Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,620,727 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,620,727 | 0 | A | T | 98.8%
| 594.4
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base T (121/128); minor base G (3/0); total (126/128) |
| Fisher's exact test for biased strand distribution p-value = 1.18e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,620,728 | 0 | C | G | 99.6%
| 590.7
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (126/127); minor base T (0/1); total (126/128) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 1,620,729 | 0 | T | A | 98.4%
| 572.3
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (1/1); major base A (121/124); minor base C (4/0); total (126/128) |
| Fisher's exact test for biased strand distribution p-value = 1.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 254 total aligned reads displayed.
TCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGGCTCAGATTGATTAACGCACGACGGCGACTGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCG > CP042583/1620447‑1621008
|||
cccttgcgaggcCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCCCGACGGCGTGAGCTTTTTcc > 1:381274/10‑288 (MQ=255)
gcgaggcCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGGGAGCTTTTTCCCAgtcg > 1:768227/5‑289 (MQ=255)
ccATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCTAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCgg < 1:1542595/288‑1 (MQ=255)
aTCAGCATGGCAGGAATATCGCCGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCaa < 2:238923/289‑1 (MQ=255)
aTCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCaa < 1:625394/289‑1 (MQ=255)
tCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCaaa < 1:2300094/289‑1 (MQ=255)
cAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGTTCCCCACCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCCACAATCGCTTCGCGTTCTGCTTCACTCCGTCCTGGAAAGCAGAGCGACACATTGATTAACGCCCGACGGCGTGCGCTTTTTCCCAGTTCTCCGGCcaaa > 2:1630041/1‑289 (MQ=255)
ggCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTccc > 2:2292069/1‑289 (MQ=255)
cAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCa > 1:1900753/1‑288 (MQ=255)
aGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAg < 1:431945/288‑1 (MQ=255)
aGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAg < 1:1473869/288‑1 (MQ=255)
aaTATCGCCGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCCTTTTCCCAGTCGTCCGGCAAAACGTCCCAGcc < 1:2353604/287‑1 (MQ=255)
aaTATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGc < 1:977707/286‑1 (MQ=255)
atCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGcc < 2:1235411/289‑1 (MQ=255)
tCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCa > 1:749255/1‑289 (MQ=255)
aCGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCACCCGTGCCAGaa > 2:552466/1‑289 (MQ=255)
gCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATgg > 2:220855/1‑289 (MQ=255)
cGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGa > 2:360939/1‑287 (MQ=255)
cGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGa > 1:940989/1‑287 (MQ=255)
cGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGa > 1:2058179/1‑287 (MQ=255)
cGGCACCAGAAAGATAACTTTCCCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCCAACATCTCATCAACAATCGCTTCGCGTTCACAGTCACTACGTTCCGGAAAGTAGAGCGACAGCTTGATTACCGCATGACGGCCGGCGCTTTTTCCCAGTCGTCCGGGAAAACTTCCCAACAGCGCCCGAACGGGATCaagagaa > 2:1031378/1‑283 (MQ=255)
cACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCaa < 2:2728306/251‑1 (MQ=255)
ccAGAAAGATGACTTTCCGGTTATTACGCCGAAGCTCTTCGATGTGCTCCCGCCCTTGCCAGTCAACGGGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTgg < 2:1200360/289‑1 (MQ=255)
ccAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTgg < 1:2710306/289‑1 (MQ=255)
cAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCCCGACGGCGGGAGCTTTTTCCCAGTCGTCCGGCAAAACGGCCCAGCCGTGCCCGAATGGGATCACGGAACTTTggc > 2:460824/1‑289 (MQ=255)
aaCTTTCTCGTTATGACGCGGCACCTCTTCGCTGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTGACCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCAC‑ACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAg < 2:531057/289‑1 (MQ=255)
aCTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAg < 1:1001551/289‑1 (MQ=255)
ctcGATATGTCGCCGCATTTCTTCAGTCGTCCCCAGCCCTTGCCAGTCAACGCGCGGCGGAAGTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCCTTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCAACAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATa < 2:1451527/289‑1 (MQ=255)
cgccgcATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATc > 2:336708/1‑288 (MQ=255)
ctgaTCTCTTCGATGATCGCCAGCCCTTGCCAGCCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCgctg < 2:1777683/286‑1 (MQ=255)
cgcATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCgctg < 2:768227/289‑1 (MQ=255)
cATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGa > 1:2537412/1‑251 (MQ=255)
cATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTGTGGCGGCGTTAAAGCGTTAGCCCCCCTCgctgc > 2:2338506/1‑288 (MQ=255)
cATCTCTTCGACGCTCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCgctgct < 1:1181021/289‑1 (MQ=255)
aTCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCgctgct < 1:2489096/288‑1 (MQ=255)
aTCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCgctgct < 1:274369/288‑1 (MQ=255)
ttcctcaatCCCCAGCCCTTGCCAGTCAACGCTCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACCCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACCATCGCTTCGCGTTCAGCGTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGccc < 2:838394/282‑1 (MQ=255)
cGATGATCTCCAGCCCTTGGCAGTCACCCAGCGGCTGAATTGTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCGTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAg < 2:726036/289‑1 (MQ=255)
tgatCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCa < 1:1804604/289‑1 (MQ=255)
tctcCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCAGCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATg < 1:2135879/288‑1 (MQ=255)
ccgccAGCCCTTTCCAGTCAACGCGCGGCTGACTTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATg < 1:2191811/285‑1 (MQ=255)
ctcCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGc > 1:1871354/1‑288 (MQ=255)
ctcCAGCCCTGGCCAGCAAACCCCCGGCTGAATTTTCTCCGGCCGGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCt < 2:940989/289‑1 (MQ=255)
tcCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGCATGGGATCAACGAACCTTGGCGGGTGTAAAGCGATACCCCGCGACGCTGCTAGGCACAGACagtcc > 2:68948/1‑284 (MQ=255)
tcCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAg < 1:829678/281‑1 (MQ=255)
gCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCa < 1:224124/289‑1 (MQ=255)
cccTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAg > 1:2585859/1‑289 (MQ=255)
tGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTTCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATTGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAg > 1:1243410/1‑288 (MQ=255)
tGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAg < 2:1896527/203‑1 (MQ=255)
tGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAgc > 1:1757121/1‑289 (MQ=255)
gCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAgc > 1:1372896/1‑288 (MQ=255)
gCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCCACGCCCCGCCCTGCTCCCCAGTacc > 2:2641454/1‑286 (MQ=255)
gCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGAGCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTATGCCCAGCCATGCTCCCCAGTAgcc > 1:2669397/1‑288 (MQ=255)
gCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTAGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAgc > 1:2012851/1‑288 (MQ=255)
ttttCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATc < 1:11314/289‑1 (MQ=255)
ttCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCaa < 2:2418490/289‑1 (MQ=255)
tctcCGGCCCGCGTATTGCCAACTCAGCAATCATTGCACTCGCTTGCGGCGCTGTGGCAAACATCTCATCACCAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTACCGAACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCaaa < 2:1326540/289‑1 (MQ=255)
tcCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATa > 2:587181/1‑222 (MQ=255)
tcCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACt < 2:2482482/289‑1 (MQ=255)
cccGGCCGCCCTATTGCCAACCCAGCCTTCCTTGCCACCGCTGGCGGCGCGGTGGCAAACGTCTCATCAACTATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACt < 2:1713885/288‑1 (MQ=255)
cccGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAg > 2:274503/1‑212 (MQ=255)
cgcgTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCt > 1:1327314/1‑245 (MQ=255)
ccATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAg > 1:243679/1‑192 (MQ=255)
ccgtGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGGTCCGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGCTCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGc < 2:1105483/286‑1 (MQ=255)
tGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTAtttttttt < 2:2584277/275‑1 (MQ=255)
ggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTc < 1:2683799/288‑1 (MQ=255)
ggcgCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTc < 1:559073/288‑1 (MQ=255)
aaaCATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATa < 2:785977/289‑1 (MQ=255)
aTCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGc < 2:629922/289‑1 (MQ=255)
ctcATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCaa > 1:1052535/1‑289 (MQ=255)
acaaTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAaatcaa < 1:1731512/289‑1 (MQ=255)
acaaTCGCTTCGCGTTCAGCGTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAaatcaa < 1:702024/289‑1 (MQ=255)
acaaTCGCTTCCCGTTCAGCTTCACTCCGTTCTGGAAAGCAGAGCGCCAGATTGATTAACGCACGACGGCGTGGGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCTGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAaatcaa < 2:1941914/289‑1 (MQ=255)
caaTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAaatcaat > 2:905086/1‑289 (MQ=255)
caaTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAaatcaa > 1:1955013/1‑288 (MQ=255)
aTCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCt < 1:336708/289‑1 (MQ=255)
tCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGt > 2:1331914/1‑139 (MQ=255)
tCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTg > 2:1655355/1‑289 (MQ=255)
gCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCCAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTCGCGGCGTTAAAGCTCTACCCTCCATCGCTGCTACGCCCAGCCATGCTCCCCAGCAGCGCGGGTGGCGAAAGCATTTCTCAAACTCAGGATTCTTGTCGCTATTGTCTTTTTTCGTTTCGATGCTTTCTCTATTTCCGGTTAGGCAAAaatcaacacgtt > 2:1605710/1‑283 (MQ=255)
gCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGt < 1:1631519/289‑1 (MQ=255)
ctttCGCGTTCAGCTTCACTACGTTTTGGAAAGCAGGGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGt < 2:1906220/287‑1 (MQ=255)
tCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGAt > 1:1787481/1‑289 (MQ=255)
ttCACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAGCGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcgg < 1:661529/288‑1 (MQ=255)
tCACTACGTTCTGGAAAGCAGGGCGACAGATTGATTAACGCACGACGGCGTGGGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcggcg < 2:2675425/289‑1 (MQ=255)
cACTACGTTCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGCAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCTGATAAGGCAAAAATCAATCTGGTGATAgt > 1:2417228/1‑279 (MQ=255)
ttCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGTGCTTTTTCCCAGTCGTCCGGCAAAACGTCCTCGCCGTGCCAGAATGGGATCACGGAACTCTGGCGGCGTTAAAGCGATACCCCCCATCGCTGCTACGCCCAGCCATCTCCCCCAGTAGCGCGGGTCGCGACAGCAGTTAGCAAACTCAGGAATGTCTTCTCTATTATTTTTTTTCTGTTCCCTACTATTCCAGTTTCGGCTAAGGTAAAAATCAATCTGGTGATATGTTAGTGGCGCAACTTg > 2:1863766/1‑288 (MQ=255)
ttCTGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTg > 1:515131/1‑288 (MQ=255)
tGGAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGccc > 1:1302875/1‑288 (MQ=255)
gAAAGCAGAGCGACAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCg > 1:1929245/1‑288 (MQ=255)
cagagcgacAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAgcggc > 2:2257853/9‑270 (MQ=255)
cagagcgacAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTA‑TTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCaaa > 1:1559861/9‑289 (MQ=255)
agcgacAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGTAAGTGTAGCGGGGCAACTTTCCCCGCACCAAATa > 2:1481029/6‑289 (MQ=255)
agcgacAGATTGATTAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCG‑TTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTTAAAGGTTAACGGGGCAAATTTCCCCGCCACaaaaaa > 2:2174919/6‑289 (MQ=255)
ttgattAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATaaaaaa < 1:821325/285‑1 (MQ=255)
attAACGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAAGGTATTCGCTATTATTTTTTTTCGTTCCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGAAATGGTATCGGCGCAACTTGCCCCGCCCCAACTAAAAAAAGCCGGt > 2:1850549/1‑289 (MQ=255)
aacgaacgACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTact < 1:2338506/289‑1 (MQ=255)
aaCGCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTact < 1:263561/289‑1 (MQ=255)
gCACGACGGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTactg > 1:1097931/1‑287 (MQ=255)
gacgGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTac > 2:1976172/1‑281 (MQ=255)
gacgGCGTGAGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCg > 1:355179/1‑289 (MQ=255)
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TCTGCCCTTGGCTGGCCATCAGCATGGCAGGAATATCGACGGCCCAACCGTGCGGCACCAGAAAGATAACTTTCTCGTTATTACGCCGCATCTCTTCGATGATCTCCAGCCCTTGCCAGTCAACGCGCGGCTGAATTTTCTCCGGCCCGCGTATTGCCAACTCAGCCATCATTGCCATCGCTTGCGGCGCGGTGGCAAACATCTCATCAACAATCGCTTCGCGTTCAGCTTCACTACGTTCTGGAAAGCAGAGGCTCAGATTGATTAACGCACGACGGCGACTGCTTTTTCCCAGTCGTCCGGCAAAACGTCCCAGCCGTGCCAGAATGGGATCACGGAACTTTGGCGGCGTTAAAGCGATACCCGCCATCGCTGCTACGCCCAGCCATGCTCCCCAGTAGCGCGGGTGGCGAAAGGATTTATCAAACTCAGGAATGTATTCGCTATTATTTTTTTTCGTTTCCATGCTTTTCCAGTTTCGGATAAGGCAAAAATCAATCTGGTGATAGTGTAGCGGCGCAACTTGCCCCGCACCAAATAAAAAAAGCCGGTACTGACTGCG > CP042583/1620447‑1621008
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A