Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,605,680 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,605,6800AT99.6% 554.9 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (104/126);  minor base G (1/0);  total (105/126)
Fisher's exact test for biased strand distribution p-value = 4.55e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01
*CP0425831,605,6810CG99.6% 544.0 / ‑5.4 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (105/124);  minor base A (0/1);  total (105/126)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01
*CP0425831,605,6820TA100.0% 554.3 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (105/126);  total (105/126)

Only 100 of 232 total aligned reads displayed.

GGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAAGCTAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTACTAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGTTGAACGTGAACAG  >  CP042583/1605395‑1605958
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                     
     tcagcgaaTCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGAGAAGGGAGCGTGCAGTTGAAGCCat                                                                                                                                                                                                                                                                                 >  1:2709634/8‑289 (MQ=255)
         cgaaTCGGCCAGTGGAACAATCAGTTGCTTTTGGTTCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCAtatt                                                                                                                                                                                                                                                                              <  2:396134/285‑1 (MQ=255)
             tCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATGTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTa                                                                                                                                                                                                                                                                         <  1:226622/289‑1 (MQ=255)
                           aaTCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGtaat                                                                                                                                                                                                                                                           <  1:721819/289‑1 (MQ=255)
                           aaTCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGtaat                                                                                                                                                                                                                                                           <  1:2471048/289‑1 (MQ=255)
                           aaTCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGtaat                                                                                                                                                                                                                                                           <  2:188734/289‑1 (MQ=255)
                                     ttttGGTTCTTCTCATTTCGCTTCGCCGGTTATGTTTTCATATTTTCGTTGTTTGGCCCCGTGATTTTTGCCCCACTGAATCCTGTTTCAACACCGTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTa                                                                                                                                                                                                                                                 <  2:2523639/289‑1 (MQ=255)
                                      tttGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTAc                                                                                                                                                                                                                                                <  2:329561/289‑1 (MQ=255)
                                       ttGGTCCTGCTCATTTCTCTTCGCCGGTAATGTTTTCATATTTTCGTTTATTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  2:1442956/289‑1 (MQ=255)
                                       ttGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  1:852726/289‑1 (MQ=255)
                                       ttGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  1:1832599/289‑1 (MQ=255)
                                              tGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCata                                                                                                                                                                                                                                                                                >  1:137244/1‑249 (MQ=255)
                                              tGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATa                                                                                                                                                                                                                                        >  1:2041376/1‑289 (MQ=255)
                                                cTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAAc                                                                                                                                                                                                                                      <  2:1577006/289‑1 (MQ=255)
                                                 tCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAAcc                                                                                                                                                                                                                                     <  1:478768/289‑1 (MQ=255)
                                                   aTTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  1:2243094/277‑1 (MQ=255)
                                                     ttcgcttcgcCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑Tg                                                                                                                                                                                                                                 >  2:819663/1‑288 (MQ=255)
                                                     ttcgcttcgcCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGGTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATa                                                                                                                                                                                                                                        <  2:795235/282‑1 (MQ=255)
                                                         cttcgcCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTa                                                                                                                                                                                                                                                                         >  2:2048358/1‑245 (MQ=255)
                                                             gcCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTc                                                                                                                                                                                                                        <  2:2720269/289‑1 (MQ=255)
                                                             gcCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTAGCTATTCTCTTTTGTAATAACTTTTTTACAGAGCATAACCTCTGTCttctat                                                                                                                                                                                                                         >  2:2243094/1‑284 (MQ=255)
                                                               cGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCGACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCt                                                                                                                                                                                                                       <  2:850531/288‑1 (MQ=255)
                                                                    aTGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCg                                                                                                                                                                                                                 <  1:212421/289‑1 (MQ=255)
                                                                          tAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGt                                                                                                                                                                                                                   >  1:675377/1‑281 (MQ=255)
                                                                            atatTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGatca                                                                                                                                                                                                          >  2:1835022/1‑288 (MQ=255)
                                                                                 ttCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCt‑t                                                                                                                                                                                                                                  >  1:632499/1‑259 (MQ=255)
                                                                                 ttCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAAtt                                                                                                                                                                                                    >  2:1247082/1‑289 (MQ=255)
                                                                                         ttGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTg                                                                                                                                                                                            <  1:2458956/289‑1 (MQ=255)
                                                                                              cccGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGGGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATc                                                                                                                                                                                       <  2:234475/289‑1 (MQ=255)
                                                                                              cccGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCt                                                                                                                                                                                                                       >  2:1365670/1‑257 (MQ=255)
                                                                                              cccGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATc                                                                                                                                                                                       <  1:600107/289‑1 (MQ=255)
                                                                                                                   aaTCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGtaataa                                                                                                                                                                                                                                                         <  1:1287825/203‑1 (MQ=255)
                                                                                                                   aaTCCTGTTTCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTc                                                                                                                                                                                <  2:2608332/275‑1 (MQ=255)
                                                                                                                           ttCAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCcgc                                                                                                                                                          <  1:307755/289‑1 (MQ=255)
                                                                                                                             cAACACCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGa                                                                                                                                                        <  2:2377733/289‑1 (MQ=255)
                                                                                                                                cacCTTCCGAGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCt                                                                                                                                                                                                                                    <  2:2458167/211‑1 (MQ=255)
                                                                                                                                   cttccgagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAatgatg                                                                                                                                                  >  2:415509/8‑289 (MQ=255)
                                                                                                                                   ctgccgagAAGTTTAAAGTGATTGCCTGGAGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAatgatg                                                                                                                                                  <  2:920873/282‑1 (MQ=255)
                                                                                                                                    ttccgagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCCATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAAtgatga                                                                                                                                                 >  2:1702489/7‑289 (MQ=255)
                                                                                                                                     tccgagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATgag                                                                                                                                                <  1:2672887/284‑1 (MQ=255)
                                                                                                                                     tccgagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATgag                                                                                                                                                <  1:611513/284‑1 (MQ=255)
                                                                                                                                      ccgagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  2:535381/190‑1 (MQ=255)
                                                                                                                                        gagAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATgaggag                                                                                                                                             <  2:710005/287‑1 (MQ=255)
                                                                                                                                             gTTTAAAGTGATTGCCTGCGGTGCGGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCTGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTaa                                                                                                                                        >  1:181221/1‑289 (MQ=255)
                                                                                                                                               ttAAAGTGATTGCCTGCGGTGCGGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCTGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTaa                                                                                                                                        <  2:181221/287‑1 (MQ=255)
                                                                                                                                                tAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGaa                                                                                                                                     >  2:741504/1‑289 (MQ=255)
                                                                                                                                                        ttGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACa                                                                                                                                                                                                                                               <  1:454312/176‑1 (MQ=255)
                                                                                                                                                        ttGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTaa                                                                                                                                        >  2:60422/1‑278 (MQ=255)
                                                                                                                                                        ttGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTgaag                                                                                                                             >  1:1135160/1‑289 (MQ=255)
                                                                                                                                                        ttGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTgaag                                                                                                                             >  2:2416416/1‑289 (MQ=255)
                                                                                                                                                            cTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAAt                                                                                                                          <  1:372594/288‑1 (MQ=255)
                                                                                                                                                               cGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCa                                                                                                                                                                               >  2:902376/1‑232 (MQ=255)
                                                                                                                                                                     aGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTaa                                                                                                                  >  1:667496/1‑287 (MQ=255)
                                                                                                                                                                      gCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTaa                                                                                                                  >  2:177401/1‑286 (MQ=255)
                                                                                                                                                                         gTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAat                                                                                                                                                      >  2:559066/1‑247 (MQ=255)
                                                                                                                                                                         gTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGa                                                                                                            >  1:162400/1‑289 (MQ=255)
                                                                                                                                                                            aCTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCa                                                                                                                                                                                                                                          <  2:310810/161‑1 (MQ=255)
                                                                                                                                                                              ttGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGa                                                                                                                                      >  2:2118165/1‑258 (MQ=255)
                                                                                                                                                                              ttGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa                                                                                                       <  1:177401/289‑1 (MQ=255)
                                                                                                                                                                                 cgcgTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAatgatg                                                                                                                                                  >  1:1859111/1‑243 (MQ=255)
                                                                                                                                                                                 cgcgTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAatgatg                                                                                                                                                  <  2:1859111/243‑1 (MQ=255)
                                                                                                                                                                                  gcgTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGa                                                                                                   <  2:667334/289‑1 (MQ=255)
                                                                                                                                                                                        gCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCAtatt                                                                                                                                                                                                                                                                              >  1:556185/1‑113 (MQ=255)
                                                                                                                                                                                        gCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCt                                                                                                                                                                                 <  1:2053704/205‑1 (MQ=255)
                                                                                                                                                                                                    tGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATg                                                                                  >  1:2378049/1‑288 (MQ=255)
                                                                                                                                                                                                           ttAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTa                                                                                                                                                                                                                                                 <  1:920470/123‑1 (MQ=255)
                                                                                                                                                                                                           ttAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCa                                                                                                                                                                                                                                          <  1:1202598/130‑1 (MQ=255)
                                                                                                                                                                                                           ttAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCa                                                                                                                                                                                                                                          >  2:1202598/1‑130 (MQ=255)
                                                                                                                                                                                                           ttAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTg                                                                                                                                                                                            >  1:2681509/1‑175 (MQ=255)
                                                                                                                                                                                                           ttAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTg                                                                          >  2:2311328/1‑289 (MQ=255)
                                                                                                                                                                                                                    cATGTGCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGcc                                                                 >  2:2676486/1‑289 (MQ=255)
                                                                                                                                                                                                                        tgCCCAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGa                                                                                                            >  1:311331/1‑242 (MQ=255)
                                                                                                                                                                                                                          cccAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGa                                                                                                                                                        >  2:501034/1‑196 (MQ=255)
                                                                                                                                                                                                                          cccAGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGt                                                            <  1:2296528/288‑1 (MQ=255)
                                                                                                                                                                                                                             aGACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCa                                                        >  2:159297/1‑289 (MQ=255)
                                                                                                                                                                                                                              gACGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa                                                                                                       >  2:1944497/1‑241 (MQ=255)
                                                                                                                                                                                                                               aCGGAAGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTgaagaa                                                                                                                           >  2:1382981/1‑220 (MQ=255)
                                                                                                                                                                                                                                    aGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTgg                                                                                                                      >  1:1635587/1‑220 (MQ=255)
                                                                                                                                                                                                                                    aGGTGTCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAg                                                 <  2:673970/289‑1 (MQ=255)
                                                                                                                                                                                                                                       tgtCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGaa                                               <  1:2115014/288‑1 (MQ=255)
                                                                                                                                                                                                                                       tgtCACCAACGAAGTCGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTGCAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGGTCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGaa                                               <  1:1002332/288‑1 (MQ=255)
                                                                                                                                                                                                                                         tCACCAACGAAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCAAAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAatgatg                                                                                                                                                  <  1:753504/187‑1 (MQ=255)
                                                                                                                                                                                                                                           accaacgaaGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCt                                           >  1:178849/9‑288 (MQ=255)
                                                                                                                                                                                                                                                cgaaGTGGTCAGGATTGCCCGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAAAAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTTGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGCTTAAGAATGCTGAAGAATCTGGCTAAACTGGATCATACAGAAATGGATAAAGTGAATGTCGATTTGTCGGCGGCCGGGGTGGCATTTAAATAATGCTACAgta                                     >  2:1754488/4‑289 (MQ=255)
                                                                                                                                                                                                                                                   aGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGTCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATTGATAAAGTGAATGTCTCTTTGGAGGAGGCTGGAGTGGCATTTAAAGAAAGAGACAatata                                   >  2:1674022/1‑287 (MQ=255)
                                                                                                                                                                                                                                                      ggTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCg                                <  1:2450828/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          aGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATgag                                                                                                                                                <  2:1121947/172‑1 (MQ=255)
                                                                                                                                                                                                                                                            gATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGt                              <  1:42771/284‑1 (MQ=255)
                                                                                                                                                                                                                                                               tGCCAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCcgc                                                                                                                                                          <  1:806425/157‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ccAGCGCGTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGa                                                                                                   <  1:2317461/210‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcgTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGt                                                            >  1:1715334/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                      gcgTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               >  1:1441009/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       gttacggAAGGGAGAGTGCAGTTTAGGCCATATTTTCTATTCCTTTTTGTAATAACTTTTGTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               <  2:1274096/282‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               <  1:2548252/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               <  2:452194/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cgTAGCGAAGGGAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               <  1:1656464/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 ggAGCGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGTTGAACGTGAAc    >  1:1061806/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     cGTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCaaa                                                                                                       >  2:460394/1‑186 (MQ=255)
                                                                                                                                                                                                                                                                                      gTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGt               >  2:1179931/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                                      gTGCAGTTGAAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCAGGGGTGGCATTTAAAGAACGCTACAATATGCCGGAGAACGCTGAAGCGGTTGAACGTGAAAAg  >  2:427157/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                                             |||                                                                                                                                                                                                                                                                                     
GGGTTTCAGGCTATCGGCCAGTGGAACAATCAGTTGCTTTTGGTCCTGCTCATTTCGCTTCGCCGGTAATGTTTTAATATTTTCGTTTTTTGGCCCCGTGATTTTTGCACCACTGAATCCTGTTTCAACACCTTCGCTGAAGTTTAAAGTGATTGCCTGCGGTGCAGCTGTCACTTGCGCGTTTGCCGCAGGATACTGATGCGTTAAATGCGCATGTGCCCAGACGGAAGGTGTCACCAAGCTAGTGGTCAGGATTGCCAGCGCGTAGCGAAGGGAGCGTGCAGTACTAGCCATATTATCTATTCCTTTTTGTAATAACTTTTTTACAGAGCATAACCT‑TGTCTAATGTCTGAGTCGAGGATCATCAATTCCGGCTTGCCATCCTGGCTCACTCTTAGTAACTTTTGCCCGCGAATGATGAGGAGATTAAGAATGCTGAAGAATCTGGCTAAACTGGATCAAACAGAAATGGATAAAGTGAATGTCGATTTGGCGGCGGCCGGGGTGGCATTTAAAGAACGCTACAATATGCCGGTGATCGCTGAAGCGGTTGAACGTGAACAG  >  CP042583/1605395‑1605958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A