Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,607,852 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,607,8520AT99.6% 619.7 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  new base T (119/138);  total (119/139)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,607,8530CG100.0% 620.2 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (119/139);  total (119/139)
*CP0425831,607,8540TA99.6% 617.8 / NA 258intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (118/139);  minor base G (1/0);  total (119/139)
Fisher's exact test for biased strand distribution p-value = 4.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

CGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATACTTTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGGCTAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACA  >  CP042583/1607572‑1608122
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                            
cgtacgatttAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATtcatc                                                                                                                                                                                                                                                                        <  2:1577264/282‑1 (MQ=255)
  tacgatttAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCaa                                                                                                                                                                                                                                                                      >  1:1482641/6‑289 (MQ=255)
    cgatttAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGc                                                                                                                                                                                                                                                                    <  2:38997/286‑1 (MQ=255)
       tttAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATc                                                                                                                                                                                                                                                                 >  2:1691383/1‑289 (MQ=255)
        ttAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCg                                                                                                                                                                                                                                                                <  1:136737/289‑1 (MQ=255)
         tAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCgt                                                                                                                                                                                                                                                               <  2:585899/289‑1 (MQ=255)
               gACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCgttgtt                                                                                                                                                                                                                                                           <  1:2673210/287‑1 (MQ=255)
               gACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTac                                                                                                                                                                                                                                                         >  2:524786/1‑289 (MQ=255)
               gACCAGATTTACCGCCATGGCCTGAGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTa                                                                                                                                                                                                                                                          <  1:169681/288‑1 (MQ=255)
                           cGCCATGGCCTGAGTACATGTCGGAACAGAGATATAAAAGATGGTAATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGGGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                                                                                                                                                                                                                             <  1:14177/289‑1 (MQ=255)
                               atggcctgagTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGt                                                                                                                                                                                                                                         <  1:2099158/280‑1 (MQ=255)
                                    ctgagTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTg                                                                                                                                                                                                                                    <  2:533247/285‑1 (MQ=255)
                                        gTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACCTTTCAAACTCACCAGTGGTAAGAGGAATTGATTCTTCAAGCATCCTTGTTACAACATCAACAAACGGTACCTGGGct                                                                                                                                                                                                                                >  2:2029382/1‑288 (MQ=255)
                                            aTGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCTATaa                                                                                                                                                                                                                            >  2:2621032/1‑289 (MQ=255)
                                            aTGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATaa                                                                                                                                                                                                                            >  2:1288714/1‑289 (MQ=255)
                                            aTGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAAAAAACGGTACCTGGGCGATaa                                                                                                                                                                                                                            >  1:1027445/1‑289 (MQ=255)
                                             tGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCa                                                                                                                                                                                                                                                                   <  1:2131581/249‑1 (MQ=255)
                                             tGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGGAAGAGGAATTGATTCATCAAGCa                                                                                                                                                                                                                                                                   >  2:2131581/1‑249 (MQ=255)
                                             tGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCGTTTCATGTACTCGTAATATTGCGGATCCTGCGGGGTACCCCACTCTTCAAACTCACTAGTGGTGAGAGGAATTGATTCATCAAGCATCGTCGTTACAACATCAACAAACGGTACCTgggtgcgttt                                                                                                                                                                                                                           >  1:2709114/1‑282 (MQ=255)
                                              gTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACg                                                                                                                                                                                                                                           <  2:1450420/272‑1 (MQ=255)
                                                cGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATcaa                                                                                                                                                                                                                                                 <  1:921115/264‑1 (MQ=255)
                                                  gTACAGGGCAATAAAAGATGGTCATCGGTTTTCAGGTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCg                                                                                                                                                                                                                       <  2:2360150/288‑1 (MQ=255)
                                                   tACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCg                                                                                                                                                                                                                                                                <  1:2056677/246‑1 (MQ=255)
                                                   tACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                                                                                                                                                                                                                             <  1:297778/265‑1 (MQ=255)
                                                   tACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACaaa                                                                                                                                                                                                                                             >  2:297778/1‑265 (MQ=255)
                                                        agCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGATACAACATcaa                                                                                                                                                                                                                                                 <  1:1204959/256‑1 (MQ=255)
                                                             tAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTacaaca                                                                                                                                                                                                                                                     >  1:1436138/1‑247 (MQ=255)
                                                             tAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTc                                                                                                                                                                                                            >  1:1516567/1‑288 (MQ=255)
                                                             tAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGATTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTcc                                                                                                                                                                                                           >  1:2565104/1‑289 (MQ=255)
                                                                  gATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCTTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATAAACAAACGGTACATGGGCGATAACACCGTGGAATAATTCCGGGcc                                                                                                                                                                                                      >  2:2532082/1‑288 (MQ=255)
                                                                   aTGGTCATTGTTTTTCAGCTCGCGAAATTTAGAGAGCCGTTTGTACGGTTTCAAATATTGAGCCTGAGAATAGTGCAAAACGGTCGTGAACAGTAAAAGCGGATGAGCCTGTGCGGTGTAGTTGTCATACGGGGTGTAGCTTTTCATGTACTCGTAATATTGCGGAGCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATACATCAAGCATCGTTGTTAAAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCggggg                                                                                                                                                                                                      <  2:1871655/288‑3 (MQ=255)
                                                                      gTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGa                                                                                                                                                                                                  >  1:1636803/1‑289 (MQ=255)
                                                                               tttCAGCGCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATCTTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCa                                                                                                                                                                                         <  1:360714/289‑1 (MQ=255)
                                                                                ttCGGCTCGCGCAATTTTGCGGCCCATTTTGCCGGTTCCCAATATTGCACCTGGGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACAGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCaa                                                                                                                                                                                        <  2:288972/289‑1 (MQ=255)
                                                                                ttCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCaa                                                                                                                                                                                        <  2:1211194/289‑1 (MQ=255)
                                                                                ttCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCa                                                                                                                                                                                         >  1:409950/1‑288 (MQ=255)
                                                                                 tCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAAc                                                                                                                                                                                       <  2:1936271/289‑1 (MQ=255)
                                                                                             aattcgggACCCATTTTGCCGGTTCCCAAAATTGGACCTGAGAAGCGTGCAAACCGGTCGTTACCGGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTGATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGAGTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACAt                                                                                                                                                                           <  2:2046268/282‑1 (MQ=255)
                                                                                                      cccATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGTGCGATAACGCCGTGGAATAATTCCGGGTGTTGATTAATTGCAACGCCCATCAACATGCCCCCCg                                                                                                                                                                   <  1:839774/288‑1 (MQ=255)
                                                                                                      cccATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCg                                                                                                                                                                                                                       >  2:918340/1‑236 (MQ=255)
                                                                                                          ttttGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACt                                                                                                                                                               >  1:2450493/1‑288 (MQ=255)
                                                                                                           tttGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACAt                                                                                                                                                                           >  2:171870/1‑275 (MQ=255)
                                                                                                                cGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGcc                                                                                                                                                         <  1:2034964/288‑1 (MQ=255)
                                                                                                                    tCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCa                                                                                                                                                                                                                                                                   >  1:773923/1‑178 (MQ=255)
                                                                                                                         atatTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATaa                                                                                                                                               <  2:1321405/289‑1 (MQ=255)
                                                                                                                              gCACCTGCGGATCGTGCAAACTGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTGTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAg                                                                                                                                          <  2:242958/289‑1 (MQ=255)
                                                                                                                              gCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACg                                                                                                                                                                                      <  2:2001201/245‑1 (MQ=255)
                                                                                                                              gCACCTGAGAATCGGTGAAACCGGTCGGTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAg                                                                                                                                          <  2:775449/289‑1 (MQ=255)
                                                                                                                               cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAcc                                                                                                                                                                                                                                      <  1:2456673/196‑1 (MQ=255)
                                                                                                                               cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgc                                                                                                                                         >  1:2478768/1‑288 (MQ=255)
                                                                                                                               cACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTACGGAAACTGCGGGTTACCCCACTATTCAAACTCGCCAGCGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACATGGGCGCTAACTCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCACATCCACATGCCCCCCGCACTCCCGCCAATCGCATAACAAAga                                                                                                                                         >  1:2169238/1‑288 (MQ=255)
                                                                                                                                       aagcGTGCAAACCGGTCGTTACCAGGAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcgaaggag                                                                                                                                  <  2:2467387/285‑9 (MQ=255)
                                                                                                                                            tGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTacaaca                                                                                                                                                                                                                                                     <  2:1427384/168‑1 (MQ=255)
                                                                                                                                               aagccGGGCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTTACGTTGTCATCCGGGCTGTAGCTGTTCATGTCATCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGAGCGATAACGCCGGGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGc                                                                                                                         <  2:2245107/286‑1 (MQ=255)
                                                                                                                                               aaaCCGTTGGTGACCAGTAAATGCGGGTAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGc                                                                                                                         <  2:2450493/289‑1 (MQ=255)
                                                                                                                                                             cAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAAt                                                                                                           >  1:5252/1‑289 (MQ=255)
                                                                                                                                                                    tGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGc                                                                                                    <  2:1482641/289‑1 (MQ=255)
                                                                                                                                                                     gCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCa                                                                                                   <  2:107920/289‑1 (MQ=255)
                                                                                                                                                                                  tgCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCa                                                                                                                                                                 <  1:2329721/214‑1 (MQ=255)
                                                                                                                                                                                  tgCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCACCCGCa                                                                                                                                                                 >  2:2329721/1‑214 (MQ=255)
                                                                                                                                                                                   gCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATaa                                                                                      <  1:2414823/288‑1 (MQ=255)
                                                                                                                                                                                       tGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATTCATCGCAGGCATCCAGATAATAAtt                                                                                 >  2:1165285/1‑289 (MQ=255)
                                                                                                                                                                                       tGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCCCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTCTTAACAATGCATCGCAGGCACCAATAAAATCAtt                                                                                 >  2:1964255/1‑289 (MQ=255)
                                                                                                                                                                                        gACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCaa                                                                                                                                                                                        >  2:2078256/1‑185 (MQ=255)
                                                                                                                                                                                                     gggCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAAt                                                                                                           >  2:451798/1‑249 (MQ=255)
                                                                                                                                                                                                      ggCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGtttt                                                                                                                 >  1:282687/1‑242 (MQ=255)
                                                                                                                                                                                                       gCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcg                                                                                                                                        >  2:1534530/1‑216 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCg                                                                                                                                                                                                                                                                >  2:2517378/1‑96 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCg                                                                                                                                                                                                                                                                <  1:2517378/96‑1 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcgaaggag                                                                                                                                  >  2:1184558/1‑214 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcgaaggag                                                                                                                                  <  1:1184558/222‑9 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCTTTAAACGTATTTtccttct                                                                >  1:700486/1‑288 (MQ=255)
                                                                                                                                                                                                         tGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTCTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTttcttctt                                                               >  1:947877/1‑289 (MQ=255)
                                                                                                                                                                                                            aGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCAt                                                                                              <  1:2002802/255‑1 (MQ=255)
                                                                                                                                                                                                                 ttCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCaa                                                                                                                                                                                        >  1:1897962/1‑160 (MQ=255)
                                                                                                                                                                                                                   cATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAAttt                                                      >  1:1957691/1‑288 (MQ=255)
                                                                                                                                                                                                                   cATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGCGCGTTGGTTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcgaaggag                                                                                                                                  >  1:1757541/1‑204 (MQ=255)
                                                                                                                                                                                                                           cGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATaa                                                                                                                                                                                                                            >  1:2251267/1‑114 (MQ=255)
                                                                                                                                                                                                                                   tGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGcc                                                                                                                                                                                    >  2:2703630/1‑146 (MQ=255)
                                                                                                                                                                                                                                      ggATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCAttgtt                                  >  1:1079113/1‑289 (MQ=255)
                                                                                                                                                                                                                                        aTCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCACCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGcc                                                                                                                                                                        <  1:573476/153‑1 (MQ=255)
                                                                                                                                                                                                                                          ccTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCa                                                                                                                                                                                         >  1:2618450/1‑134 (MQ=255)
                                                                                                                                                                                                                                          ccTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCg                                                  <  1:51488/269‑1 (MQ=255)
                                                                                                                                                                                                                                          ccTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGccc                              <  1:916446/289‑1 (MQ=255)
                                                                                                                                                                                                                                               gggTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGAt                                                                                        >  2:752500/1‑226 (MQ=255)
                                                                                                                                                                                                                                                  ttACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTcac                      <  2:1875441/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aCCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGcc                                                                                                                                                         >  1:752824/1‑156 (MQ=255)
                                                                                                                                                                                                                                                    aCCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAgcgaaggag                                                                                                                                  >  1:1550232/1‑171 (MQ=255)
                                                                                                                                                                                                                                                    aCCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCa                                                                                                   >  1:1298298/1‑210 (MQ=255)
                                                                                                                                                                                                                                                    aCCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTAACTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTcacc                     >  1:2397549/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          ctctTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTaa                                                                               <  1:728156/224‑1 (MQ=255)
                                                                                                                                                                                                                                                          ctctTCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTaa                                                                               >  2:728156/1‑224 (MQ=255)
                                                                                                                                                                                                                                                             ttCAAACTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGa           <  1:1288268/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cAAACTCACCAGTGGGAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCAATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATAAACATGCCCCCCGCACTCCCGGCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAAc         <  2:2265908/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  aCTCACCAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCt                                               <  1:263076/248‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTttct                                                                   >  1:2665064/1‑223 (MQ=255)
                                                                                                                                                                                                                                                                       ccAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTttct                                                                   <  2:2665064/223‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGa           >  2:2152118/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                       ccAGTGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTCCTTCTTCAGAAAtttt                                                     >  2:844150/1‑237 (MQ=255)
                                                                                                                                                                                                                                                                           tGGTAAGAGGAATTGATTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGCGAAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTAc                                         >  1:1874475/1‑245 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                            
CGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGTCGGTACAGAGCAATAAAAGATGGTCATCGGTTTTCAGCTCGCGCAATTTAGCGACCCATTTTGCCGGTTCCCAATATTGCACCTGAGAATCGTGCAAACCGGTCGTTACCAGTAAATGCGGATAAGCCTGTGCGGTGACGTTGTCATACGGGCTGTAGCTTTTCATGTACTCGTAATATTGCGGATCCTGCGGGTTACCCCACTCTTCAAACTCACCAGTGGTAAGAGGAATACTTTCATCAAGCATCGTTGTTACAACATCAACAAACGGTACCTGGGCGATAACGCCGTGGAATAATTCCGGGCGTTGATTAATTGCAACGCCCATCAACATGCCCCCCGCACTCCCGCCCATCGCATAACAAAGGCTAGGAGAGCCATAGCCCAGTTTTAACAATGCATCGCAGGCATCAAGATAATCATTAAACGTATTTTTCTTCTTCAGAAATTTTCCGTCTTCGTACCATTGTTGCCCCAGCTCACCACCGCCGCGAACATGGACA  >  CP042583/1607572‑1608122

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A