Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,634,772 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,634,7720AT99.5% 943.9 / NA 394intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (204/187);  minor base G (0/2);  total (205/189)
Fisher's exact test for biased strand distribution p-value = 2.31e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,634,7730GC99.5% 940.6 / NA 394intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (204/188);  minor base T (1/1);  total (205/189)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,634,7740CG99.8% 938.3 / NA 394intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (204/189);  total (205/189)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 394 total aligned reads displayed.

CGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTAGCATGGGCGTGCTTTACCATCGCCGTAGTCCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAATGG  >  CP042583/1634492‑1635053
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
  aTACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGt                                                                                                                                                                                                                                                                                 >  1:550381/1‑289 (MQ=255)
         aTGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTAc                                                                                                                                                                                                                                                                          <  1:1062577/289‑1 (MQ=255)
         aTGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTAc                                                                                                                                                                                                                                                                          <  2:420337/289‑1 (MQ=255)
             cGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATc                                                                                                                                                                                                                                                                      >  1:248742/1‑289 (MQ=255)
              gTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCg                                                                                                                                                                                                                                                                     <  2:1550553/289‑1 (MQ=255)
               ttCCGACTGGAAATGGGATCGTGTTGTGCCAGATCTTTCTGATTTAACCGGACGCACAATTCTGGATGTCGGCTGCGGCAGCGGTTATCACGTGTGGGGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCATACGCGACTGTTTGTGTGCCAGTTTGAAGCGGTGCGTAAACGACTGGGTAAGGATCAGCGCGCTGATTGGTTACCGTTAGGTATGGAACAACTTCCTGCACCTAAAGTCTGTTATACAGTCTTTCCGAGTGGCTTTCTTTACCATca                                                                                                                                                                                                                                                                     >  2:1062738/1‑287 (MQ=255)
                             gggATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGa                                                                                                                                                                                                                                                      <  1:19088/289‑1 (MQ=255)
                             gggATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGa                                                                                                                                                                                                                                                      <  1:2591546/289‑1 (MQ=255)
                             gggATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGa                                                                                                                                                                                                                                                      <  1:448561/289‑1 (MQ=255)
                                aTCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCCCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCa                                                                                                                                                                                                                                                   >  1:1695926/1‑289 (MQ=255)
                                   gtgtTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGtt                                                                                                                                                                                                                                                                >  2:908368/1‑272 (MQ=255)
                                       tCTGCCCCATCTTTCTGATTTAACCGGACACACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCTACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTCTCATCGCCGTTCACCGCTGGAGCATCTATg                                                                                                                                                                                                                                             >  1:344216/1‑288 (MQ=255)
                                         tGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGttcaccg                                                                                                                                                                                                                                                           >  1:1833484/1‑266 (MQ=255)
                                           ccccATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGt                                                                                                                                                                                                                                        >  1:638909/1‑289 (MQ=255)
                                            cccgtctgtagcaTTTAACCGGACGCACCATTCTGGATGGCGGCTGCGGCAGAGGTTATCACAGGTGGGGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGtt                                                                                                                                                                                                                                       <  2:1845799/277‑1 (MQ=255)
                                                          ttAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTgg                                                                                                                                                                                                                         >  1:2290162/1‑289 (MQ=255)
                                                                         aTTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAAc                                                                                                                                                                                                          <  1:1023351/289‑1 (MQ=255)
                                                                         aTTCAGGAGCTCGGCGGCTGCAGTGGTTATAACATGTGGAGAATGATGGGTGAAGTGGCGAAGCGTGCGGTGGGGATCGACCCTAGGCAATTGTTGCTGTGCTAGTTTGAAGCGGTGAGTAAACTACTGGGTAATGATCAGCGCTCGCATTTGTTACCGTTAGTTATTGAACATCTTCCGGCACTGAAAGTCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAAc                                                                                                                                                                                                          <  2:1809640/289‑1 (MQ=255)
                                                                               gATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCaa                                                                                                                                                                                                                             <  2:1405624/264‑1 (MQ=255)
                                                                                aTGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGttca                                                                                                                                                                                                                                                              >  1:1591676/1‑227 (MQ=255)
                                                                                  gTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTgg                                                                                                                                                                                                 >  1:2714712/1‑289 (MQ=255)
                                                                                  gTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTgg                                                                                                                                                                                                 >  1:2259988/1‑289 (MQ=255)
                                                                                   gtggataagggacgggTTATCACATGGGGCGCATGATTGGGGCAGGGGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGa                                                                                                                                                                                                <  2:2612397/275‑1 (MQ=255)
                                                                                    cGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCTCTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGACAGCTCAACTGGTCAATGAAGGTGAATTGGCGTTGGaa                                                                                                                                                                                               >  2:305113/1‑289 (MQ=255)
                                                                                        tGCGGCAGAGGTTATCACCGGTGGCCTATGATTGGCGCAGGCGCGCCGCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCTCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACg                                                                                                                                                                                            <  2:66098/288‑1 (MQ=255)
                                                                                                      tCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGt                                                                                                                                                                             <  1:2381932/289‑1 (MQ=255)
                                                                                                                 gcATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  1:985746/289‑1 (MQ=255)
                                                                                                                  cATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  2:2711670/288‑1 (MQ=255)
                                                                                                                               ggCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCa                                                                                                                                                     <  2:550381/288‑1 (MQ=255)
                                                                                                                                gcgcgcACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGAt                                                                                                                                                                                                                                <  1:2186026/212‑1 (MQ=255)
                                                                                                                                gcgcgcACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGAt                                                                                                                                                                                                                                >  2:2186026/1‑212 (MQ=255)
                                                                                                                                     cACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATc                                                                                                                                              >  1:1523818/1‑289 (MQ=255)
                                                                                                                                          cgcgGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGt                                                                                                                                                                                                                        <  1:1464870/210‑1 (MQ=255)
                                                                                                                                          cgcgGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGt                                                                                                                                                                             <  1:111461/253‑1 (MQ=255)
                                                                                                                                          cgcgGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTAc                                                                                                                                         >  1:2233345/1‑289 (MQ=255)
                                                                                                                                          cgcgGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGATGATGAGAACACGGTGCTGGTACCAGGCGATCGTTAc                                                                                                                                         >  1:2331232/1‑289 (MQ=255)
                                                                                                                                          cgcgGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGGTATTGATGGTGATGAGAAGACGGTGGCGGTAACGGGCGCTCGTTat                                                                                                                                         >  2:2311193/1‑288 (MQ=255)
                                                                                                                                              gTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGc                                                                                                                                                                                                                                           <  2:2356574/187‑1 (MQ=255)
                                                                                                                                                ggggATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCa                                                                                                                                    <  2:1977959/288‑1 (MQ=255)
                                                                                                                                                  ggATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAAt                                                                                                                                 >  2:373898/1‑289 (MQ=255)
                                                                                                                                                  ggATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAAt                                                                                                                                 >  1:2422882/1‑289 (MQ=255)
                                                                                                                                                    aTCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  1:396911/254‑1 (MQ=255)
                                                                                                                                                       gACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTa                                                                                                                            <  2:2422882/289‑1 (MQ=255)
                                                                                                                                                       gACCCGACGCAACTGTTTCGGGGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTa                                                                                                                            <  2:1014956/289‑1 (MQ=255)
                                                                                                                                                         cccTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  2:1272916/249‑1 (MQ=255)
                                                                                                                                                           cTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACg                                                                                                                                                                                            <  2:2513013/221‑1 (MQ=255)
                                                                                                                                                           cTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACg                                                                                                                                                                                            >  1:2513013/1‑221 (MQ=255)
                                                                                                                                                           cTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGt                                                                                                                        <  1:917993/289‑1 (MQ=255)
                                                                                                                                                            tACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  1:722275/246‑1 (MQ=255)
                                                                                                                                                            tACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  >  2:722275/1‑246 (MQ=255)
                                                                                                                                                               gCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTAt                                                                                                                    <  1:1781206/289‑1 (MQ=255)
                                                                                                                                                                   cTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAgg                                                                                                                                                                                                               <  2:1585919/194‑1 (MQ=255)
                                                                                                                                                                   cTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACg                                                                                                                                                                                            >  1:126791/1‑213 (MQ=255)
                                                                                                                                                                   cTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCa                                                                                                                >  2:123803/1‑289 (MQ=255)
                                                                                                                                                                    tGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTAGTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCAt                                                                                                               <  1:1661694/289‑1 (MQ=255)
                                                                                                                                                                    ggttttggtgCCGGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCATCTCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCAt                                                                                                               <  2:1364673/282‑1 (MQ=255)
                                                                                                                                                                      tttCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  2:1101346/236‑1 (MQ=255)
                                                                                                                                                                        tCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTa                                                                                                                            >  1:1009227/1‑272 (MQ=255)
                                                                                                                                                                          tgtgCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTc                                                                                                         <  1:1406378/289‑1 (MQ=255)
                                                                                                                                                                                             gCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGaaaaa                                                                                       <  2:1523818/288‑1 (MQ=255)
                                                                                                                                                                                              cGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGa                                                                                                                                                                                                                                                      <  1:1396084/128‑1 (MQ=255)
                                                                                                                                                                                              cGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  >  1:2045759/1‑212 (MQ=255)
                                                                                                                                                                                                      cctGGGTAATGATCAGCGCGCGCATTTGTTACCTTTAGGTATTTAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTgaag                                                                             <  2:743711/288‑1 (MQ=255)
                                                                                                                                                                                                      actGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGc                                                                                                                                                                                                                                                    >  1:2648071/1‑122 (MQ=255)
                                                                                                                                                                                                      actGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATg                                                                                                                                                                                                                   <  2:2262120/155‑1 (MQ=255)
                                                                                                                                                                                                        tGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAaca                                                                                                                                                                   >  1:1071075/1‑201 (MQ=255)
                                                                                                                                                                                                        tGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCgcgctggcg                                                                                               >  1:899008/1‑269 (MQ=255)
                                                                                                                                                                                                        tGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTgaagaa                                                                           >  1:2550521/1‑289 (MQ=255)
                                                                                                                                                                                                          ggTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAATACTGGCTGAAGAAgt                                                                         >  1:2130620/1‑289 (MQ=255)
                                                                                                                                                                                                            tAATGATCAGGCCGCGCATTTGTTTCCGTTAGGTATTGCAGAACTGCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTAAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAAAACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAgtg                                                                        <  1:1492463/288‑1 (MQ=255)
                                                                                                                                                                                                            caaTGAGCAGCGCGGGCATTTTTTACCTGTGGGATTTGAACAATTTCCGGCGATGAAAGCCTTTGATCCCGTCTTTTCGATGGGCGTGCGTTACCATCGCCGTTCACCGCTGGAGCATATATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAgtg                                                                        <  2:97200/287‑1 (MQ=255)
                                                                                                                                                                                                              aTGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTgg                                                                     >  1:770397/1‑289 (MQ=255)
                                                                                                                                                                                                               tGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGt                                                                    >  2:114958/1‑289 (MQ=255)
                                                                                                                                                                                                               tGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGt                                                                    >  1:1203392/1‑289 (MQ=255)
                                                                                                                                                                                                                    aGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCa                                                                                                                                                                                                                                          >  2:784483/1‑118 (MQ=255)
                                                                                                                                                                                                                    aGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCa                                                                                                                                                                                                                                          <  1:784483/118‑1 (MQ=255)
                                                                                                                                                                                                                    aGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTa                                                                                                                                          >  1:2536494/1‑214 (MQ=255)
                                                                                                                                                                                                                    aGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTa                                                                                                                                          <  2:2536494/214‑1 (MQ=255)
                                                                                                                                                                                                                      cgcgcgcATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  <  2:212447/188‑1 (MQ=255)
                                                                                                                                                                                                                      cgcgcgcATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGAGTAATGTCTATTTCATCCCTTCTGCGCCGGCGCTGAAAAACGGGCTGACTAGTTGTGGGTTTGTAg                                                             >  2:1453252/1‑289 (MQ=255)
                                                                                                                                                                                                                                       gTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGtt                                                                                                                                                                                                                                       <  2:2489889/102‑1 (MQ=255)
                                                                                                                                                                                                                                       gTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGAt                                            >  1:572264/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ttgtgTATTGAACTACTGCCGGCACTGGAAGGCTTTGTTACCGACGTTGCGATGGGCGTGCTTTACCATCGCCGTTAACGGCTGGAGTATATATGGCAAGTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCATGCGATCGTTTCGCGCAAATGCGTAATGTCTATTTGCTACCATCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTATTGTAGATATCCGCATTGCGGAtg                                           <  2:1695926/285‑1 (MQ=255)
                                                                                                                                                                                                                                        ttAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGAtg                                           <  2:869249/289‑1 (MQ=255)
                                                                                                                                                                                                                                         ttggTATTGAACAACTTCCGGGACTGAGAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGAtg                                           <  2:1628193/286‑1 (MQ=255)
                                                                                                                                                                                                                                         tAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGGGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGAtgt                                          >  2:2013697/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTa                                                                                                                            >  2:2237305/1‑201 (MQ=255)
                                                                                                                                                                                                                                                tGAACAACTTCCGGCACTGAAAGCCTTTGAGACCGTCTTTTCGATGTGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGAGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGtt                                   <  2:349021/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aacaacTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCTCTGGCGCTGAACAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCTTTa                                  >  2:2567043/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  aacaacTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTa                                  >  1:502702/1‑288 (MQ=255)
                                                                                                                                                                                                                                                  aacaacTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTa                                  >  1:2004038/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   acaacTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTac                                 <  1:2602084/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      acTTCCGGCACTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGTTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTaccac                              >  1:1290801/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               aCTGAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAagag                    <  1:114958/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gAAAGCCTTTGATACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAacac                                                                                                                                                                  >  2:2597315/1‑144 (MQ=255)
                                                                                                                                                                                                                                                                             aTACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTGTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGa      >  1:478791/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              tACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGaa     <  1:155354/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tACCGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGaa     <  2:176624/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 cGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAatgg  >  1:31579/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 cGTCTTTTCGATGGGCGTGCTTTACCATCGCCGTTCACCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAatgg  >  1:853923/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
CGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTATCACATGTGGCGCATGATTGGCGCAGGCGCGCACCTCGCGGTGGGGATCGACCCTACGCAACTGTTTCTGTGCCAGTTTGAAGCGGTGCGTAAACTACTGGGTAATGATCAGCGCGCGCATTTGTTACCGTTAGGTATTGAACAACTTCCGGCACTGAAAGCCTTTGATACCGTCTTTAGCATGGGCGTGCTTTACCATCGCCGTAGTCCGCTGGAGCATCTATGGCAGTTGAAAGATCAACTGGTCAATGAAGGTGAACTGGTGCTGGAAACGCTGGTTATTGATGGTGATGAGAACACGGTGCTGGTACCAGGCGATCGTTACGCGCAAATGCGTAATGTCTATTTCATCCCTTCCGCGCTGGCGCTGAAAAACTGGCTGAAGAAGTGTGGTTTTGTAGATATCCGCATTGCGGATGTGAGCGTTACCACCACAGAAGAGCAGCGACGCACCGAATGG  >  CP042583/1634492‑1635053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A