                                                           <  1:1431202/184‑1 (MQ=255)
                                                                                                                                                                                                                       cAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  1:288861/253‑1 (MQ=255)
                                                                                                                                                                                                                       cAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               >  1:417495/1‑253 (MQ=255)
                                                                                                                                                                                                                       cAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACggg                                                           >  1:1021029/1‑289 (MQ=255)
                                                                                                                                                                                                                         gCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               <  1:1890073/251‑1 (MQ=255)
                                                                                                                                                                                                                         gCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               >  2:1890073/1‑251 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGatgatg                                                                                                                                                                                               >  1:1522362/1‑149 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTTTAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGAGCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGa                                                   >  2:345186/1‑289 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGTGTCATTCGACGCCGGAGCAGATTGATCAAATTGCCCAGGGCCACGTCTGGCCCTGTCAGGATGCACAAGCTAACGGGTTGGCCGa                                                   >  2:405381/1‑289 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGCTTGATAAAATTGCCCAGGGCCCCGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGa                                                   >  2:2058953/1‑289 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               >  1:2341621/1‑245 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGa                                                   <  1:106924/289‑1 (MQ=255)
                                                                                                                                                                                                                               tGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGa                                                   >  1:1738870/1‑289 (MQ=255)
                                                                                                                                                                                                                                gACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGAt                                                  >  1:1720672/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCa                                                                       >  1:907685/1‑263 (MQ=255)
                                                                                                                                                                                                                                                aTCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGatgatg                                                                                                                                                                                               >  2:2084077/1‑132 (MQ=255)
                                                                                                                                                                                                                                                aTCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAg                                                                             <  2:1732000/246‑1 (MQ=255)
                                                                                                                                                                                                                                                aTCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCg                                  >  1:2013202/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aTCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCGCGGGGAGTTCg                                  >  1:2215775/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        cGTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCg                          >  1:2284235/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         gTGATCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGa                                                                                     >  2:719614/1‑229 (MQ=255)
                                                                                                                                                                                                                                                            aTCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGc                                                                                               >  2:1181264/1‑216 (MQ=255)
                                                                                                                                                                                                                                                             tCACCCCCGTAGAAAATTGTGTGG‑GTTCGATTGGTTGTCATACTGATGGGGTCTCAACTTCACCGCTGGCTGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGTGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGc                     <  2:956768/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCACCACCGTAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCg                      >  1:682432/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gtcgAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATTGTGTCTCAACTTCACCGATGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAagcag             <  1:815053/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGtt                                                                                                                                                                                          <  1:1177258/115‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATaaaa                                                                                                          <  2:2432832/195‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGGTGCTGATGCCCGTCATTCGACGCCGGAGCAGATTGATAAAATTACCCAGGGCCACGTCTGGACCGGTCCGGCTGCAAAAGCTAACGGGCCGGTCGACAGTCTGGGGGCTTGCCTTGATGCGGTTGCCCAagcagc            >  2:2734634/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      tAGAAAATAGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTA‑CACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATGTCGATGGTGCGGTCGCCCAAgcagca           >  2:899612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              aGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGa                                                                                     <  2:1406690/208‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aGTCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTg     >  2:2464013/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                tCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGt                                                                                                                                      >  1:2446147/1‑157 (MQ=255)
                                                                                                                                                                                                                                                                                tCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGtc                                              <  2:925150/245‑1 (MQ=255)
                                                                                                                                                                                                                                                                                tCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCa  >  2:1218021/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tCTGG‑ATTCGATTGGTGTTCATACTGATGGTGTCTCAACTTCACCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATTCGACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCa  >  1:1244010/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
GCACAAATCCGCGACGCTCGCCTTGACCCGAAAGTGAAAGCGATTGTCCTGCGTGTTAATAGCCCAGGCGGCAGCGTTACCGCGTCTGAAGTGATTCGCGCTGAACTGGCAGCAGCCCGGGCAGCGGGTAAGCCTGTGGTTGTAAGCATGGGCGGCATGGCGGCATCTGGTGGTTACTGGATTTCCACGCCAGCTAATTACATTGTGGCTAACCCCAGCACCCTGACCGGTTCTATCGGTATCTTCGGCGTGATCACCACCGTAGAAAATAGTCTGG‑ATAGCATTGGTGTTCATACTGATGGTGTCAGTACTAGTCCGCTGGCGGATGTTTCTATCACCAGGGCACTGCCGCCGGAAGCGCAGCTGATGATGCAGTTAAGCATTGAGAATGGCTATAAACGCTTTATCACGCTGGTTGCTGATGCGCGTCATAGCACGCCGGAGCAGATTGATAAAATTGCCCAGGGCCACGTCTGGACCGGTCAGGATGCAAAAGCTAACGGGCTGGTCGATAGTCTCGGGGATTTCGATGATGCGGTCGCCAAAGCAGCAGAGCTGGCA  >  CP042583/1531952‑1532512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A