Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F167 I0 R1
|
453 |
183.6 |
3912170 |
91.8% |
3591372 |
227.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_007779 |
2,790,905 |
T→C |
100% |
V326A (GTC→GCC) |
gabD → |
NADP‑dependent succinate‑semialdehyde dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_007779 | 2,790,905 | 0 | T | C | 98.8%
| 278.1
/ ‑3.8
| 90 | V326A (GTC→GCC) | gabD | NADP‑dependent succinate‑semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (52/35); total (55/35) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.28e-01 |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
ACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATG > NC_007779/2790671‑2791126
|
aCATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCAcc > 1:975685/1‑239 (MQ=255)
gAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCggg > 1:1506584/1‑238 (MQ=255)
aaGTGTCGCGGGAGCTGGGCGGTAACGCGCC‑GTTTTGCGTCTTTGACGAGGCCGCCCTCGAAAAGGCCGGGGAGGGC‑GCGCGGGCCTCGAAATTCCGCAACGCCGGGAAACCC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCg < 2:975685/239‑1 (MQ=255)
aGTGTCGCTGGAGCTGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAAGCGCGCCACCAACAGGCCg > 2:1848533/1‑238 (MQ=255)
tGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGaaaaa > 1:319609/1‑239 (MQ=255)
ggCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCCGCTCGATGAAAAAGc > 2:1795028/1‑239 (MQ=255)
tAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTa > 1:1933345/1‑238 (MQ=255)
aCGCGCCGGTTTATCGTCTTTGACGAGGCCGCCCGCGCCAAGGCCGTGGAGGGC‑GCGCTGGCCTCAAAATTCCGCAACGCGGGGAAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGc < 2:558506/239‑1 (MQ=255)
cgcC‑GTTTATCGTCTTTGACGATGCCGCCCTCGACACAACCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGACAACCGCCTGTATGTGCAGGACGGCGTGTATTACCGTTTTGACGAAAAATTGCAGCAGGCCTTGAGCAAATTTCACATCGGCGACCGGCTGGATAAAGGCCGCACCATCGGGCCGCTGATCGATGAAAAAGGGGAAGCaaac > 2:1888337/1‑238 (MQ=255)
cgcC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCacaa > 1:5108/1‑239 (MQ=255)
gcC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAg > 2:848826/1‑239 (MQ=255)
cc‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAg < 1:805131/238‑1 (MQ=255)
ttttcttttttGACGATGCCGCCCGCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTGGAAATTCCGCAACGCCGGGCAAACG‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGaa < 1:1537264/231‑1 (MQ=255)
ttttCGTCTTTGACGATGCCGCCCTCTAAAAAGCCGT‑GAAGGCGGCGCTGCCCTCGAAATCCCGCACCGCCGGGCAACCC‑TGCTTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGaa < 1:290975/236‑1 (MQ=255)
ttACCGTTTTTGACGATGCCGACCTGGACAAGGCCGTGGAAGGC‑CCGTTGGCCTCGAAATCCCGC‑ACCCCGGGGAAACCTTGCGTCTGCCCACACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGaa < 1:1907505/239‑1 (MQ=255)
aTCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCCAACTGCACATCGGCGACGGGCTGGATAACGGCGCCCCCATCGGGCCGCTGAACGAGGAAAAAGCGGTAGCAAAAGAGGaaaa > 2:1142343/1‑237 (MQ=255)
gtttttGCCGATGCCGCCCCCGACAAAGCCGTGGAAGCC‑GCGCTGGCCTCGAATTTCCGCACCGCCGGGCAACCC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCa < 1:1630909/236‑1 (MQ=255)
tttGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATACCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGAAGGCGTGTATGAACGTTTTGCCGGCAAATTGCATCAGGAAGTGAGCATACTGCACATCAGGGACGGGCTGGATAACGGCCCTACCATCGGGCCGCACATCGATGAAAAAGCTGTAACAAACGGGGAAGATCatat > 2:1631548/1‑239 (MQ=255)
tGCCGCCCTCGACAAAGCCGTGGAAGGC‑GCGCGGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGGCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATg < 1:230322/239‑1 (MQ=255)
tGCCGACCTCGACAAAGCCGTGGAGGGC‑GGGCTGGCCTGGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCCCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGAt < 1:1848533/238‑1 (MQ=255)
tGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATg > 2:1847278/1‑239 (MQ=255)
tGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGAGGAAGAGCATATCGCAGATg > 2:1246008/1‑239 (MQ=255)
ggacgcccTCGCAAAAGCCGTGGAGGGC‑GCGCTGCCCCAGAAATTCCGCACCGCCGGGCAAACC‑GGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATg < 2:1142365/233‑1 (MQ=255)
gCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATgc > 1:1827634/1‑239 (MQ=255)
cGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATgcg < 1:106628/238‑1 (MQ=255)
gACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGaa > 1:1807226/1‑239 (MQ=255)
aGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGgc > 1:283639/1‑238 (MQ=255)
tGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGgcgcgcgc > 1:102977/1‑239 (MQ=255)
c‑gcgcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGACGAGCATATTGCCGATGCGCTGGAGAAGGgcgcgccgcgggttt > 2:1643362/1‑230 (MQ=255)
c‑gcgcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTg > 1:836005/1‑206 (MQ=255)
c‑gcgcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGttt > 1:1018892/1‑239 (MQ=255)
c‑gcgcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGttt > 1:1129207/1‑239 (MQ=255)
c‑gcgcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGttt > 1:1133344/1‑239 (MQ=255)
gcgcTGGCCACGAAATTCCGCACCGCCGGGCAAACC‑GGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTg < 1:723206/239‑1 (MQ=255)
gcgggCCTCGAATTCCCGCAACGCGGGGCAAACC‑GGCGTCGGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTgc < 1:1365752/235‑1 (MQ=255)
gcTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGCAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTGTgcg > 1:1921102/1‑239 (MQ=255)
tCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCAc > 1:1737513/1‑239 (MQ=255)
cGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGTCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGAAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGCAAAggggcaca > 2:1079777/1‑232 (MQ=255)
cGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGCAAAGCGGCCGAAAACGGCGGCCAcgtcgtt > 2:796587/1‑235 (MQ=255)
cGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTCTGCGGCGGTAAAGCGCACCAACGCGGCGGCAActtcgttc > 2:186798/1‑235 (MQ=255)
tcggcccaaaCCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCa < 1:657167/230‑1 (MQ=255)
tGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGcc < 1:377172/239‑1 (MQ=255)
cgcCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGGGGTTTGCGGCGGTCAAAGGCAAGGAGGCGGCGGACACTTCTTccccccc > 1:1458857/1‑233 (MQ=255)
cAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCa < 1:517487/239‑1 (MQ=255)
aaCCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGACACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGAGGAAGAGCATATTGACGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAACGCACGGACGCGGGGGCAACTTCTTTCAGCCGAGCAt > 1:144063/1‑239 (MQ=255)
gTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCtggtgg < 1:848826/239‑1 (MQ=255)
tATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGa > 2:715116/1‑239 (MQ=255)
gCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGtt > 1:1765815/1‑238 (MQ=255)
cAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGGTcc > 1:450616/1‑239 (MQ=255)
cAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGGGGACGTTcc > 1:1270266/1‑239 (MQ=255)
aGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCg > 1:275802/1‑239 (MQ=255)
aCGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGc < 1:1435087/238‑1 (MQ=255)
aCGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAAACTCTTCCAGCCGACCATTCTGGTGGGCGTTCCGGc > 1:1262983/1‑238 (MQ=255)
cGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGcc < 1:1142343/238‑1 (MQ=255)
cGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGcc < 1:1631548/238‑1 (MQ=255)
cGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAAc > 1:1842172/1‑238 (MQ=255)
cGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAACGGACGCACGCGGCGGCAACTTCTTCCAGCCGACCCCTTTGTGGGGCGCTCCCGCCAAc > 2:1748667/1‑238 (MQ=255)
gtgtATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACg < 1:533209/238‑1 (MQ=255)
tgtATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCg < 1:583155/230‑1 (MQ=255)
gtATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCa < 2:1882790/239‑1 (MQ=255)
aTGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCaaa < 1:32756/239‑1 (MQ=255)
aTGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCaaa < 1:1748667/239‑1 (MQ=255)
ccGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAgtgt < 1:1188110/239‑1 (MQ=255)
cGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGACCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACCAACGCGGCGGCAACTTCCTCCAGCCGGCCCTTCTGGGGGGCGGTCCGGCCCACGCCCAAggggc > 1:156211/1‑235 (MQ=255)
ttttGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACATCTTCCAGCCGACCATTCTGGCGGCCGCTCCGGCCCACGCCAAAGTGTCG‑a > 1:688351/1‑239 (MQ=255)
ttttGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGAGCACGAAAGCGGCGGGCACATCCTCCAGCCGACCATTATTGTGGACGGTTCGGCCAACGCCcaacgtgcct > 2:583155/1‑232 (MQ=255)
ttttGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAACGCACGAACGCGGGGGCAACCTCTTCCAGCCGGCCATTCTTGTGGACGGTCCGGCCAACCCCCAAGTGACG‑a > 2:1855859/1‑239 (MQ=255)
ttttGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGGAAAACGCACGAACGCGGCGGCGACTTCTTCCAGCCGCCCATTCTGGGGGACGGTCCGGGCCACCCCAAAGTGTCG‑a > 2:558445/1‑239 (MQ=255)
ttGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCCCACCGAAGCGGCGGGAACCTCCTCCCGGCGACCATTCTGGTGGGCGGTACGGCCCACGCCCAAGGGTCG‑gaa > 2:127690/1‑239 (MQ=255)
cGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑Aaag‑aag < 2:1267905/239‑1 (MQ=255)
aaaaTGGCGGCCTGCAGTGAGGAAGCTGCACGACGGCTACTGGCTGGATAAAGGCGCCGCCATCCGGCCGCTGATCGATGAACATGCGGTAGCGAGAGTGGAGTGGCATATTGCCGATGTGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTATAGCTCAGGAGCGCGGCGGCAACTGCTAGCAGGCGACCGTGCTGGTGGACGTTCCCGCCACCGCCCAGGTGTCG‑Aaag‑gaggg < 2:66528/238‑3 (MQ=255)
caggcagTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGGGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGcc > 1:1827069/1‑238 (MQ=255)
caggcagTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATAAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGcc > 1:696951/1‑238 (MQ=255)
ggcagTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGcccc > 1:771913/1‑238 (MQ=255)
aGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAAAGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGGGGACGTTCCGGCCAACGCCCAAGAGTCG‑AAAG‑AAGAAACGTTCGGCCCCCCCGccc > 1:1053282/1‑238 (MQ=255)
aGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGccc > 1:1351666/1‑238 (MQ=255)
aaaCTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCg < 1:791016/237‑1 (MQ=255)
aaCTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAAGGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGccg > 1:370821/1‑237 (MQ=255)
aCTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACCAACGCGGCGGCAACTTCTTCCAGCCGGCCATTCTGGTGGAAGTTCCCGCCAAAGCCAAAGTGTTG‑AAAGAAAAAAACTTCCGCCCCCCTCGccccccgt > 2:1520094/1‑235 (MQ=255)
cTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCCCGCCCCGCTGt > 1:1104802/1‑238 (MQ=255)
cTGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGGGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGtt < 2:1133344/239‑1 (MQ=255)
tGCACGTCGGCGACGGGCGGGATAACGGCGCCGCCATCGGGCGGCTGATCGATGAAAAAGCGGTAGCAAATGTGGAAGAGGATATTGCCGATGCGGTGGAGAAAGGCGGGCGCGTGGATTGCGGCGGTAAAGCGCACGAGCGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCACCGCAAAGGTGTCG‑AAAG‑AAGAGACGTACGGCCCCCTCACCCCGCTGTTc < 2:1414672/239‑1 (MQ=255)
tGCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTc < 1:715116/239‑1 (MQ=255)
gCACATCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACCCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTc > 1:1545053/1‑238 (MQ=255)
acaTCGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTcc > 1:175506/1‑237 (MQ=255)
cGGCGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTa < 1:558445/239‑1 (MQ=255)
cGACGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCCCGAACGCGGCGGCGACTTCTTCCAGCCGCCCCCTCTGGTGGACGGTCCCGCCCACCCCCAAACGGCG‑AAAG‑AAGAGACGTTCGGCCCCCTCCCCCCCCCCTTCCGCgttttag > 2:1361194/1‑235 (MQ=255)
aCGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCGGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGAAAAACGAACGAACACGGGGGCAACTTCTTATAACGGAACCATCTGGGGGGCATTCCGGGCAACGGCAAAATGTCGAAAAG‑AAGAG‑CGGTTGGGCCCATCGCCCCGCCGTTACGccgttaaatt > 2:702489/1‑230 (MQ=255)
aCGGGCTGGATAACGGCGCCACCAGCGGGCCGCCGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCGTATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACATTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGa < 2:348768/238‑1 (MQ=255)
cGGGCTGGATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATg < 2:1129207/239‑1 (MQ=255)
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ACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCC‑GTTTATCGTCTTTGACGATGCCGACCTCGACAAAGCCGTGGAAGGC‑GCGCTGGCCTCGAAATTCCGCAACGCCGGGCAAACC‑TGCGTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCG‑AAAG‑AAGAGACGTTCGGCCCCCTCGCCCCGCTGTTCCGCTTTAAAGATG > NC_007779/2790671‑2791126
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
