Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,605,263 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,605,2630GC99.2% 549.8 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base C (124/113);  total (126/113)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,605,2640CG99.6% 555.9 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (124/113);  total (126/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01
*CP0425831,605,2650TA99.2% 549.6 / ‑5.9 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/1);  new base A (122/112);  total (126/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01

Only 100 of 239 total aligned reads displayed.

TAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACGCTAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGT  >  CP042583/1604983‑1605544
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
tAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGaa                                                                                                                                                                                                                                                                                   <  2:1457825/289‑1 (MQ=255)
     gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCGTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGCAAACGCAGAACACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCGAGGCCCTGGACATCTGTCAGCCAAAAACGAGCACAAGCGAG‑GTGCAATGGa                                                                                                                                                                                                                                                                              >  2:2672462/1‑289 (MQ=255)
     gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGa                                                                                                                                                                                                                                                                              >  2:563788/1‑289 (MQ=255)
        acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATaa                                                                                                                                                                                                                                                                           >  1:2614343/1‑289 (MQ=255)
        acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGGCAAGGGGGCCAGCCCGGCACCGTCCATTGCGAAGCCAACAACCCGCA‑CAAGCGGAGTGAAATGGATaa                                                                                                                                                                                                                                                                           >  2:569238/1‑289 (MQ=255)
           aTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATc                                                                                                                                                                                                                                                                        >  1:1200058/1‑289 (MQ=255)
                 gtgaCGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  <  1:737366/286‑1 (MQ=255)
                 gTTACGAGCGCGAGAACAATTTGCCATAACCAGATGCCACCAACATGCGTTTGCAAAACAACCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  <  2:1334655/289‑1 (MQ=255)
                  ttACGAGGGCGGGAACAATTTGCCATAACCCGAACACCCCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  <  2:1880351/288‑1 (MQ=255)
                   aaCGAGGGAGAGAAAAATTTGCCATAACCAGATGCCACCAAACAGCGTTTGAAAAACAGCCTGCCAAAAGTTTGGAGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGcgcg                                                                                                                                                                                                                                                                <  2:2273829/288‑1 (MQ=255)
                           cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCg                                                                                                                                                                                                                                                                       >  2:517989/1‑274 (MQ=255)
                           cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGt                                                                                                                                                                                                                                                        >  1:449807/1‑289 (MQ=255)
                             agaACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTaa                                                                                                                                                                                                                                                      >  1:918188/1‑289 (MQ=255)
                                     ttGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGc                                                                                                                                                                                                                                              <  2:1941712/289‑1 (MQ=255)
                                         cATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGACAGCCAGGCACCGCACATCGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCag                                                                                                                                                                                                                                            >  1:1005381/1‑286 (MQ=255)
                                            aaCCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAGAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GGGAAATGGATAAATCGCAGCGCGATCCAGGTAAACCCCAGCATGagtt                                                                                                                                                                                                                                       >  2:2071059/1‑289 (MQ=255)
                                                   tGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                                                                                                                                                                                                                   <  2:2609231/286‑1 (MQ=255)
                                                     caaccaAACGTCGTTTCCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                                                                                                                                                                                                                              <  2:1611849/287‑1 (MQ=255)
                                                     acacaaAACTGCGTTTGCAAAACAGCCTGACAAATGTTAGGCGAAGATA‑AACCTGCCCATCCCGGTCCGATCAGCCCGCCCGGAACGGCGAGCAGTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                                                                                                                                                                                                                              <  2:1584251/288‑1 (MQ=255)
                                                        ccaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGGCGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTaa                                                                                                                                                                                                                           <  2:331725/289‑1 (MQ=255)
                                                            aCTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGgt                                                                                                                                                                                                                       >  2:282251/1‑289 (MQ=255)
                                                                cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                                                                                                                                                                                                                   <  1:511575/273‑1 (MQ=255)
                                                                cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GGTAAATGGCTCAATCGCAGAGCGACCCAGGTAAACGCCAGCAGGCTTTATTTCACGCTAACGGTGTAg                                                                                                                                                                                                                   >  2:629179/1‑289 (MQ=255)
                                                                       aaaaCAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCtt                                                                                                                                                                                                            <  2:1296265/289‑1 (MQ=255)
                                                                        aaaCAGCCTGCCAAA‑GTTTTGGCGAAAAACCATCTGTCCACCCCGTTCCCACCACCCCGCCCTGAACGGCGGGCATTGCAGTGGACCTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCttt                                                                                                                                                                                                           <  2:1696529/289‑1 (MQ=255)
                                                                                              cgaaactA‑CATCTGTCCATCCCGTTCCCAGCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCAATGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCAccga                                                                                                                                                                                      <  1:2498777/282‑4 (MQ=255)
                                                                                                                aTCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAAc                                                                                                                                                                    <  1:2574483/289‑1 (MQ=255)
                                                                                                                  cccGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACg                                                                                                                                                                                                                                                   >  1:2114074/1‑208 (MQ=255)
                                                                                                                  cccGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACgg                                                                                                                                                                  >  1:1377615/1‑289 (MQ=255)
                                                                                                                    cGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTc                                                                                                                                                                       <  1:1322/282‑1 (MQ=255)
                                                                                                                      ttCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                                                                                                                                                                                                                              >  1:825363/1‑225 (MQ=255)
                                                                                                                       tCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGgt                                                                                                                                                                                                                       >  1:563778/1‑231 (MQ=255)
                                                                                                                       tCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCAcc                                                                                                                                                                                        <  1:88733/262‑2 (MQ=255)
                                                                                                                       tCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAg                                                                                                                                                             >  1:1489468/1‑289 (MQ=255)
                                                                                                                       tCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGGGTCCTTTCGTTTTATGCCCGTCCAcc                                                                                                                                                                                        >  2:88733/1‑261 (MQ=255)
                                                                                                                           aTCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGtt                                                                                                                                                          >  1:1684805/1‑288 (MQ=255)
                                                                                                                                     ccTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  <  2:748915/174‑1 (MQ=255)
                                                                                                                                     ccTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  >  1:748915/1‑174 (MQ=255)
                                                                                                                                         aaCGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACACCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAgcgaa                                                                                                                                           >  1:396134/1‑285 (MQ=255)
                                                                                                                                          aCGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAgcgaa                                                                                                                                           <  1:2071059/288‑5 (MQ=255)
                                                                                                                                              cGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAAc                                                                                                                                                                    <  1:688933/259‑1 (MQ=255)
                                                                                                                                              cGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCAAGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAgcgaatcgg                                                                                                                                       >  1:2350656/1‑280 (MQ=255)
                                                                                                                                              cGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGAGCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTCTATGCCCGTCCACCGAAACAACATGCCAGTCAACGTTTGAGGTTCCGGGTTTCAgcgaatcgg                                                                                                                                       >  2:1682538/1‑280 (MQ=255)
                                                                                                                                                   aTTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTg                                                                                                                                 <  2:918188/289‑1 (MQ=255)
                                                                                                                                                          tGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAgcgaa                                                                                                                                           >  1:287998/1‑268 (MQ=255)
                                                                                                                                                            gCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCTTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCAAGTGGaacaaaca                                                                                                                        >  2:2180345/1‑289 (MQ=255)
                                                                                                                                                            gCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCa                                                                                                                        >  1:880108/1‑289 (MQ=255)
                                                                                                                                                            gCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCa                                                                                                                        >  1:2390326/1‑289 (MQ=255)
                                                                                                                                                             cACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  >  1:1114853/1‑150 (MQ=255)
                                                                                                                                                             cACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAgcg                                                                                                                                                                                                                                                                  <  2:1114853/150‑1 (MQ=255)
                                                                                                                                                                 gATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGACACAACATGCCAGTCAACGGAGTAGGTTCCGGGTTTCAGCGAACCGGCCAGTGGAACAATCAGtt                                                                                                                     >  2:2399417/1‑287 (MQ=255)
                                                                                                                                                                 gATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGtt                                                                                                                     >  1:2722869/1‑287 (MQ=255)
                                                                                                                                                                  aTCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATc                                                                                                                         >  1:2704151/1‑282 (MQ=255)
                                                                                                                                                                  aTCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCt                                                                                                                  >  2:2536666/1‑289 (MQ=255)
                                                                                                                                                                            aGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                                                                                                                                                                                                                   >  2:1828863/1‑166 (MQ=255)
                                                                                                                                                                            aGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                                                                                                                                                                                                                   <  1:1828863/166‑1 (MQ=255)
                                                                                                                                                                            aGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCATTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTAAACGGTGTCGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTctgg                                                                                                        >  1:1442956/1‑286 (MQ=255)
                                                                                                                                                                              aCGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAAc                                                                                                                                                                    >  2:230974/1‑227 (MQ=255)
                                                                                                                                                                                  cAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGACAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAACTGGATAAATCGCAGCGCGATCACGGTAAACGCCAGCATGATTGATTTCACGCTAAAGGTGTAGTGTCTCTTCGTTTTATGCCCGTCCCCCGAAACAACATGCCAGTCAACGGTGTAGGTACCGGGTTTCAGCGAATCGGCCAGGGGCACAATCATTTTCTTTCGGTCCTGcccctt                                                                                                  >  2:1800380/1‑284 (MQ=255)
                                                                                                                                                                                   aGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                                                                                                                                                                                                                   <  1:1594094/159‑1 (MQ=255)
                                                                                                                                                                                   aGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCAccgaaaca                                                                                                                                                                                  <  2:2705179/208‑8 (MQ=255)
                                                                                                                                                                                     cGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCttt                                                                                                                                                                                                           >  1:566499/1‑181 (MQ=255)
                                                                                                                                                                                     cGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGgtg                                                                                                                                                                >  1:1510655/1‑224 (MQ=255)
                                                                                                                                                                                     cGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGgtg                                                                                                                                                                <  2:1510655/224‑1 (MQ=255)
                                                                                                                                                                                       tGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGGAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACCAGCAGTTGCTTTTGGTTCTGCACATttcgct                                                                                             >  2:1308013/1‑289 (MQ=255)
                                                                                                                                                                                          tgttgtAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATttcgcttcg                                                                                          <  1:1337696/289‑1 (MQ=255)
                                                                                                                                                                                          tgttgtAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATttcgcttc                                                                                           >  1:1923690/1‑288 (MQ=255)
                                                                                                                                                                                              gtAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGgtgt                                                                                                                                                               >  1:1846176/1‑216 (MQ=255)
                                                                                                                                                                                                aaaCGCACAAAACGCTCACGCC‑GCAGGCGACGAAACGTCAAGGGGGCCAGCCGGGCACCGGAACTTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTa                                                                                    <  2:1416769/289‑1 (MQ=255)
                                                                                                                                                                                                 aaCGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTaa                                                                                   >  1:1678752/1‑289 (MQ=255)
                                                                                                                                                                                                      aGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCa                                                                                                                                                                      >  1:997559/1‑201 (MQ=255)
                                                                                                                                                                                                      aGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCt                                                                                                         >  2:1499786/1‑262 (MQ=255)
                                                                                                                                                                                                          aaCGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAacaaca                                                                                                                                                                               >  1:1030438/1‑188 (MQ=255)
                                                                                                                                                                                                          aaCGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAacaaca                                                                                                                                                                               <  2:1030438/188‑1 (MQ=255)
                                                                                                                                                                                                                        cAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGtttttt                                                             >  1:1257471/1‑289 (MQ=255)
                                                                                                                                                                                                                             gccgaatactaaaGGGGGCCAGCCAGGCACCGTACAATGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTg                                                            <  2:731238/274‑1 (MQ=255)
                                                                                                                                                                                                                                            gggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCAccga                                                                                                                                                                                      <  1:2155823/148‑4 (MQ=255)
                                                                                                                                                                                                                                            gggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca                                           <  1:1798408/287‑1 (MQ=255)
                                                                                                                                                                                                                                             ggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCT‑AAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca                                           >  2:1177634/1‑285 (MQ=255)
                                                                                                                                                                                                                                             ggCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCT‑AAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca                                           <  1:1177634/285‑1 (MQ=255)
                                                                                                                                                                                                                                               ccagccagGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCTGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACt                                      >  2:721819/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       gCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGTCCCCGTGGTTTTTGCACCACTTAATCCtt                              >  2:555161/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       gCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAAt                                  >  1:2056297/1‑285 (MQ=255)
                                                                                                                                                                                                                                                        cACCGTACATTGCGAAGCCAAAAACCGGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATcc                                <  2:769038/286‑1 (MQ=255)
                                                                                                                                                                                                                                                        cACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGt                                                                                                                      <  2:290815/200‑1 (MQ=255)
                                                                                                                                                                                                                                                        cACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATcc                                <  2:872716/286‑1 (MQ=255)
                                                                                                                                                                                                                                                             tACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca                                           <  2:474868/270‑1 (MQ=255)
                                                                                                                                                                                                                                                             tACATTGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGca                                           >  1:474868/1‑270 (MQ=255)
                                                                                                                                                                                                                                                                  tGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACt                                      <  1:1567362/270‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tGCGAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCt                   >  2:2625681/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     gAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTcc                >  1:109164/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     gAAGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTcc                >  2:852726/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       aGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga              >  2:485035/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                       aGCCAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccga              <  1:538661/289‑4 (MQ=255)
                                                                                                                                                                                                                                                                         ccAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTa                                                                                    <  2:2144134/217‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ccAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCCCCACTTAATCCTGTTTCAAAACTTTccgaac            >  2:2515453/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                          cAAAAACCAGCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTccgag             <  1:1276031/287‑5 (MQ=255)
                                                                                                                                                                                                                                                                                   gCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCttt                                                                                                                >  2:374017/1‑179 (MQ=255)
                                                                                                                                                                                                                                                                                   gCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCttt                                                                                                                <  1:374017/179‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   gCATCAGCGAG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACCGAAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGCGAATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGt  >  1:311725/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                        
TAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCT‑TCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTG‑GTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTCCACGCTAACAACATGCCAGTCAACGGTGTAGGTTCCGGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGT  >  CP042583/1604983‑1605544

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A