Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,644,406 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,644,4060GC99.1% 769.5 / NA 327intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/2);  new base C (162/161);  total (163/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,644,4070CG99.7% 770.4 / NA 327intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (162/162);  total (163/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,644,4080TA98.5% 768.9 / NA 327intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (161/160);  minor base C (2/3);  total (163/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 327 total aligned reads displayed.

GGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCTTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGGCTCATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCGCTCGTTAACTCGTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTT  >  CP042583/1644129‑1644683
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                   
ggTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGCCGTTAACTc                                                                                                                                                                                                                                                                            >  1:45575/1‑289 (MQ=255)
ggTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAAcc                                                                                                                                                                                                                                                                             >  2:2480850/1‑287 (MQ=255)
 gTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCg                                                                                                                                                                                                                                                                           >  2:416215/1‑289 (MQ=255)
 gTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCg                                                                                                                                                                                                                                                                           >  2:2695337/1‑289 (MQ=255)
      tgtgCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTg                                                                                                                                                                                                                                                                       <  1:2480850/288‑1 (MQ=255)
      tgtgCTGTTAGTTCCACTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTg                                                                                                                                                                                                                                                                       >  1:271582/1‑288 (MQ=255)
                     aCTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAAtt                                                                                                                                                                                                                                                        >  2:475781/1‑288 (MQ=255)
                     aCTTACGGGAGATTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACCCGTTTGCCGCTCCCGCAAAttc                                                                                                                                                                                                                                                       >  1:2526408/1‑288 (MQ=255)
                               gaTTAACCGCTCCTACGAAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTACGTCGCTAATGAAGCACTCCTGCCAGTGGCGAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATCACGGGAAATACGTTCCGCCAGCCAAATACTCAATGCACGACTCAGCGCAGCAGCAACTTCCTCACGAGCGAAGGGGTTAACAATTAACCCGCACGTTAACTCTCTCGCCGCTCCCGCAAACTgcgaaagacca                                                                                                                                                                                                                                             >  2:2176855/1‑279 (MQ=255)
                                                 aaGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           <  1:2584272/289‑1 (MQ=255)
                                                 aaGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           <  1:2695337/289‑1 (MQ=255)
                                                 aaGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           <  2:2568839/289‑1 (MQ=255)
                                                   gCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTgg                                                                                                                                                                                                                         >  2:1123666/1‑289 (MQ=255)
                                                          aaaGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTg                                                                                                                                                                                                                   <  1:848047/288‑1 (MQ=255)
                                                             ggTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGagca                                                                                                                                                                                                               >  2:1592280/1‑289 (MQ=255)
                                                                 gCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           <  2:1868136/273‑1 (MQ=255)
                                                                        tATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGagca                                                                                                                                                                                                               >  2:388675/1‑278 (MQ=255)
                                                                        tATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGagca                                                                                                                                                                                                               <  1:388675/278‑1 (MQ=255)
                                                                         aTCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATActct                                                                                                                                                                                                   >  2:2708880/1‑289 (MQ=255)
                                                                                 gctgGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTAc                                                                                                                                                                                           <  1:1543268/289‑1 (MQ=255)
                                                                                   tgGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCa                                                                                                                                                                                         <  1:46944/289‑1 (MQ=255)
                                                                                         tCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAAGGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCa                                                                                                                                                                                   <  1:953506/289‑1 (MQ=255)
                                                                                          ccGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           >  2:2725611/1‑248 (MQ=255)
                                                                                              gcTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCg                                                                                                                                                                              <  1:2138654/289‑1 (MQ=255)
                                                                                                ttCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTc                                                                                                                                                                            <  1:1303842/289‑1 (MQ=255)
                                                                                                       aaCTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAg                                                                                                                                                                      <  1:439192/288‑1 (MQ=255)
                                                                                                          tATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGAt                                                                                                                                                                                                                                >  2:812880/1‑227 (MQ=255)
                                                                                                          tATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGc                                                                                                                                                                  <  1:1228334/289‑1 (MQ=255)
                                                                                                            tCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGGCGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGTGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTAc                                                                                                                                                                                           <  1:1400472/262‑1 (MQ=255)
                                                                                                            tCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATcc                                                                                                                                                                                >  1:2421971/1‑273 (MQ=255)
                                                                                                             cTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTc                                                                                                                                                               >  2:761415/1‑289 (MQ=255)
                                                                                                                 tttAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTc                                                                                                                                                                            <  1:1731790/272‑1 (MQ=255)
                                                                                                                        cGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCa                                                                                                                                                     <  1:1897800/288‑1 (MQ=255)
                                                                                                                          cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTGCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGag                                                                                                                                                                                                                 >  2:684140/1‑226 (MQ=255)
                                                                                                                          cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACg                                                                                                                                                   >  1:1095221/1‑288 (MQ=255)
                                                                                                                          cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACg                                                                                                                                                   >  1:565954/1‑288 (MQ=255)
                                                                                                                           ttaTGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGt                                                                                                                                                  <  1:2074084/286‑1 (MQ=255)
                                                                                                                            aaTGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCa                                                                                                                                                <  1:246712/289‑1 (MQ=255)
                                                                                                                                aaGCACTCCTGACAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGACAACGTCAGAGt                                                                                                                                            >  1:2738273/1‑289 (MQ=255)
                                                                                                                                      tcccgacactgtatAATATCGTTTTTCACGAAAACGTCCAGCATTTCTGCATGCGGGGAAATACATTCCGCCAGCGACATAGGCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGa                                                                                                                                      <  2:45575/276‑1 (MQ=255)
                                                                                                                                               tGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGcc                                                                                                                                                       <  1:1020431/263‑1 (MQ=255)
                                                                                                                                                ggTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGc                                                                                                                                                                  >  1:862234/1‑251 (MQ=255)
                                                                                                                                                ggTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCTTCACTAAGACCACGTACGAGTAGCGGAATATTTtca                                                                                                                             >  2:352532/1‑288 (MQ=255)
                                                                                                                                                  ttAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGagc                                                                                                                                                                                                                >  1:879538/1‑203 (MQ=255)
                                                                                                                                                  ttAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGcc                                                                                                                                                       >  2:1345630/1‑260 (MQ=255)
                                                                                                                                                  ttAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTtcatca                                                                                                                          >  1:2297656/1‑289 (MQ=255)
                                                                                                                                                           tttttaccgttacagTCCCGCATTTATGCAGAACGCGAAATACGTTCCGCCAGCGAAATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTAc                                                                                                                 <  2:2595893/275‑1 (MQ=255)
                                                                                                                                                           tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGCGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCACTGGCGTCACTAAGCCCCCGTCAGAGTCGCGTCCTATTTTCCTCCGGAAtttc                                                                                                                  >  2:2161604/1‑287 (MQ=255)
                                                                                                                                                           tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGc                                                                                                                                                                  <  1:119988/240‑1 (MQ=255)
                                                                                                                                                           tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGc                                                                                                                                                                  >  2:119988/1‑240 (MQ=255)
                                                                                                                                                           tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACt                                                                                                                                                            <  1:1163355/246‑1 (MQ=255)
                                                                                                                                                           tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGcc                                                                                                                                                       >  2:864086/1‑251 (MQ=255)
                                                                                                                                                            ttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTAc                                                                                                                 <  1:683578/288‑1 (MQ=255)
                                                                                                                                                                cACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTAc                                                                                                                                                                                           >  1:1921644/1‑210 (MQ=255)
                                                                                                                                                                cACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCCGAGTACCGGAATCTTTTCATCAGTAATTTACGGTCa                                                                                                            >  2:1989830/1‑289 (MQ=255)
                                                                                                                                                                   gATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCaaaa                                                                                                         >  1:2595893/1‑289 (MQ=255)
                                                                                                                                                                           ccAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTgcga                                                                                                                                                                                                                                                    <  2:1748649/142‑4 (MQ=255)
                                                                                                                                                                                aTTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCa                                                                                               <  1:2674095/286‑1 (MQ=255)
                                                                                                                                                                                   tCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGAt                                                                                                  <  1:1962333/280‑1 (MQ=255)
                                                                                                                                                                                    cTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGTTCAACATGCTGATTCAAataata                                                                                        >  2:1223441/1‑289 (MQ=255)
                                                                                                                                                                                         tGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcg                                                                                   <  1:1592280/289‑1 (MQ=255)
                                                                                                                                                                                         tGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcg                                                                                   <  1:994684/289‑1 (MQ=255)
                                                                                                                                                                                         tGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcg                                                                                   >  1:771175/1‑289 (MQ=255)
                                                                                                                                                                                                      gTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAg                                                                                     <  1:66083/274‑1 (MQ=255)
                                                                                                                                                                                                       ttCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCa                                                                                               >  1:1792134/1‑263 (MQ=255)
                                                                                                                                                                                                       ttCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCAACGTCAGAGGCGCGGTATATTTTCATCAGTAATTTACGGTCAAATTGCTGATTCAAATATTAAAGCGGTGTCAAGCCCAAt                                                                     >  2:1813186/1‑289 (MQ=255)
                                                                                                                                                                                                                            tGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAAtt                                                >  2:1255072/1‑289 (MQ=255)
                                                                                                                                                                                                                                  aTCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTTACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCa                                          >  2:288751/1‑289 (MQ=255)
                                                                                                                                                                                                                                  aTCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCaa                                                                                                           >  2:660037/1‑224 (MQ=255)
                                                                                                                                                                                                                                  aTCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCa                                          >  2:2183575/1‑289 (MQ=255)
                                                                                                                                                                                                                                        cgcAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCa                                    >  2:737367/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                           >  2:2109704/1‑101 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAgcagca                                                                                                                                                                                                            <  1:2169728/116‑1 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTAc                                                                                                                                                                                           <  2:2355244/133‑1 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTcc                                                                             <  1:1167760/243‑1 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCAtttt                                >  2:2057908/1‑288 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCAttt                                 >  2:893202/1‑287 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCAttt                                 >  2:1055627/1‑287 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                               >  1:187326/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                               >  1:807049/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                               >  1:64026/1‑289 (MQ=255)
                                                                                                                                                                                                                                             cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGATGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCAtttt                                >  1:1063046/1‑288 (MQ=255)
                                                                                                                                                                                                                                               gCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGa                             >  2:529573/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       gTCACGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAGATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCtgaca                      >  2:1651999/1‑286 (MQ=255)
                                                                                                                                                                                                                                                          aCGATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGa                  <  1:2352701/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            gATCGTAGGGGTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAat                <  1:2057908/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             aTCGTAGGGGTAAACAATTACCGCCGACGTTAACTCGTTGGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCGTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAat                <  2:1410200/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGa         <  1:144207/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ggTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGa         <  2:1163612/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gTTAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGcc                                                                                                                                                       >  2:144428/1‑144 (MQ=255)
                                                                                                                                                                                                                                                                       ttAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTAttt                                                          <  1:314589/236‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTg                                                                                                    >  2:2451021/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                        tAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAg      >  2:2539808/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                        tAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGc    <  1:2183575/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tAACAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGc    <  1:761415/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                        tAACAATTAACGCCGACGTTAACTCGTTTACCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGc    <  2:847863/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aaCAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcggcg                                                                                <  2:2390446/212‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aaCAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGa         <  1:136024/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                         aaCAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCCGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGc                                                                  >  2:192409/1‑226 (MQ=255)
                                                                                                                                                                                                                                                                          aCAATTAACGCCGACGTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCa                                                      <  1:738264/237‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                   
GGTCGATGTGCTGTTAGTTCCACTTACGGGAGATTAACCGCTCTTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGGCTCATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCGCTCGTTAACTCGTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCACGCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTT  >  CP042583/1644129‑1644683

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A