Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,539,897 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,539,8970AT100.0% 768.5 / NA 318intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (158/160);  total (158/160)
*CP0425831,539,8980CG99.4% 757.0 / NA 318intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (157/159);  minor base T (1/1);  total (158/160)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,539,8990TA100.0% 768.2 / NA 318intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (158/160);  total (158/160)

Only 100 of 318 total aligned reads displayed.

GTGCCATACTTACCATCATGTGAGAGAAATCTTCAAAACTGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACACTCTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATGCT‑TTTCACATCGAATCGCCCACTAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCGCTATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTG  >  CP042583/1539618‑1540177
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
 tgccattgatACCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCaa                                                                                                                                                                                                                                                                                 >  1:246960/10‑289 (MQ=255)
   ccaatagtACCATCATGTGAGAGAAATCTTCAAATGCGGTGTTACCTACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               <  2:1813533/282‑1 (MQ=255)
    gattgatACCATGATGTGAGAGAAATCATCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAAAAATAATAACCGGGGATTTCGCTTCTTCGGCTTCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               <  1:139008/282‑1 (MQ=255)
    cattgatACCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTTAAAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               <  2:1973307/283‑1 (MQ=255)
    cattgatACCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               <  1:1008370/282‑1 (MQ=255)
    cattgatACCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               <  1:2219090/282‑1 (MQ=255)
     attgatACCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGc                                                                                                                                                                                                                                                                             <  1:1942802/284‑1 (MQ=255)
           aCCATCATGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCtgttg                                                                                                                                                                                                                                                                       >  1:1742835/1‑289 (MQ=255)
                catGTGAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCACTATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACa                                                                                                                                                                                                                                                                   >  1:2551618/1‑288 (MQ=255)
                  tgtgAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGc                                                                                                                                                                                                                                                                             >  1:1078239/1‑276 (MQ=255)
                  tgtgAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGc                                                                                                                                                                                                                                                                             >  2:884930/1‑276 (MQ=255)
                  tgtgAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGc                                                                                                                                                                                                                                                                             <  1:884930/276‑1 (MQ=255)
                  tgtgAGAGAAATCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATc                                                                                                                                                                                                                                                                 >  2:132241/1‑288 (MQ=255)
                          aaaTCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTAc                                                                                                                                                                                                                                                                    <  1:2318574/277‑1 (MQ=255)
                             tCTTCAAATGAGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTa                                                                                                                                                                                                                                                     >  2:2706411/1‑289 (MQ=255)
                                       aggTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               >  1:1414373/2‑253 (MQ=255)
                                         gtgtTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               >  2:2300527/1‑251 (MQ=255)
                                                   cAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATc                                                                                                                                                                                                                                                        >  1:1459595/1‑264 (MQ=255)
                                                   cAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATc                                                                                                                                                                                                                                                        <  2:1459595/264‑1 (MQ=255)
                                                      aaCCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCTCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATCATCGTAAATATGCGTTACACTCGT‑TTTcaca                                                                                                                                                                                                                           >  2:1529335/1‑289 (MQ=255)
                                                      aaCCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTTGACATCCCGATAATCGTAAATATGCGTCACCAtcgatttcaa                                                                                                                                                                                                                             >  2:2451607/1‑279 (MQ=255)
                                                            tACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGaa                                                                                                                                                                                                                      >  2:1046966/1‑288 (MQ=255)
                                                                  aaGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGccct                                                                                                                                                                                                               <  1:2386620/289‑2 (MQ=255)
                                                                        taataaCCGGGGATTTCGCTTCTGCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGccctgaagaa                                                                                                                                                                                                         <  1:1620086/289‑8 (MQ=255)
                                                                              ccGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCCCATCAAATCGCCCTTAAGAAATAACt                                                                                                                                                                                                   >  2:2056097/1‑289 (MQ=255)
                                                                                 gggATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGaa                                                                                                                                                                                                                      >  2:1927212/1‑267 (MQ=255)
                                                                                        cGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGa                                                                                                                                                                                         <  1:1927143/289‑1 (MQ=255)
                                                                                                       gTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTgg                                                                                                                                                                          >  2:1387573/1‑289 (MQ=255)
                                                                                                         cGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCa                                                                                                                                                                        <  2:2269201/289‑1 (MQ=255)
                                                                                                            tAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATa                                                                                                                                                                      <  1:309253/288‑1 (MQ=255)
                                                                                                             aaCGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               >  1:2166516/1‑183 (MQ=255)
                                                                                                                  ccATCAACATTTCTGCATACACTACGTT‑AAAATGGGTAATTGCTTATTGTTTATTTGTGGCATCGTTTTCCCAATATCTGCTATGCGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAAt                                                                                                                                                               <  2:930936/289‑1 (MQ=255)
                                                                                                                  acagctagatagcTGCATTCCAGAGGAT‑AAGATTTGCAATTGCATAATGTTTATTTGTGGCATAGTTTTCCCAATATCTGATATCTGCGAGCATGTTATGATCTGCCGCATTAATTAGTCGCTGATTATAATAACGCCTTTAATTATGCAGCGTTTGTTGTTAACTGACTCCTCAAATGCCTGTTGTACATGTCGATGTATGTAAATATGCGGCA‑GTCGCTATATCACATGGAATCGATCAGAAGAGATAGCTTCAAGCGGGAGCGGATGACGAGTGGAACAGCGGAAt                                                                                                                                                               <  2:297349/277‑1 (MQ=255)
                                                                                                                    aTCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATAc                                                                                                                                                             <  1:199935/289‑1 (MQ=255)
                                                                                                                     tCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATCATCGTAAATATGCGTCACCATCGA‑TTCCACATCGAATCGCCCTGAAGAAATAGCTTCAATCCTGACCGGATAACGATTGGCATAGCGGAATAc                                                                                                                                                             >  2:2700230/1‑288 (MQ=255)
                                                                                                                     tCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATAcc                                                                                                                                                            >  2:1200946/1‑289 (MQ=255)
                                                                                                                        aCATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTc                                                                                                                                                         <  2:495318/289‑1 (MQ=255)
                                                                                                                        aCATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTc                                                                                                                                                         <  1:1196496/289‑1 (MQ=255)
                                                                                                                              cTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATa                                                                                                                                                   >  1:208243/1‑289 (MQ=255)
                                                                                                                                   ttCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTg                                                                                                                                                >  1:1501267/1‑287 (MQ=255)
                                                                                                                                   ttCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTg                                                                                                                                                >  2:1714859/1‑287 (MQ=255)
                                                                                                                                      cATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGa                                                                                                                                                                                                                                                             <  1:2281241/176‑1 (MQ=255)
                                                                                                                                      cATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAAt                                                                                                                                                                                                                     <  2:333234/215‑1 (MQ=255)
                                                                                                                                        tACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATTTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCTAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGAAAACGATTGGCCTAGCGGAATACCGTCTGGATAGTGACttacg                                                                                                                                         >  2:2496342/1‑286 (MQ=255)
                                                                                                                                        tACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCa                                                                                                                                                                        >  1:2726177/1‑258 (MQ=255)
                                                                                                                                          cGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCga                                                                                                                                       <  1:518597/289‑1 (MQ=255)
                                                                                                                                               aaaaTGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCg                                                                                                                                                                   <  2:386103/257‑1 (MQ=255)
                                                                                                                                                 aaTGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCgattgatt                                                                                                                                 >  2:1162855/1‑289 (MQ=255)
                                                                                                                                                 aaTGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGACTGGATAGTGACTTCGCgattgaat                                                                                                                                 >  1:1277919/1‑287 (MQ=255)
                                                                                                                                                      gCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTc                                                                                                                                                         >  2:1264376/1‑260 (MQ=255)
                                                                                                                                                      gCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAg                                                                                                                            >  2:251627/1‑289 (MQ=255)
                                                                                                                                                                    tttATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTAc                                                                                                                                                                                                                                                                    >  1:1863151/1‑140 (MQ=255)
                                                                                                                                                                      tATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTgccgaa                                                                                                            <  1:132241/289‑5 (MQ=255)
                                                                                                                                                                      tATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGCAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTgccgaa                                                                                                            <  1:57015/289‑5 (MQ=255)
                                                                                                                                                                       aTTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCtg                                                                                                                                                                                                                                                                          <  1:828486/131‑1 (MQ=255)
                                                                                                                                                                       aTTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTgccgaa                                                                                                            >  1:2030210/1‑284 (MQ=255)
                                                                                                                                                                           gttgCATCGATTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGcc                                                                                                       <  1:1046738/286‑1 (MQ=255)
                                                                                                                                                                           gtgGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGcc                                                                                                       <  1:1714859/289‑1 (MQ=255)
                                                                                                                                                                            tgGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGAc                                                                                                                                                                                        >  2:1748943/1‑207 (MQ=255)
                                                                                                                                                                            tgGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCg                                                                                                      >  2:845725/1‑289 (MQ=255)
                                                                                                                                                                            tgGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCg                                                                                                      >  1:2136660/1‑289 (MQ=255)
                                                                                                                                                                              gCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTgccgaa                                                                                                            <  2:1563827/281‑5 (MQ=255)
                                                                                                                                                                              gCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCggg                                                                                                    >  2:373577/1‑289 (MQ=255)
                                                                                                                                                                               cATCGTTTTCCCACTATCTGATAGCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGATAATGTTAAGAACGCCTTTAATACTGTCGCGTTTGTTATTAACTGACTCTTCAAATGACTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGt                                                                                                   <  2:215318/289‑1 (MQ=255)
                                                                                                                                                                               cATCGTCTTCCCTATATCTGATCTCTCCGAGCATTGTCTGTTCTCACGTATTAATTAATCGCTAATTATAATAACGCCATTAATAATTTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGt                                                                                                   <  2:2172256/289‑1 (MQ=255)
                                                                                                                                                                                 tCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTAc                                                                                                 <  1:75061/289‑1 (MQ=255)
                                                                                                                                                                                 tCGTCTTCCCAATATCTGCTATCTTCGAGCATGTGCTGTTCTCCCGTAGTAATTACTCGCTAATTTTAATAACGCCTTTAATAATCTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATGTGCGTCACCATCGA‑TTTCACATCGAAGCGCCCTGAAGAAGTAGCTTAAATCGTGAACGGGTAGCGATTGGCATAGCGGAATACCGTCTGAATAGAGACTTCGCAATTGATTTTGAGGAAGTTGATTGCCGAATCGCCGGGTAc                                                                                                 <  2:1231694/289‑1 (MQ=255)
                                                                                                                                                                                   gTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAg                                                                                               <  2:1416109/289‑1 (MQ=255)
                                                                                                                                                                                      ttCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCa                                                                                                                                                                        <  1:1104213/213‑1 (MQ=255)
                                                                                                                                                                                                ctgatatctgCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCAt                                                                                  <  1:1838205/289‑1 (MQ=255)
                                                                                                                                                                                                   atatctgCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGcc                                                                                                       >  2:2378630/1‑265 (MQ=255)
                                                                                                                                                                                                        tgCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTa                                                                           >  1:2677529/1‑288 (MQ=255)
                                                                                                                                                                                                               aTGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCcgcg                                                                   <  2:2539769/289‑1 (MQ=255)
                                                                                                                                                                                                                  ttctgttctCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCTCCGGGCACAGTACCAACAATCAAAATTTTAccgccctcaat                                                                >  2:1127794/1‑283 (MQ=255)
                                                                                                                                                                                                                  ttctgttctCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCAt                                                                <  1:2619894/289‑1 (MQ=255)
                                                                                                                                                                                                                           cccGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATa                                                       <  1:251627/289‑1 (MQ=255)
                                                                                                                                                                                                                            ccGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCa                                                                                                                                                                        >  1:125245/1‑175 (MQ=255)
                                                                                                                                                                                                                            ccGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTa                                                                                                  >  1:84741/1‑245 (MQ=255)
                                                                                                                                                                                                                                 ttaattaaTCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGc                                                 <  2:1630798/289‑1 (MQ=255)
                                                                                                                                                                                                                                  taattaatCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAAt                                                                                                                                                                                                                                                                               >  2:564742/1‑67 (MQ=255)
                                                                                                                                                                                                                                        atCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGc                                                 <  1:114699/282‑1 (MQ=255)
                                                                                                                                                                                                                                         tCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAAt                                                                                                                                                               >  1:381269/1‑171 (MQ=255)
                                                                                                                                                                                                                                         tCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTAc                                                                                                 <  2:442638/233‑1 (MQ=255)
                                                                                                                                                                                                                                         tCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGc                                                 <  2:678296/281‑1 (MQ=255)
                                                                                                                                                                                                                                               aTTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTg                                    >  2:823222/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       aaCGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCcgcg                                                                   >  2:810509/1‑249 (MQ=255)
                                                                                                                                                                                                                                                         cGCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTAACGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAAc                          >  1:2408784/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          gCCTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTTATTGCCGAATCGCCGGGTAAAGTACCAACAATCATAATTTTACCGCCCCGCATTACCAGATAAGGGGCCTGTTTAACGGTCACAGCAGAAcc                         >  2:108060/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           ccTTTAATAATGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCcgcg                                                                   <  2:1666475/245‑1 (MQ=255)
                                                                                                                                                                                                                                                                   aatGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCg               <  1:1580613/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    atGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGa              >  2:258829/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                    atGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGa              >  1:1260281/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     tGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCa                                                                                                                                                                        <  1:1540550/134‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGaa             >  2:2644998/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      gTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTAc                                                                                                 >  2:2002951/1‑204 (MQ=255)
                                                                                                                                                                                                                                                                      gTCGCGTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGAGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTgccgaa                                                                                                            >  1:474976/1‑189 (MQ=255)
                                                                                                                                                                                                                                                                          cgTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCg                       >  2:2133971/1‑274 (MQ=255)
                                                                                                                                                                                                                                                                          cgTTTGTTGTTAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACaa        >  2:2272752/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               gttgttAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCCCATTACCAGATAAGGGACCGGTTTAACGGTACACGCACAACCCGTCGTTCCGAAAACAata      >  2:1886754/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                ttgttAACTGACTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATCGA‑TTTCACATCGAATCGCCCTGAAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCCGAATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTg  <  1:2596929/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
GTGCCATACTTACCATCATGTGAGAGAAATCTTCAAAACTGGTGTTACCGACAAAACCTGTACCAAAAGAAATAATAACCGGGGATTTCGCTTCTTCGGCTGCGTCGATAACGCCCATCAACATTTCTGCATTCCATACGTT‑AAAATGGGCAATTGCATAATGTTTATTTGTGGCATCGTTTTCCCAATATCTGATATCTGCGAGCATGTTCTGTTCTCCCGTATTAATTAATCGCTAATTTTAATAACGCCTTTAATAATGTCGCGTTTGTTGTTAACACTCTCTTCAAATGCCTGTTGTACATCCCGATAATCGTAAATATGCGTCACCATGCT‑TTTCACATCGAATCGCCCACTAGAAATAGCTTCAATCGTGACCGGATAACGATTGGCATAGCGGAATACCGTCTGGATAGTGACTTCGCGATTGATTTTGAGGAAATTGATTGCGCTATCGCCGGGTACAGTACCAACAATCATAATTTTACCGCCGCGCATTACCAGATAAGGTGCCTGTTTAACGGTGACCGCAGAACCCGCTGTTTCGAAAACAATATCTG  >  CP042583/1539618‑1540177

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A