Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,972,640 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,972,6400GC100.0% 647.6 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (141/132);  total (141/132)
*CP0425831,972,6410CG99.3% 630.4 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (137/131);  total (141/132)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,972,6420TA97.4% 623.1 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (140/125);  minor base G (1/6);  total (141/132)
Fisher's exact test for biased strand distribution p-value = 5.84e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 273 total aligned reads displayed.

TTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTGCTGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATGCGCGTGAGTGTCCTCATCGATCATCATGTTTGG  >  CP042583/1972357‑1972920
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                      
ttCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACTCAGCAGGTAACGGATGTTCCTGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCCGTCCAGaa                                                                                                                                                                                                                                                                                     >  2:1339631/1‑289 (MQ=255)
           tttttGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGcgccgc                                                                                                                                                                                                                                                                          <  1:208127/289‑1 (MQ=255)
             tttGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACACCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCCGTCGAGACGCccgccccgcc                                                                                                                                                                                                                                                                         >  2:1757509/1‑288 (MQ=255)
               tGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCcgcg                                                                                                                                                                                                                                                                      <  1:1125638/289‑1 (MQ=255)
               tGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCcgcg                                                                                                                                                                                                                                                                      <  1:999812/289‑1 (MQ=255)
                gCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCcgcg                                                                                                                                                                                                                                                                      >  1:805370/1‑288 (MQ=255)
                gCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCgcgc                                                                                                                                                                                                                                                                     <  1:455252/289‑1 (MQ=255)
                gCCAAGCAGACCCGCTGCGGTGGCTTGGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATAGGCGCCTCGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCgcgc                                                                                                                                                                                                                                                                     <  1:1757509/289‑1 (MQ=255)
                           ccGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCCTCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCCGGTAACGGAAGTTCATGGATTCGTCTTTAGGCATCAGGCTCCAATTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGaac                                                                                                                                                                                                                                                          >  1:1880157/1‑287 (MQ=255)
                              cTTCGGTGGGTTCGGCAATGGGACGGGGCAGATTAACGGCGGCTTCGGTATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGGGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAg                                                                                                                                                                                                                                                        <  2:1168365/288‑1 (MQ=255)
                              cTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAg                                                                                                                                                                                                                                                        >  2:911643/1‑288 (MQ=255)
                                           ggCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAg                                                                                                                                                                                                                                                        >  1:768766/1‑275 (MQ=255)
                                                    aCGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAtt                                                                                                                                                                                                                                 <  1:1492262/289‑1 (MQ=255)
                                                         gcACATTAACTGCCGCTTCGATATATTGGCCACGCAGAAAGATGTGGCCACGGTAATCTTTCAGCGCAAACCCGAGTATGGGCATACCTTCCCCCCGCGGGTGCGCCGGTTGCTCCATCAACGGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACGTCGGGTAACGGTTGTTCATGAATTCGTCTTTGGGCATCAGGCTCCATTTCGGGCCAGTCAGGAGGCCCGCGCCGCCGCGCCCTTTCGGACCAGCTTCTTTTACCTAATTAACGTTTTCGt                                                                                                                                                                                                                             <  2:176481/288‑1 (MQ=255)
                                                                  cTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACa                                                                                                                                                                                                                    >  1:2436612/1‑288 (MQ=255)
                                                                  cTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGCAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAtt                                                                                                                                                                                                                                 >  1:639306/1‑275 (MQ=255)
                                                                     ccGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGccc                                                                                                                                                                                                                >  1:564902/1‑289 (MQ=255)
                                                                     ccGCTTCGATATATTCGCCACGCAGGAAGATGGAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGcc                                                                                                                                                                                                                 <  1:169660/288‑1 (MQ=255)
                                                                       gcctCGATATATTCGCCACGCAGGAAGATGCAGCAACGGTAAGCTTTCAGCTCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCACCACCAGGCGGTCTTTATCGGTGCCCGGCTCCATTTCATCGGCCTTACACAGCAGGTAACGGATGTTCATGGCTCCGTCTTTCGGCATCAGGCTCCATTTACGGTCAGTCGAGATGCCCGGCCCGCCGCGCCCCTTCAGCCTAGTGCGTTTTATCCGCTTCACGCTTTCGCCCggcatcacacaga                                                                                                                                                                                                              >  2:1644541/4‑278 (MQ=255)
                                                                       gCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCgg                                                                                                                                                                                                              >  1:500006/1‑289 (MQ=255)
                                                                           ggagatatTCGCCAGGCAGGAAGAGGTGGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCCTACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAg                                                                                                                                                                                                          <  2:1412300/285‑1 (MQ=255)
                                                                           agATATATTCGCCACGCAGGAAGCAGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTGCACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAg                                                                                                                                                                                                          <  2:2340452/288‑1 (MQ=255)
                                                                                   tCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAt                                                                                                                                                                                                                                  <  2:1964202/257‑1 (MQ=255)
                                                                                   tCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAt                                                                                                                                                                                                                                  >  1:1964202/1‑257 (MQ=255)
                                                                                                 gttGTAGCCAAGGGAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTa                                                                                                                                                                                     <  2:1230226/286‑1 (MQ=255)
                                                                                                          aCGGTAAGCTTTCAGCGCAAACGCGGAGATGCGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTtg                                                                                                                                                                           <  1:1989832/289‑1 (MQ=255)
                                                                                                            ggTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAttt                                                                                                                                                                                                                                <  2:1091060/234‑1 (MQ=255)
                                                                                                            ggTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGAttt                                                                                                                                                                                                                                >  1:1091060/1‑234 (MQ=255)
                                                                                                              tAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCGGCCGGGGCGGCAGTTCCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTtgctg                                                                                                                                                                        <  2:2446258/288‑1 (MQ=255)
                                                                                                               aaGCTTTCAGCGCAAACGCGGAGAAGGGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTtgctgc                                                                                                                                                                       <  1:2135582/288‑1 (MQ=255)
                                                                                                                                     gaTGAGCATACCTTCCACCCGCAGGTGCGGCAGTGCCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTgg                                                                                                                                                 <  2:427367/288‑1 (MQ=255)
                                                                                                                                              aCCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGgag                                                                                                                                                                                                                       <  1:2001773/209‑1 (MQ=255)
                                                                                                                                              aCCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGgag                                                                                                                                                                                                                       >  2:2001773/1‑209 (MQ=255)
                                                                                                                                              aCCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCa                                                                                                                                       >  1:2358956/1‑289 (MQ=255)
                                                                                                                                                cTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCcgcg                                                                                                                                                                                                                                                                      >  1:67936/1‑160 (MQ=255)
                                                                                                                                                cTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATc                                                                                                                                     <  1:1422275/289‑1 (MQ=255)
                                                                                                                                                            gtagCGGCAGTTGCCCGATCAACAGGCGGTCTTTATAGTGAGCCGGCTCCAGTTCATCGGCATTACACAGCAGGTACCGGATGTTCATGGATTCGTCTTTCGGGATCCGGCTCCATTTCAGGCCAGTCGGGAAGCCCGCGCCGCCGCGCCCTGTCAGACCAGCGTCTTTTCCCTGATTAACGATTTCGGCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCGTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGcc                                                                                                                          <  2:2261910/285‑1 (MQ=255)
                                                                                                                                                             gTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATcgcg                                                                                                                                  <  1:2503201/279‑1 (MQ=255)
                                                                                                                                                             gTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATcgcg                                                                                                                                  >  2:2503201/1‑279 (MQ=255)
                                                                                                                                                                cGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAg                                                                                                                                                                                                                                                        >  2:1569853/1‑158 (MQ=255)
                                                                                                                                                                cGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAg                                                                                                                                                                                                                                                        <  1:1569853/158‑1 (MQ=255)
                                                                                                                                                                        gCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTTTTCGTCCAGCCACACTGGCTGGTTGTCATCGCCCAGACGCCAGGTCAGCGGAt                                                                                                              >  1:2553437/1‑288 (MQ=255)
                                                                                                                                                                        gCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCg                                                                                                                                                               >  2:1382653/1‑239 (MQ=255)
                                                                                                                                                                        gCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATg                                                                                                             <  1:348423/289‑1 (MQ=255)
                                                                                                                                                                             aTCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCg                                                                                                                                                               >  1:535387/1‑234 (MQ=255)
                                                                                                                                                                                      cGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTAc                                                                                               >  1:413122/1‑289 (MQ=255)
                                                                                                                                                                                        gTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAg                                                                                                  <  1:983969/284‑1 (MQ=255)
                                                                                                                                                                                        gTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAg                                                                                                  >  2:983969/1‑284 (MQ=255)
                                                                                                                                                                                        gTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACgg                                                                                             >  1:1343400/1‑289 (MQ=255)
                                                                                                                                                                                                   tGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGc                                                                                                                           >  2:648867/1‑248 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCCGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTCCCTGATTAACGCTTTCGTCCGGAGACAGCCCGGTCAGCCCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGGCTTCGTCCAGCCACACTGGCTGTTTGTCATCGCGTCCACGCCCGGCCAGCGGCGTCGGTTCGGGCGTACGGAAATCGTTTTTCa                                                                                >  2:2729742/1‑289 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGc                                                                                                                                                                                                                  <  2:2126319/159‑1 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAg                                                                                                                                                          <  2:534495/215‑1 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTgg                                                                                                                                                 <  1:1136260/224‑1 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTgg                                                                                                                                                 >  2:1136260/1‑224 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCa                                                                                                                                <  1:601719/241‑1 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCa                                                                                                                                >  2:601719/1‑241 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCa                                                                                >  2:2373113/1‑289 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCa                                                                                >  1:1736787/1‑289 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCa                                                                                >  1:1037234/1‑289 (MQ=255)
                                                                                                                                                                                                     cccGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCCTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTAt                                                                                                                                                                  >  2:301811/1‑207 (MQ=255)
                                                                                                                                                                                                       cGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTc                                                                                                                                                                                                                            >  1:130388/1‑147 (MQ=255)
                                                                                                                                                                                                       cGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTc                                                                                                                                                                                                                            <  2:130388/147‑1 (MQ=255)
                                                                                                                                                                                                       cGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCAtt                                                                              >  1:1789655/1‑289 (MQ=255)
                                                                                                                                                                                                       cGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTAGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCTCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACATCCCGGTCAGCGCCTTACGCACGCCTTCTTACCCGTTTTTGCTGCGGTTTTCGTCCAGCCCCACTGTCAGTTTGTCATCGCGCAGTCACCAGGTCAGCGGATGCGTTTCGGGAGTACGGATTATGTGTTTCagt                                                                              >  2:2046342/1‑287 (MQ=255)
                                                                                                                                                                                                            ccATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATAc                                                                         <  1:1229389/289‑1 (MQ=255)
                                                                                                                                                                                                            ccATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCCCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGCGTACGGATAATGTTTTTCATTtata                                                                          >  2:841958/1‑288 (MQ=255)
                                                                                                                                                                                                               tttCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTAGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATAcc                                                                        >  1:1442845/1‑287 (MQ=255)
                                                                                                                                                                                                                    tCGTCATTACACAGTAGGTCACGGATGTTCATGGATTCGTCTGTCGGCATCAGGCCCCATTTCAGGCCAGACGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGTAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCcag                                                                 <  1:2046342/289‑1 (MQ=255)
                                                                                                                                                                                                                    tCGGCCTTACACAGCAGGTAACGGATTGTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCcag                                                                 <  2:564902/289‑1 (MQ=255)
                                                                                                                                                                                                                    tCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCcag                                                                 <  1:2216491/289‑1 (MQ=255)
                                                                                                                                                                                                                    tCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTGCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCcag                                                                 <  1:880295/289‑1 (MQ=255)
                                                                                                                                                                                                                         aTTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGtt                                                            <  1:2373113/289‑1 (MQ=255)
                                                                                                                                                                                                                                agcagGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACCCTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGa                                                      >  1:2277443/1‑288 (MQ=255)
                                                                                                                                                                                                                                  cagGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGttt                                                                                    <  1:2148887/256‑1 (MQ=255)
                                                                                                                                                                                                                                  cagGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATc                                                    >  1:1616672/1‑288 (MQ=255)
                                                                                                                                                                                                                                     gTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAg                                                                                                  <  2:78611/239‑1 (MQ=255)
                                                                                                                                                                                                                                     gTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCcag                                                                 >  2:2230922/1‑272 (MQ=255)
                                                                                                                                                                                                                                     gTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCtt                                                >  2:442329/1‑289 (MQ=255)
                                                                                                                                                                                                                                       taCGTATGTTCATGGTTTTGTCTTCCGGCATCAGGCTCCATTTCAGGCCAGTCGAGACGCCCGCGCCGCCTCGCCCTTTCAGACCAGCGTCTTTTACCGGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTTCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              <  2:1442845/288‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              <  1:1021110/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              >  1:2687642/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaCGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              >  1:1357627/1‑289 (MQ=255)
                                                                                                                                                                                                                                       aaCGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCCCCGCCGCTCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              <  1:1155143/289‑1 (MQ=255)
                                                                                                                                                                                                                                       aaCGGAGGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTcc                                              <  2:892101/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aCGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGga                                                                                                                                                                                                                        >  2:1717915/1‑118 (MQ=255)
                                                                                                                                                                                                                                            aTGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATaa                                                                                         <  1:2462653/241‑1 (MQ=255)
                                                                                                                                                                                                                                            aTGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATaa                                                                                         >  2:2462653/1‑241 (MQ=255)
                                                                                                                                                                                                                                              gTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACCGGCTGTTTGTCATCGCGCAGACGCCAGGTACGCGGATGCGTTTCGGGGGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTcg                                       >  1:1394103/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ttCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGTCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAg                                      >  2:1912043/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCggg                                           <  2:395177/284‑1 (MQ=255)
                                                                                                                                                                                                                                                tCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGTCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGa                                     <  1:1912043/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    ggATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATgcg                                 <  1:2585537/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    ggATTCGGCTTTCGGCATCGGGCTCCATTCCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATgcg                                 <  2:103503/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     gcttCGTCTTTCGGCATCAGGCTCCATTTCGGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATgcg                                 <  2:1273629/286‑1 (MQ=255)
                                                                                                                                                                                                                                                      aTTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGTCAGGCCAGCGGATGCGTGTCGGGAGCACGGATACTGGTTTTCATTTATACCGTTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATGcgcg                               >  2:740444/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           tCTTTCGGCATCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTtgctgc                                                                                                                                                                       >  1:140358/1‑148 (MQ=255)
                                                                                                                                                                                                                                                              gtCGGCAGCAGGCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACGGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATGCGCGTGAgtgt                        <  1:2630783/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ggCTCCATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACGGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCCCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATGCGCTTGAGGGCCCTCATCgct              >  2:2630783/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                             cATTTCAGGCCAGTCGAGAAGCCCGCGCCGCCCCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATAGCGCAGACGCCAGGTCAGCGGATACGTTTCGGGGGTCCGGATAATGTTTTTCATTtata                                                                          >  1:1265857/1‑223 (MQ=255)
                                                                                                                                                                                                                                                                                           |||                                                                                                                                                                                                                                                                                      
TTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATATATTCGCCACGCAGGAAGATGTAGCCACGGTAAGCTTTCAGCGCAAACGCGGAGATGAGCATACCTTCCACCAGCAGGTGCGGCAGTTGCTCCATCAACAGGCGGTCTTTATAGGTGCCCGGCTCCATTTCATCGGCATTACACAGCAGGTAACGGATGTTCATGGATTCGTCTTTCGGCATCAGGCTCCATTTCAGGCCAGTGCTGAAGCCCGCGCCGCCGCGCCCTTTCAGACCAGCGTCTTTTACCTGATTAACGATTTCGTCCGGAGACAGCCCGGTCAGCGCCTTACGCGCGCCTTCGTAACCGTTTTTGCTGCGGTATTCGTCCAGCCACACTGGCTGTTTGTCATCGCGCAGACGCCAGGTCAGCGGATGCGTTTCGGGAGTACGGATAATGTTTTTCATTTATACCGCTCCAGCAGTTCAGGGATCGCTTCCGGGGTCAGATGCGCGTGAGTGTCCTCATCGATCATCATGTTTGG  >  CP042583/1972357‑1972920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A