Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,623,129 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,623,1290AT100.0% 725.4 / NA 303intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (147/156);  total (147/156)
*CP0425831,623,1300CG100.0% 730.7 / NA 303intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (147/156);  total (147/156)
*CP0425831,623,1310TA100.0% 730.9 / NA 303intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (147/156);  total (147/156)

Only 100 of 303 total aligned reads displayed.

CGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCGCTTGGGCGCAGACTATAATCATGTTCACTAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGTTTCCCTGGAAAAT  >  CP042583/1622850‑1623407
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
cgcTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCg                                                                                                                                                                                                                                                                                >  2:1734640/1‑289 (MQ=255)
               aaGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑aaaa                                                                                                                                                                                                                                                                  >  1:1138335/1‑287 (MQ=255)
               aaGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAAc                                                                                                                                                                                                                                                                 <  1:407496/288‑1 (MQ=255)
                aGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAAcc                                                                                                                                                                                                                                                                >  1:1992031/1‑288 (MQ=255)
                aGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAACCATGTTCTGAAGCGCTTTCAGGAAGT‑AAAAcc                                                                                                                                                                                                                                                                >  2:375062/1‑288 (MQ=255)
                aGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTAAATCCGAAGGGCTCAGTGAATAATCATGTTTTGAAGCGCCGACAGGAAGT‑AAAAcc                                                                                                                                                                                                                                                                >  2:1243235/1‑288 (MQ=255)
                     aaGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTCCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACCACTAAGTCCGCGTTCTGTAAGCGTTGTCCATCCGCTGGGCGCAGGGAATAATCATGTTCTGAAGCGCTGTCAGTCAGT‑AAAACCcctgtt                                                                                                                                                                                                                                                          >  2:1132120/1‑289 (MQ=255)
                           cATGTGTAAATCGCCGTGATAGTGATCTTCGTCACTTTTTTCCGCGTGTTCGGGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgtttctgtt                                                                                                                                                                                                                                                    <  1:2667615/289‑1 (MQ=255)
                            aTGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACACTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgtttctgtt                                                                                                                                                                                                                                                    <  2:1541435/288‑1 (MQ=255)
                                       gCCGTGATGGTGATCTTCGTCACTTTTTTTCGCGTGGTCGTGGTCATCCTCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCa                                                                                                                                                                                                                                        <  2:1450517/289‑1 (MQ=255)
                                                   aTCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTAc                                                                                                                                                                                                                                                  >  2:2567708/1‑267 (MQ=255)
                                                    tttcagtaaCTTGTTTCCGCGTGGTCGTGATCATACTCAACGTCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGa                                                                                                                                                                                                                           <  2:2022786/281‑1 (MQ=255)
                                                        cGTCACTTTTTTCGGCGTGGTCGTATTCATCATCATCGCCGTGAATCCTTTTCTTCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCCTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGaa                                                                                                                                                                                                                       <  2:1293959/289‑1 (MQ=255)
                                                        cGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGaa                                                                                                                                                                                                                       >  2:2290925/1‑289 (MQ=255)
                                                         gTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCa                                                                                                                                                                                                                                              <  2:451872/265‑1 (MQ=255)
                                                         gTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCa                                                                                                                                                                                                                                              >  1:451872/1‑265 (MQ=255)
                                                         gTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGCTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgt                                                                                                                                                                                                                                                           >  2:2220314/1‑252 (MQ=255)
                                                         gTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGCTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgt                                                                                                                                                                                                                                                           <  1:2220314/252‑1 (MQ=255)
                                                             tttttttCCTCGTGCTCGTGATCATCATCATCGCCGTGAATATTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCACAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCaa                                                                                                                                                                                                                  <  1:358072/288‑1 (MQ=255)
                                                                                      catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGCAGCGATGAACCCAACGGGTTTAAGCGAAGCAACCAcggc                                                                                                                                                                                         >  2:86784/1‑289 (MQ=255)
                                                                                      catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAg                                                                                                                                                                                                                              >  1:2302108/1‑252 (MQ=255)
                                                                                      catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc                                                                                                                                                                                         >  2:1158124/1‑289 (MQ=255)
                                                                                      catcatcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc                                                                                                                                                                                         >  2:1523643/1‑289 (MQ=255)
                                                                                         catcGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACggcggc                                                                                                                                                                                      >  2:1055296/1‑289 (MQ=255)
                                                                                              ccGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCa                                                                                                                                                                                                                                        <  1:587997/234‑1 (MQ=255)
                                                                                                  gAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTATACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGc                                                                                                                                                                             <  2:526362/289‑1 (MQ=255)
                                                                                                    gtttaaggggaaggTAGCGGTTTCCCACCTTCAGGCGGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTGTCTGACCGGGTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGcc                                                                                                                                                                            <  2:1497490/275‑1 (MQ=255)
                                                                                                            catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACTCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa                                                                                                                                                                   <  1:2542394/289‑1 (MQ=255)
                                                                                                            catcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa                                                                                                                                                                   <  1:1372036/289‑1 (MQ=255)
                                                                                                            caaccgTATCGGTTCGACCTGTTCAAGCTGCGCAACCGTTGCCTGCTTCGCTCCTGGTAATTTTCTTACAGGTTTTTGCATAAACGCGTCCATCTCCGAGCCAACCCAAACGACTAAGTCCTCGTTCTGTAAGCGTTTTACATCCGATGGGCTCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa                                                                                                                                                                   <  2:1675903/284‑1 (MQ=255)
                                                                                                             atcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGTCCTGTGTTGCa                                                                                                                                                                   >  2:2711877/1‑288 (MQ=255)
                                                                                                             atcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc                                                                                                                                                                  <  1:83010/289‑1 (MQ=255)
                                                                                                             atcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc                                                                                                                                                                  <  1:1158156/289‑1 (MQ=255)
                                                                                                              tcaGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAcc                                                                                                                                                                 <  1:226780/289‑1 (MQ=255)
                                                                                                                  tAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgt                                                                                                                                                                                                                                                           <  2:2393277/195‑1 (MQ=255)
                                                                                                                         ttCACATCTTCAAGCTGCGCATTCGTTCCCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCagagag                                                                                                                                                      <  1:2453071/289‑1 (MQ=255)
                                                                                                                            acaTCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGcc                                                                                                                                                                            <  1:1077094/264‑1 (MQ=255)
                                                                                                                            acaTCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGcc                                                                                                                                                                            >  2:1077094/1‑264 (MQ=255)
                                                                                                                            acaTCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc                                                                                                                                                                  >  1:1497490/1‑274 (MQ=255)
                                                                                                                            acaTCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAgcg                                                                                                                                                    >  2:2261188/1‑288 (MQ=255)
                                                                                                                                  tCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATa                                                                                                                                             <  1:103782/289‑1 (MQ=255)
                                                                                                                                  tCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATa                                                                                                                                             >  2:1166746/1‑289 (MQ=255)
                                                                                                                                        tGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTccc                                                                                                                                                             <  1:2392044/267‑1 (MQ=255)
                                                                                                                                        tGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAAtgctg                                                                                                                                       >  1:734592/1‑289 (MQ=255)
                                                                                                                                          cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGc                                                                                                                                                                                                                                         <  1:1246006/189‑1 (MQ=255)
                                                                                                                                          cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCa                                                                                                                                                                                                                                        <  2:805575/190‑1 (MQ=255)
                                                                                                                                          cgcAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCg                                                                                                                                     >  1:2257181/1‑289 (MQ=255)
                                                                                                                                            cAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGACCGGCGGACAATCCTGCGaa                                                                                                                                   >  2:2737313/1‑289 (MQ=255)
                                                                                                                                                         cTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGGGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGttttt                                                                                                                      >  1:956049/1‑289 (MQ=255)
                                                                                                                                                                   ggTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGcc                                                                                                                                                                            >  1:2639000/1‑225 (MQ=255)
                                                                                                                                                                   ggTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGcc                                                                                                                                                                            <  2:2639000/225‑1 (MQ=255)
                                                                                                                                                                   ggTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACa                                                                                                            >  1:1617283/1‑289 (MQ=255)
                                                                                                                                                                   ggTAATTTGCTTACCGGTTGTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCACGGTCTGTAAGCGTTTTACATCCGATGGGCGCCGTGAATGATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCAAACGGGTTTAAGCGAAGCGACAACGGCGGCATCGGCGGCCTGTGGTTCACCTCCCCAGATAGCGTCGGCTAATGCTGCGAAAAGAAGCTTTTTTTTACGTAACa                                                                                                            >  2:193499/1‑289 (MQ=255)
                                                                                                                                                                         ttGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAACAGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGTAAAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATg                                                                                                       <  2:2473660/289‑1 (MQ=255)
                                                                                                                                                                         ttGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggcg                                                                                                                                                                                        <  2:749958/207‑1 (MQ=255)
                                                                                                                                                                          tGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCg                                                                                                     <  2:1617283/289‑1 (MQ=255)
                                                                                                                                                                          tGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCg                                                                                                     <  1:309649/289‑1 (MQ=255)
                                                                                                                                                                          tGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCg                                                                                                     <  2:1022651/289‑1 (MQ=255)
                                                                                                                                                                          tGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCg                                                                                                     <  1:2317311/289‑1 (MQ=255)
                                                                                                                                                                            cTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAAcggc                                                                                                                                                                                         <  1:2073815/203‑1 (MQ=255)
                                                                                                                                                                             ttACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCAc                                                                                                                                                                  >  2:1378753/1‑225 (MQ=255)
                                                                                                                                                                              tACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCa                                                                                                 >  1:647762/1‑289 (MQ=255)
                                                                                                                                                                               aCCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCaa                                                                                                >  1:1960374/1‑289 (MQ=255)
                                                                                                                                                                                    tttttGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAgc                                                                                                                                                                                                       <  1:1007587/181‑2 (MQ=255)
                                                                                                                                                                                       ttGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTa                                                                                        <  1:2075668/289‑1 (MQ=255)
                                                                                                                                                                                       ttGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTa                                                                                        <  1:2736930/289‑1 (MQ=255)
                                                                                                                                                                                        tGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAAAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTaa                                                                                       <  1:1088771/289‑1 (MQ=255)
                                                                                                                                                                                        tGCACAAACGCTTCCATCTCGGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTaa                                                                                       <  2:931127/289‑1 (MQ=255)
                                                                                                                                                                                              aaCGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTAt                                                                                                                  <  1:889564/256‑1 (MQ=255)
                                                                                                                                                                                                   ttCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATgag                                                                             <  1:1227484/288‑1 (MQ=255)
                                                                                                                                                                                                    tCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGaa                                                                                                                                                                                                                               >  2:2589760/1‑141 (MQ=255)
                                                                                                                                                                                                    tCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGaa                                                                                                                                                                                                                               <  1:2589760/141‑1 (MQ=255)
                                                                                                                                                                                                        tctcCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTGTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAgtgt                                                                       <  1:1685500/289‑1 (MQ=255)
                                                                                                                                                                                                          tcCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGa                                                                     <  1:1462096/289‑1 (MQ=255)
                                                                                                                                                                                                          tcCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGa                                                                     <  1:524803/289‑1 (MQ=255)
                                                                                                                                                                                                           ccGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATgag                                                                             >  1:1785332/1‑280 (MQ=255)
                                                                                                                                                                                                             gggCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACTTAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGatat                                                                  >  1:1883107/1‑289 (MQ=255)
                                                                                                                                                                                                             gggCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGatat                                                                  >  1:1526342/1‑289 (MQ=255)
                                                                                                                                                                                                               gCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAgg                                                                                                                                                                                                                                                                           <  1:1719350/87‑1 (MQ=255)
                                                                                                                                                                                                                  aaCCCAAACGACTAAGTCCTCGTTCTGGAAGCGTTTGACATCCTATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATaa                                                             <  2:1774307/289‑1 (MQ=255)
                                                                                                                                                                                                                   aCCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTg                                                                                                                                                                     >  1:989616/1‑184 (MQ=255)
                                                                                                                                                                                                                   aCCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAAc                                                            <  2:2073985/289‑1 (MQ=255)
                                                                                                                                                                                                                          cGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTAt                                                                                                                  >  1:1403006/1‑228 (MQ=255)
                                                                                                                                                                                                                              tAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAg                                                                                                                                                                                                                                 >  2:312222/1‑113 (MQ=255)
                                                                                                                                                                                                                              tAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATaa                                                             >  1:1177792/1‑277 (MQ=255)
                                                                                                                                                                                                                              tAAGTCCGCGTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGCTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGact                                                 >  1:787102/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gcgTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCtctgtttct                                                                                                                                                                                                                                                       >  1:805620/1‑84 (MQ=255)
                                                                                                                                                                                                                                     gcgTTCTGTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAgtg                                                                        <  2:590758/259‑1 (MQ=255)
                                                                                                                                                                                                                                            gTAAGCGTTTTACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTaaa                                   >  1:217061/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGa                                                                     <  2:1969703/246‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACAttt                                                        >  2:1212401/1‑259 (MQ=255)
                                                                                                                                                                                                                                                     ttACATCCGATGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAAAATg                          >  2:2498706/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCa                                                                                                                                                                   >  1:191958/2‑143 (MQ=255)
                                                                                                                                                                                                                                                              atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTa                                                                                        <  1:1810063/217‑1 (MQ=255)
                                                                                                                                                                                                                                                              atGGGCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTa                                                                                        >  2:1810063/2‑218 (MQ=255)
                                                                                                                                                                                                                                                                 ggCGCAGTGAATAATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGt               <  1:1560546/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cagtgaataATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATAATATAACATTTCAGTACGACTGCAAGACTAAACTTAACATGACAAGTCACGTTTc            >  2:2236172/7‑287 (MQ=255)
                                                                                                                                                                                                                                                                        tgaataATCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGTTTCCCTgg       >  2:688783/4‑289 (MQ=255)
                                                                                                                                                                                                                                                                             aaTCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCg                                                                                                     <  2:188991/190‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aaTCATGTTCTGAAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGCGAAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTaa                                                                                       <  2:2172118/204‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
CGCTATCTCTGGGGAAAGCCAAAGATGCATGTTGAAATCGCCGTGATGGTGATCTTCGTCACTTTTTTCCGCGTGGTCGTGATCATCATCATCGCCGTGAATACTTTTCATCAGTAGCGGTTTCACATCTTCAAGCTGCGCAATCGTTACCTGCTTCGCTCCTGGTAATTTGCTTACCGGTTTTTGCATAAACGCTTCCATCTCCGGGCCAACCCAAACGACTAAGTCCGCGTTCTGTAAGCGTTTTACATCGCTTGGGCGCAGACTATAATCATGTTCACTAGCGCCGTCAGGAAGT‑AAAACCTCTGTTTCTGTTACCCCATCAGCAATGGCAGAAGCGATGAACCCAACGGGTTTAAGGCTAGCGACAACGGCGGCATCTGCGGCCTGTGTTGCACCTCCCCAGAGAGCGGCGGATAATGCTGCGAAAAGAAGCGTTTTTTTATGTAACATAATGCGACCAATAATCGTAATGAATATGAGAAGTGTGATATTATAACATTTCATGACTACTGCAAGACTAAAATTAACATGACAAGTCTGGTTTCCCTGGAAAAT  >  CP042583/1622850‑1623407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A