Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,969,492 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,969,4920GC98.6% 684.4 / NA 295intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (3/1);  new base C (148/142);  total (151/144)
Fisher's exact test for biased strand distribution p-value = 6.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,969,4930CG99.0% 675.7 / NA 295intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (147/143);  total (151/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,969,4940TA98.6% 680.4 / ‑4.8 294intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (145/142);  minor base G (2/2);  total (150/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 295 total aligned reads displayed.

TGCGCAGTCGGCTGGTTGTTACCTTCCATGCTGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGGCTGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTCCAACACCACCACCGCGTCGGC  >  CP042583/1969214‑1969773
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
tGCGCAGTCGGCTGGTTGTTACCTTCCATCGAGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AAc                                                                                                                                                                                                                                                                                  <  1:2713533/288‑1 (MQ=255)
  cgcAGTCGGCTGGTTGTTACCTTCCATCGAGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GGTTCTGCTCACGAAGACGGAATGTCGCCTCCGGCGCAGCATCTTTGATACCTGCCCGTTCCGGGATTTTCGCCACCACAGCGTCAATCACATGGTCGGGCATGC‑TCCAGTCCACTTCACGGCCCAGCGGGGCTCTGTGCATGCcgtggactcc                                                                                                                                                                                                                                                                                 >  2:2502620/1‑282 (MQ=255)
    cggtcggtggattggtACCTTCCATCGGGAAGGGGAACATGGTGTCAATAGCCGGCGGCTGACGCGGCTCATGAACGCTGATAGTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAgc                                                                                                                                                                                                                                                                              <  2:1524188/277‑1 (MQ=255)
             ggTTGTTACCTTCCATCGAGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTc                                                                                                                                                                                                                                                                    <  1:1337887/289‑1 (MQ=255)
                   tACCTTCCATCGAGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCa                                                                                                                                                                                                                                                               <  1:721829/288‑1 (MQ=255)
                   aaCCTTCCATGGAGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAGCGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCAt                                                                                                                                                                                                                                                              <  1:579718/288‑1 (MQ=255)
                        tccatcgagAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAg                                                                                                                                                                                                                                                         >  1:1148353/9‑289 (MQ=255)
                        tccatcgagAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCCTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTTCAGCGAGTCT‑AACCAGCGCCAGCATTCCAGCCTGActg                                                                                                                                                                                                                                                         >  2:1377935/9‑287 (MQ=255)
                            tcgagAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATTGTCGAGC‑TGCGTCCAATCCACTTCACGGCCCATCAGGGTGCTTGTCAGCGAGTGT‑AACCAGCGCCAGATTCCCAGCCAGACAGgttt                                                                                                                                                                                                                                                     >  1:1035854/5‑289 (MQ=255)
                                 aaGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTg                                                                                                                                                                                                                                                 <  1:915862/288‑1 (MQ=255)
                                 aaGGGGAACTAGGGGTCAATATCCGCGGGCGGCAGCGGCTCATGAACGGTGTTATTGGCGCGAATGGCGGGACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTg                                                                                                                                                                                                                                                 <  2:2038893/288‑1 (MQ=255)
                                     tGAACATCGTCTCTATACCATGCGGCTGGCGCGGCTCATGAACTCGTATATTGGAGCGCATGTCGGTACGCACGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGta                                                                                                                                                                                                                                            <  2:1035854/289‑1 (MQ=255)
                                        aCATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGtaata                                                                                                                                                                                                                                         <  2:2269464/289‑1 (MQ=255)
                                              tgtCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCCCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTACTATGCCgg                                                                                                                                                                                                                                   >  2:1300968/1‑289 (MQ=255)
                                                        cTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTaaa                                                                                                                                                                                                                           >  1:600246/1‑287 (MQ=255)
                                                         tGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCa                                                                                                                                                                                                                                     >  2:697997/1‑276 (MQ=255)
                                                          gCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGta                                                                                                                                                                                                                                            >  2:1889766/1‑268 (MQ=255)
                                                          gCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGta                                                                                                                                                                                                                                            <  1:1889766/268‑1 (MQ=255)
                                                          gCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTg                                                                                                                                                                                                                       >  1:923077/1‑289 (MQ=255)
                                                          gCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTg                                                                                                                                                                                                                       >  1:870419/1‑289 (MQ=255)
                                                          gCGGCAGACGCGGCTCATAAACGCTGATATTGGCACGCATGGCGGTACGACCGCTGTAACGGTGCGGTACACGGGCCA‑GTTTCTGCCCACGAATACGGACTGTCACAGCCGGCGCCGCGTCCTTGATACCTGTCAGTTCCTGGATTTTCGCCACAAAAGCGTCAATCAGCTGGTCGCGC‑TTCGTCCATACCACTTCACTGCGCAGCTGGGTGATGGGCAGCGAGAGT‑AAACAGCGCACGATTTCCAACAGTACACTTTTGCTGTCGTACTACGCAgaaaccaaaagtca                                                                                                                                                                                                                       >  2:2726230/1‑276 (MQ=255)
                                                            ggCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGga                                                                                                                                                                                                                     >  1:2199303/1‑289 (MQ=255)
                                                            ggCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTACACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAg                                                                                                                                                                                                                                                         <  1:2042159/253‑1 (MQ=255)
                                                                           tGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGa                                                                                                                                                                                                                                  <  1:2122873/261‑1 (MQ=255)
                                                                           tGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGgcgc                                                                                                                                                                                                      <  1:1778448/289‑1 (MQ=255)
                                                                           tGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGgcgc                                                                                                                                                                                                      <  1:1111011/289‑1 (MQ=255)
                                                                           aaggaccagATGTTGGAGCGGATGGCGGGACGGCCGCGGTAACGGGGCGGTTCACGGGCCA‑GTTTCTGCCAACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGgcgc                                                                                                                                                                                                      <  2:962252/281‑1 (MQ=255)
                                                                                 cTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGACGAAACGTTGGGCGCGGCCt                                                                                                                                                                                                 >  1:2154406/1‑288 (MQ=255)
                                                                                            gcgcATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCgttgtt                                                                                                                                                                                         >  1:2536861/1‑285 (MQ=255)
                                                                                            gcgcATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGAt                                                                                                                                                                                      <  1:1448432/288‑1 (MQ=255)
                                                                                              gcATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCa                                                                                                                                                                                    >  1:241885/1‑288 (MQ=255)
                                                                                                            ccGCTGTAACGGTGCGGTTCACGGGCCA‑GTTCCTGCCCACGAATACGGAATGTCGCATCCGGCGCCGCATCTTTGATACCTGCCAGTTCCGGGATTATCGCCACAACAGCGTCAATGACATTGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGGGCAGCGGGTGT‑AACCAGCGACAGCTTTCCAGCATGAGAGTTTTGCTTTCGTAATACGCAGGATCGTACAACTGGAAGAAACGTTGGCCGGGGCTTTCGGGTTTGATCacctgtcccttataca                                                                                                                                                                     >  2:405308/1‑276 (MQ=255)
                                                                                                              gCTGCAACGGTGCGGTTCACGGGCCC‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGATGCTTTGATACCTGCCAGTTCCGGGATCTTCGCCACAACAGCGTCAATGACAGGGTCATGC‑TGCGCCCCGTCCACTTTTCGGCTAAGCAGCGTGCTGTGCACCGAGTGT‑AACCACCGCCACCTTTCCAGCATGACTGTTTTGCTGTCGGTATACGCAGGATCGTAAACCTGGAACAAACGTTGGGCGCTGTCGTCGTTGTTCATCACCGTACCGTCGCCTTcc                                                                                                                                                                   >  2:1922088/1‑288 (MQ=255)
                                                                                                                        tGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGta                                                                                                                                                                                                                                            >  1:555691/1‑206 (MQ=255)
                                                                                                                        tGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGta                                                                                                                                                                                                                                            <  2:555691/206‑1 (MQ=255)
                                                                                                                        tGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCa                                                                                                                                                                                    <  2:2122805/262‑1 (MQ=255)
                                                                                                                          cGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAgcgc                                                                                                                                                                                                                                                                            >  1:193381/1‑172 (MQ=255)
                                                                                                                          cGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTTCTGTCGTAATAAGCAGGATCGTAAACCTTGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTGCAGCAAAGATggga                                                                                                                                                       >  1:1606676/1‑287 (MQ=255)
                                                                                                                          cGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGgca                                                                                                                                                       >  1:225785/1‑289 (MQ=255)
                                                                                                                            ggttaCGGGGCAGGTTCCTCCCCACGAATACGAAATGTCGCATCCGGCGCGGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGgca                                                                                                                                                       <  2:2601502/284‑1 (MQ=255)
                                                                                                                               cACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGa                                                                                                                                                  <  1:409585/289‑1 (MQ=255)
                                                                                                                                  gggCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAACCGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAACGCTGGCAGCCGaaa                                                                                                                                                >  2:1620604/1‑288 (MQ=255)
                                                                                                                                  gggCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTCTCGCCCCAAGAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGCGTGCTGTGAAGCGCGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGCTTTGCCGTCGTTATAACAAGGTACGTAAACCTTGTAGAAACGTGTGGCGCGGCCCTCGTTCGGGTGCACCGTTCCGTCCCTTCCAGCCAACCTGGACGCAGAAAg                                                                                                                                               >  2:1661942/1‑289 (MQ=255)
                                                                                                                                      cA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTAc                                                                                                                                            <  1:1377935/288‑1 (MQ=255)
                                                                                                                                       a‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTg                                                                                                                                                                                                                                                    <  2:114467/183‑1 (MQ=255)
                                                                                                                                       a‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCa                                                                                                                                                                                                                                     <  1:2454764/198‑1 (MQ=255)
                                                                                                                                       a‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCa                                                                                                                                          >  1:1531896/1‑289 (MQ=255)
                                                                                                                                        cgTTTCTGCCCACGAATACGCAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGATCCGGGATTTTCGCCGCAACAGCGTCAATCACATGGTCGCGC‑TGCCTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGCGCAGCGCGTGT‑AACCAGCGCCAGCTTTCCAGCTTGACAGTTTTGCTGTCGTAATAATCAGGATCGTGACCCTGGAAGACTAGTTGTGCGCGGCCTCCGTGGTTGATCACCGTACCCTCGCTTCCTGCAACGCTGGTAGCAGAACGTCCCa                                                                                                                                          >  2:309004/2‑289 (MQ=255)
                                                                                                                                               gCCCACGAATACGGAATGTCGCATCCGACGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACATCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTg                                                                                                                                                                                                                                                 <  2:2408118/179‑1 (MQ=255)
                                                                                                                                                 ccACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGt                                                                                                                                 <  1:1704046/289‑1 (MQ=255)
                                                                                                                                                   aCGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGgtt                                                                                                                               >  1:354064/1‑289 (MQ=255)
                                                                                                                                                             aaggTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATGTTCGCCACAACAGCGTCAATCACATGGGCGAGC‑TGCGTCCAGTCCACTGCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGgca                                                                                                                                                       <  1:1667517/252‑1 (MQ=255)
                                                                                                                                                              aTGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCg                                                                                                                     <  2:2175539/288‑1 (MQ=255)
                                                                                                                                                               tGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATc                                                                                                                      >  1:1165614/1‑286 (MQ=255)
                                                                                                                                                                     aTCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGt                                                                                                             <  1:1648252/289‑1 (MQ=255)
                                                                                                                                                                     aTCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGt                                                                                                             <  2:269540/289‑1 (MQ=255)
                                                                                                                                                                         ggCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCgttgtt                                                                                                                                                                                         <  2:142017/209‑1 (MQ=255)
                                                                                                                                                                         ggCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTtgat                                                                                                         <  1:2358084/289‑1 (MQ=255)
                                                                                                                                                                                 aTCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCaa                                                                                                   <  1:2685522/287‑1 (MQ=255)
                                                                                                                                                                                 aTCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAacc                                                                                                 <  2:2686327/289‑1 (MQ=255)
                                                                                                                                                                                          aCCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGaa                                                                                                                                                 >  1:2692962/1‑232 (MQ=255)
                                                                                                                                                                                          aCCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCAcc                                                                                        >  1:1766947/1‑289 (MQ=255)
                                                                                                                                                                                              gCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGt                                                                                                             <  1:1287536/264‑1 (MQ=255)
                                                                                                                                                                                              gCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCg                                                                                    >  2:782558/1‑289 (MQ=255)
                                                                                                                                                                                              gCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCg                                                                                    >  2:333376/1‑289 (MQ=255)
                                                                                                                                                                                                             ttCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAgc                                                                      >  2:1205709/1‑288 (MQ=255)
                                                                                                                                                                                                                          cGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcgcg                                                        >  1:1985145/1‑289 (MQ=255)
                                                                                                                                                                                                                           gTCAATCCCATGGTCGAGA‑TGCGGCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcgcg                                                        <  2:2521770/288‑1 (MQ=255)
                                                                                                                                                                                                                           gTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcgcg                                                        <  1:182031/288‑1 (MQ=255)
                                                                                                                                                                                                                           gTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcg                                                          <  1:782558/286‑1 (MQ=255)
                                                                                                                                                                                                                           gTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcg                                                          <  2:600246/286‑1 (MQ=255)
                                                                                                                                                                                                                            tCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCgttgtt                                                                                                                                                                                         <  2:1735191/158‑1 (MQ=255)
                                                                                                                                                                                                                            tCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCgttgtt                                                                                                                                                                                         >  1:1735191/1‑158 (MQ=255)
                                                                                                                                                                                                                               aTCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGgcgc                                                                                                                                                                                                      >  1:2502987/1‑142 (MQ=255)
                                                                                                                                                                                                                               aTCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCg                                                                                    >  2:1803254/1‑256 (MQ=255)
                                                                                                                                                                                                                               aTCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATa                                                    >  1:701976/1‑288 (MQ=255)
                                                                                                                                                                                                                               aTCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATa                                                    >  1:1471916/1‑288 (MQ=255)
                                                                                                                                                                                                                                      ggTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGc                                            >  1:898038/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGAc                                       >  2:2066590/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGAc                                       >  1:2611547/1‑289 (MQ=255)
                                                                                                                                                                                                                                           aGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGAc                                       >  1:1401052/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  gtccagtccaCTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCa                                 <  1:1122215/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   tccagtccaCTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCt                                                                                                                   >  1:2079638/1‑206 (MQ=255)
                                                                                                                                                                                                                                                   tccagtccaCTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCt                                                                                                                   <  2:2079638/206‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCTTCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAg                                                                                      >  1:2076431/1‑227 (MQ=255)
                                                                                                                                                                                                                                                             ttCCCGGCTCAGGAGGGTGCTGTGCA‑GCGGTGTGAACCAGCGCAAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTcc                      <  2:1471916/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTcc                      <  2:245005/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttCACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATAATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTcc                      <  1:1094862/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             ttCAAGGCTGAGCAGGGTGCTGTGCAGCGAGTGT‑AACAAGCGACAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTcc                      <  2:2367584/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCa                                 <  1:644445/276‑1 (MQ=255)
                                                                                                                                                                                                                                                               cACGGCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTCCaa                    <  1:1205709/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ggCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAg                                                                                                                                                                                                                                    >  1:126200/1‑78 (MQ=255)
                                                                                                                                                                                                                                                                  ggCTCAGCAGGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAg                                                                                                                                                                                                                                    <  2:126200/78‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cagGGTGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGa                                                                                                                                                  >  1:298356/1‑153 (MQ=255)
                                                                                                                                                                                                                                                                              tGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCtt                                                                                                                                                                                                >  2:904116/1‑102 (MQ=255)
                                                                                                                                                                                                                                                                              tGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCgttgtt                                                                                                                                                                                         >  2:1999266/1‑109 (MQ=255)
                                                                                                                                                                                                                                                                              tGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCAcg                                                          >  2:1099379/1‑236 (MQ=255)
                                                                                                                                                                                                                                                                              tGCTGTGCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGGGACGATGCAGATCGTTTTCCAACACCACCACCGCGTc     >  2:853074/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 tgtgCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGTGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTCCAACACCACCACCGCGTCGgc  >  1:819750/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 tgtgCAGCGAGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTCCAACACCACCACCGCGTCgg   >  2:416935/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
TGCGCAGTCGGCTGGTTGTTACCTTCCATGCTGAAGGTGAACATGGTGTCAATATCCTGCGGCTGACGCGGCTCATGAACGCTGATATTGGCGCGCATGGCGGTACGACCGCTGTAACGGTGCGGTTCACGGGCCA‑GTTTCTGCCCACGAATACGGAATGTCGCATCCGGCGCAGCATCTTTGATACCTGCCAGTTCCGGGATTTTCGCCACAACAGCGTCAATCACATGGTCGAGC‑TGCGTCCAGTCCACTTCACGGCTCAGCAGGGTGCTGTGCAGGCTGTGT‑AACCAGCGCCAGCTTTCCAGCATGACAGTTTTGCTGTCGTAATAAGCAGGATCGTAAACCTGGAAGAAACGTTGGGCGCGGCCTTCGTTGTTGATCACCGTACCGTCGCTTTCAGCAAAGCTGGCAGCAGAAAGTACCAGATGGGCGTTTTCCATAATCGCTGTGCGTTGATGATCAACCACCATCACCAGCGGTGCTTTAGCCAGCGCAGCATTCACGCGGATAGCAGAAGCGTGACGATGCAGATCGTTTTCCAACACCACCACCGCGTCGGC  >  CP042583/1969214‑1969773

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A