Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,633,828 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,633,8280AT98.2% 500.5 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (4/0);  new base T (105/109);  total (109/109)
Fisher's exact test for biased strand distribution p-value = 1.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,633,8290GC99.5% 507.1 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (107/108);  total (109/109)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,633,8300CG98.2% 495.2 / NA 218intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (4/0);  new base G (104/109);  total (109/109)
Fisher's exact test for biased strand distribution p-value = 5.96e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 218 total aligned reads displayed.

TCCGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCAGCGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCAAGCATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTAGCGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCA  >  CP042583/1633552‑1634105
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
tCCGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGgtg‑gtg                                                                                                                                                                                                                                                                            <  1:1586379/288‑1 (MQ=255)
 ccGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTAGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATggtg‑gt                                                                                                                                                                                                                                                                             >  1:1995478/1‑286 (MQ=255)
                        attTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATACTGATAATCGCACAATTATTGCCTTCGACAACTCCCCGGCGATGATTTAACGCGGCCGTCGTCATATTAACGCATATAAAGCCCCCACGCCAGTACACGTCATTGTAGGTACTACTCGCGATATCGCGATTCAAAA‑ACTATCGTCGTGTGTGTAGAATTTTACCCTGTCATTCCTgc                                                                                                                                                                                                                                                   >  2:1768962/1‑288 (MQ=255)
                           tCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTACACTGCCTTCAAGTTGATATTCGCGATATCGCCCTTGACAACCCATCATTGGGT‑GTGCTTACTTTTACTCTCCAACTccctgaa                                                                                                                                                                                                                                                 >  2:2080835/1‑283 (MQ=255)
                                     gTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCCTTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAgc                                                                                                                                                                                                                                       >  2:2114910/1‑288 (MQ=255)
                                       atttttgCCGCGCGCTT‑GTTCTAACCTGGTACGCCGGTTTACTATTTGGGTTGTGCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGcc                                                                                                                                                                                                                                    <  2:2523561/283‑1 (MQ=255)
                                       aTGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGcc                                                                                                                                                                                                                                    >  2:114856/1‑289 (MQ=255)
                                       aTGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGcc                                                                                                                                                                                                                                    <  1:354967/289‑1 (MQ=255)
                                             gCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGt                                                                                                                                                                                                                              >  2:156243/1‑289 (MQ=255)
                                               cGAGCGCTTCGTTC‑ACCCTGGTACGAAGGTTTCCGATCTGGGTTGTTTTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTa                                                                                                                                                                                                                            <  1:2240942/289‑1 (MQ=255)
                                                  gcgcTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAg                                                                                                                                                                                                                                        >  2:25927/1‑274 (MQ=255)
                                                  gcgcTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCACCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGACATTGAAGGTGATATTCGCTATAGCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAACTCCTGGATCCTGTCGAGAGCCAGGCGGTAcat                                                                                                                                                                                                                         >  2:583393/1‑287 (MQ=255)
                                                        cGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTTATCATGATAATTGCACAATTATTGCCGTCGACAACTCCCACGCGATGATTGAACGCAGCAGTCGTCATATTTACGACTATAAAGCCCCCACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCAGTGAAGACGCCACGCTGGTG‑GCTATGAATTTTACCCTGCCATTCACGCTACCTTCCGCTCGTCAGGTCTTCCTGCATaaa                                                                                                                                                                                                                   >  2:1611112/1‑289 (MQ=255)
                                                           tC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTCCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAAt                                                                                                                                                                                                                 <  1:2422257/288‑1 (MQ=255)
                                                               aCCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAACTTTa                                                                                                                                                                                                              >  1:2616841/1‑288 (MQ=255)
                                                                ccTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATc                                                                                                                                                                                                            <  1:2114910/289‑1 (MQ=255)
                                                                   gttacgtcgttttCCGATCGTGTTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCaa                                                                                                                                                                                                          <  2:1029350/278‑1 (MQ=255)
                                                                   ggTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAg                                                                                                                                                                                                         >  1:1040356/1‑289 (MQ=255)
                                                                     tacgacggTTTCCGATTTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACACCTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCG‑CAGGCGTTACTGGATAAAATTTATCAAggg                                                                                                                                                                                                       <  2:370731/282‑1 (MQ=255)
                                                                          aGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCa                                                                                                                                                                                                                                                           <  1:2369099/232‑1 (MQ=255)
                                                                                   aTCTGGGTTGTTCGCTGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCcggcg                                                                                                                                                                                          <  2:2717941/288‑1 (MQ=255)
                                                                                      tGGGTTGTTCTCTGGGCGCGGCGACGCTCTCGGTGGGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGAG‑GTGCGGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTTACAAGGGCTGAAACCCggaggccc                                                                                                                                                                                      >  2:167278/1‑287 (MQ=255)
                                                                                         gttgttCTCTGGGGGCGGCGACGCTCTCGGGGCGTAGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCa                                                                                                                                                                                                           <  2:2488077/265‑1 (MQ=255)
                                                                                                  tGGGCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCtttc                                                                                                                                                                          >  2:1309464/1‑287 (MQ=255)
                                                                                                   gggCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAAc                                                                                                                                                                                                 >  1:2488077/1‑265 (MQ=255)
                                                                                                    ggCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTc                                                                                                                                                                                                                                                       <  1:459939/210‑1 (MQ=255)
                                                                                                    ggCGCGGCGACGCTCTCGGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTc                                                                                                                                                                                                                                                       >  2:459939/1‑210 (MQ=255)
                                                                                                                     ggtgcgtCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGaa                                                                                                                                                       <  1:1500609/288‑1 (MQ=255)
                                                                                                                             gCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCaa                                                                                                                                               <  2:1134061/289‑1 (MQ=255)
                                                                                                                                 cATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATc                                                                                                                                                                                                            >  2:1010983/1‑224 (MQ=255)
                                                                                                                                 cATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATc                                                                                                                                                                                                            <  1:1010983/224‑1 (MQ=255)
                                                                                                                                       tcatGATAATTGCAAAATTATTGCCATCGACGACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                     <  1:1442093/289‑1 (MQ=255)
                                                                                                                                           gATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTg                                                                                                                                                                                  <  1:201760/240‑1 (MQ=255)
                                                                                                                                           gATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTg                                                                                                                                                                                  >  2:201760/1‑240 (MQ=255)
                                                                                                                                                ttGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATCTTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAgcg                                                                                                                                                                                                                                      <  2:738089/183‑1 (MQ=255)
                                                                                                                                                ttGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAgcg                                                                                                                                                                                                                                      >  1:738089/1‑183 (MQ=255)
                                                                                                                                                ttGCAAAATTATTGACATAGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTTCCGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGTTATAGCCATTGAAAACGCATCCATGTTG‑ATTCTGAATTTTATCCTGCAATTCCTGGAACCTTCCGATCGCCAGGCGTTACTGGCTAAAATTTATCAAGGGCCGAACCCCGGCGGCGCGCCGGTTCTTTCGGAAAAATCCAGTTTCGAACATGCCAAAGTTGGTGAACtgttgt                                                                                                                              >  2:1715475/1‑287 (MQ=255)
                                                                                                                                                           ttGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                 <  1:389213/289‑1 (MQ=255)
                                                                                                                                                           ttGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                 <  1:1759926/289‑1 (MQ=255)
                                                                                                                                                           ttGCCATCCACGACTCCCGGGCGATGAGTGAACGCTGCCGTCGACATATTGACGCCTATAAAGCCCCTGCGCCAGTAGACGTCATTGAATGTGATATTCGCGATATCGCCATTGAGAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                 <  2:2449761/289‑1 (MQ=255)
                                                                                                                                                            gtccATCGACACCCCCCGCGCGATTATTGGACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcaccac                                                                                                                <  2:1259410/287‑1 (MQ=255)
                                                                                                                                                                        cTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGaa                                                                                                                                                       >  2:774537/1‑238 (MQ=255)
                                                                                                                                                                           cccGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGcc                                                                                                 <  2:892215/289‑1 (MQ=255)
                                                                                                                                                                             cGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGaa                                                                                                                                     <  2:1882859/251‑1 (MQ=255)
                                                                                                                                                                             cGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCaa                                                                                               <  1:1235763/289‑1 (MQ=255)
                                                                                                                                                                             cGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCaa                                                                                               <  1:1153589/289‑1 (MQ=255)
                                                                                                                                                                              ggCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACATCGACTTAAAACGTCCCAAc                                                                                              >  2:105686/1‑289 (MQ=255)
                                                                                                                                                                                     atagacagCTGCCGTCGTCTTAGTGACGCCTATAAATCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACa                                                                                       <  2:1585423/282‑1 (MQ=255)
                                                                                                                                                                                     atTGAACGCTGCCGTCGTCATATTGACGCCTATACAGCCCCTACGCCAGTAGACGTCATTGAAGGTTATATTCGCGATATCGCCATTGAAAACGCATCGATCGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGAACCACGACTTTAAACGTTCCAACGGTTACa                                                                                       <  1:1715475/289‑1 (MQ=255)
                                                                                                                                                                                      ttGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAg                                                                                      <  1:264762/289‑1 (MQ=255)
                                                                                                                                                                                              tGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTgg                                                                              >  2:2280309/1‑289 (MQ=255)
                                                                                                                                                                                               gCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGga                                                                             >  2:2422583/1‑289 (MQ=255)
                                                                                                                                                                                               gCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGga                                                                             >  2:1825228/1‑289 (MQ=255)
                                                                                                                                                                                                         tatTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTTAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAg                                                                   <  1:1728817/289‑1 (MQ=255)
                                                                                                                                                                                                              aCGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgc                                                               >  1:1142792/1‑288 (MQ=255)
                                                                                                                                                                                                              aCGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgc                                                               >  1:1628077/1‑288 (MQ=255)
                                                                                                                                                                                                              aCGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgc                                                               >  2:847884/1‑288 (MQ=255)
                                                                                                                                                                                                              aCGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgc                                                               >  1:1875346/1‑288 (MQ=255)
                                                                                                                                                                                                                gcatataCAGCCGCTACGCAATTAGACGTCATGTAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                            <  2:2672423/286‑1 (MQ=255)
                                                                                                                                                                                                                gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTTGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                            >  1:1605438/1‑289 (MQ=255)
                                                                                                                                                                                                                gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCgca                                                            <  1:2402916/289‑1 (MQ=255)
                                                                                                                                                                                                                gCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACATTAAACGGGCAAACGGGTACATGGAACTGGCACTAAGCAAGAAACgca                                                            >  2:1183468/1‑289 (MQ=255)
                                                                                                                                                                                                                    ataAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCAt                                                        <  1:583393/289‑1 (MQ=255)
                                                                                                                                                                                                                     taAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGcc                                                                                                                                                 <  1:108634/199‑1 (MQ=255)
                                                                                                                                                                                                                     taAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGcc                                                                                                                                                 >  2:108634/1‑199 (MQ=255)
                                                                                                                                                                                                                            ccTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGaaa                                                >  1:524631/1‑289 (MQ=255)
                                                                                                                                                                                                                             cTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGcc                                                                                                 <  2:476973/239‑1 (MQ=255)
                                                                                                                                                                                                                             cTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGcc                                                                                                 >  1:476973/1‑239 (MQ=255)
                                                                                                                                                                                                                              tACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAAc                                              >  1:80285/1‑289 (MQ=255)
                                                                                                                                                                                                                               aCGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACg                                             <  1:889448/289‑1 (MQ=255)
                                                                                                                                                                                                                               aCGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACg                                             >  1:554858/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAg                                                                   <  1:1266874/261‑1 (MQ=255)
                                                                                                                                                                                                                                     gTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAg                                                                   >  2:1266874/1‑261 (MQ=255)
                                                                                                                                                                                                                                      tAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGATATCAGCAAGAAGCGCAGCATGCTGGAAAAGGTGAt                                         >  2:383160/1‑286 (MQ=255)
                                                                                                                                                                                                                                      tAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAAATCAGCCAGAAGCCAAGCATGCTGGAAAACGTGAAGcg                                      >  2:2608199/1‑288 (MQ=255)
                                                                                                                                                                                                                                      tAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCAAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATAAGCAAGAAGTGCAGCATGCTGGAAAACGTGAt                                         >  2:2410335/1‑286 (MQ=255)
                                                                                                                                                                                                                                       aGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATg                                        <  1:837197/286‑1 (MQ=255)
                                                                                                                                                                                                                                       aGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCt                                      <  1:1591479/288‑1 (MQ=255)
                                                                                                                                                                                                                                          cGTCCTTGAAGGTGATATTCGGGATATCGCCATTGGAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGAc                                   <  2:1854870/288‑1 (MQ=255)
                                                                                                                                                                                                                                           gTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                 >  2:534321/1‑209 (MQ=255)
                                                                                                                                                                                                                                           gTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCg                                 >  1:132154/1‑289 (MQ=255)
                                                                                                                                                                                                                                           gTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCACGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGTAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCg                                 >  1:279620/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgcg                                                              >  1:623156/1‑258 (MQ=255)
                                                                                                                                                                                                                                             cATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGAc                                   >  1:250244/1‑285 (MQ=255)
                                                                                                                                                                                                                                              aTTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGAtt                              <  1:1825228/289‑1 (MQ=255)
                                                                                                                                                                                                                                               ttGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAgcg                                                              >  1:2586973/1‑256 (MQ=255)
                                                                                                                                                                                                                                                tGAAGGTGATATTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTcc                            >  1:1404916/1‑289 (MQ=255)
                                                                                                                                                                                                                                                        atatTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACa                                                                                       <  2:757882/222‑1 (MQ=255)
                                                                                                                                                                                                                                                        atatTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACa                                                                                       >  1:757882/1‑222 (MQ=255)
                                                                                                                                                                                                                                                        atatTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTCTAACCGTGCCAACGGTTACAGCGAACTGGAGCTCAGCAAGAAGCGCAGCATGATGAACATAGTGATGACGATCGATGCCGGTGaaa                     >  2:62400/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          atTCGCGATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAAccc                  >  1:2194085/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cgcgATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGcacca                                                                                                                 >  1:1839177/1‑191 (MQ=255)
                                                                                                                                                                                                                                                             cgcgATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATa               <  1:988170/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cgATATCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACAGATTCCGTGCAAACCCATaaa             >  2:2637935/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  tatCGCCATTGAAAACGCATCGATTGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGc           >  1:1670415/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   atCGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAg            >  2:1592483/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                     cGCCATTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGc       <  2:1475078/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aTTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTgttgtt                                                                                                                             >  1:1365730/1‑167 (MQ=255)
                                                                                                                                                                                                                                                                         aTTGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTgttgtt                                                                                                                             <  2:1365730/167‑1 (MQ=255)
                                                                                                                                                                                                                                                                          ttGAAAACGCATCGATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTTCGGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCa  >  2:455603/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
TCCGTACCCGGCTATTCCAATATTATTTCCATGATTGGTATGTTAGCCGAGCGCTTCGTTC‑AACCTGGTACGCAGGTTTACGATCTGGGTTGTTCTCTGGGCGCGGCGACGCTCAGCGTGCGTCGCAACATTCATCATGATAATTGCAAAATTATTGCCATCGACAACTCCCCGGCGATGATTGAACGCTGCCGTCGTCATATTGACGCCTATAAAGCCCCTACGCCAGTAGACGTCATTGAAGGTGATATTCGCGATATCGCCATTGAAAACGCAAGCATGGTG‑GTGCTGAATTTTACCCTGCAATTCCTGGAACCTTCCGAGCGCCAGGCGTTACTGGATAAAATTTATCAAGGGCTGAACCCCGGCGGCGCGCTGGTGCTTAGCGAAAAATTCAGTTTCGAAGATGCCAAAGTTGGTGAACTGTTGTTCAACATGCACCACGACTTTAAACGTGCCAACGGTTACAGCGAACTGGAGATCAGCCAGAAGCGCAGCATGCTGGAAAACGTGATGCTGACCGATTCCGTGGAAACCCATAAAGCACGCCTGCA  >  CP042583/1633552‑1634105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A