Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F167 I0 R1 101 154.8 3682992 93.3% 3436231 212.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_007779 2,910,761 A→G 100% L516P (CTG→CCG)  Y75_RS14515 ← GTP pyrophosphokinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0077792,910,7610AG100.0% 354.4 / ‑6.7 97L516P (CTG→CCG) Y75_RS14515GTP pyrophosphokinase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (48/48);  minor base C (1/0);  total (49/48)
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

TTATCTTTACTGCGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCAGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATGCAGCG  >  NC_007779/2910527‑2910996
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                           
ttATCTTTACTGCGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTTCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCCGCAACTCGTCGACATCCTTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGGTGATCCCCACATGGTCCCGCt                                                                                                                                                                                                                                          >  2:1367695/1‑238 (MQ=255)
 tttttttACGGCGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCtcg                                                                                                                                                                                                                                        <  2:1321533/235‑1 (MQ=255)
     tttACTGCGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTcgtcgt                                                                                                                                                                                                                                    <  1:989843/239‑1 (MQ=255)
            cGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGAt                                                                                                                                                                                                                             >  1:1788433/1‑239 (MQ=255)
                                        gAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:1755059/239‑1 (MQ=255)
                                         aaGTTGTTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGCCGGATACCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:146413/238‑1 (MQ=255)
                                         aaGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:1002122/238‑1 (MQ=255)
                                             tGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATACCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTc                                                                                                                                                                                            <  1:1063971/239‑1 (MQ=255)
                                                ttCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGt                                                                                                                                                                                             >  2:783474/1‑235 (MQ=255)
                                                tacaggccggcggcgTCCTGTTC‑TCCGCAGTCCGGCTTATTAAATTGCGATTGCAGGAAGTCCACCCCTTA‑ATTGTGGCGGATACCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCt                                                                                                                                                                                          <  2:1483194/231‑1 (MQ=255)
                                                   aGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 >  1:54629/1‑228 (MQ=255)
                                                   aGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  2:54629/228‑1 (MQ=255)
                                                      gcggcggcgTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTAc                                                                                                                                                                                    <  1:1732651/238‑1 (MQ=255)
                                                               tCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGc                                                                                                                                                                          >  2:210779/1‑239 (MQ=255)
                                                                         cGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTc                                                                                                                                                                >  1:1379379/1‑239 (MQ=255)
                                                                         cGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCGGTTTACGGAAACCGGCGTgcagtt                                                                                                                                                                  >  2:1232452/1‑232 (MQ=255)
                                                                            cACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGa                                                                                                                                                              <  1:833150/238‑1 (MQ=255)
                                                                            cACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGa                                                                                                                                                              <  1:337919/238‑1 (MQ=255)
                                                                              cT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAAc                                                                                                                                                            >  2:90420/1‑238 (MQ=255)
                                                                                 cGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGcc                                                                                                                                                         <  1:1367695/239‑1 (MQ=255)
                                                                                  ggCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGccc                                                                                                                                                        >  1:1402744/1‑239 (MQ=255)
                                                                                  ggCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGccc                                                                                                                                                        >  1:313929/1‑239 (MQ=255)
                                                                                       attaAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGACACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACg                                                                                                                                                     >  1:1755579/1‑237 (MQ=255)
                                                                                            aTTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTTTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGtt                                                                                                                                              >  1:1380920/1‑239 (MQ=255)
                                                                                            aTTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGtt                                                                                                                                              >  1:894257/1‑239 (MQ=255)
                                                                                              tGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:163742/186‑1 (MQ=255)
                                                                                              tGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 >  2:163742/1‑186 (MQ=255)
                                                                                              tGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTtgt                                                                                                                                            >  1:151271/1‑239 (MQ=255)
                                                                                              tGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTtgt                                                                                                                                            >  1:1210700/1‑239 (MQ=255)
                                                                                                      cAGGAAGTCCACCA‑CTGCATTGAGACGTTTGCCCCCGCCACCAATCGCCGCTAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCGTTCAGGCTGATGCCCAGATGTTACGGCTGGTCGTCAAGGATTTGCCGCCCGGCCAGAATGTTTTTGTCGCGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCAAGAGCTGGTTGTGACGTAAc                                                                                                                                    <  2:391740/239‑1 (MQ=255)
                                                                                                         gAAGTTCACCATCTG‑ATTGAGCCGGATATCCCCGCCACCACTCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCg                                                                                                                                  <  1:1456538/238‑1 (MQ=255)
                                                                                                                 ccATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCt                                                                                                                                                                                          <  2:784045/174‑1 (MQ=255)
                                                                                                                 ccATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCt                                                                                                                                                                                          >  1:784045/1‑174 (MQ=255)
                                                                                                                       g‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGa                                                                                                                                          >  2:1747434/1‑216 (MQ=255)
                                                                                                                       g‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGa                                                                                                                                          <  1:1747434/216‑1 (MQ=255)
                                                                                                                            gagaCGGATACCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGt                                                                                                               <  1:88532/239‑1 (MQ=255)
                                                                                                                             agacgtgatcccccTCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGt                                                                                                               <  2:772721/228‑1 (MQ=255)
                                                                                                                             agaCGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTc                                                                                                              >  1:632914/1‑239 (MQ=255)
                                                                                                                             agaCGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTc                                                                                                              >  2:1213262/1‑239 (MQ=255)
                                                                                                                               aCGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCAc                                                                                                            >  2:1156974/1‑239 (MQ=255)
                                                                                                                               aCGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCAc                                                                                                            >  1:1359928/1‑239 (MQ=255)
                                                                                                                                cGGATACCCCAGCCCACAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGACCGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCa                                                                                                             <  2:1359928/237‑1 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACg                                                                                                                                                                                               <  1:1945/152‑1 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCa                                                                                                             <  2:719860/234‑1 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCa                                                                                                             >  1:719860/1‑234 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACg                                                                                                           >  1:811852/1‑236 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGc                                                                                                         <  1:181023/238‑1 (MQ=255)
                                                                                                                                   atatCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCCCCCAGCCAGAATGTTTTTGTCACg                                                                                                                                                                                               >  2:1945/1‑152 (MQ=255)
                                                                                                                                        cccGCCCCCAATCGCCGCCAGCAACTCGTCGACTTCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCCCGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGt                                                                                                   <  2:1183374/239‑1 (MQ=255)
                                                                                                                                        cccGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGt                                                                                                   >  1:1057721/1‑239 (MQ=255)
                                                                                                                                           gCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:683064/142‑1 (MQ=255)
                                                                                                                                           gCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 >  2:683064/1‑142 (MQ=255)
                                                                                                                                           gCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGa                                                                                                                                                              <  1:1256595/177‑1 (MQ=255)
                                                                                                                                           gCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGa                                                                                                                                                              >  2:1256595/1‑177 (MQ=255)
                                                                                                                                           gCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGGTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGTCGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTGCg                                                                                                >  2:1602236/1‑239 (MQ=255)
                                                                                                                                            ccaccaATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGt                                                                                                                              >  2:722894/1‑208 (MQ=255)
                                                                                                                                            ccaccaATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGt                                                                                                                              <  1:722894/208‑1 (MQ=255)
                                                                                                                                             cgccaATCGCCGCCTGCAACTCGTCGGCATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCGGGTCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCgg                                                                                               <  2:1411185/236‑1 (MQ=255)
                                                                                                                                             caccaATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCgg                                                                                               <  1:25827/238‑1 (MQ=255)
                                                                                                                                             caccaATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGGTCg                                                                                                >  1:1550438/1‑237 (MQ=255)
                                                                                                                                                   tCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGtt                                                                                          >  1:369633/1‑237 (MQ=255)
                                                                                                                                                      ccgcccgcAACTCGTCGACATCATTGAAGTGGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTgg                                                                                     <  2:1339826/239‑1 (MQ=255)
                                                                                                                                                      ccgccAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTgg                                                                                     <  2:894257/239‑1 (MQ=255)
                                                                                                                                                       cgccAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 >  2:311427/1‑130 (MQ=255)
                                                                                                                                                       cgccAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCa                                                                                                                                                                                                 <  1:311427/130‑1 (MQ=255)
                                                                                                                                                          cAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGa                                                                                 <  1:210779/239‑1 (MQ=255)
                                                                                                                                                                   gtcgACATCATTGATGTTGTAACGCGGGAGCAGATGTGTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGt                                                                                                               <  2:1600169/200‑1 (MQ=255)
                                                                                                                                                                        catcatTGGAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGGGATAATTTCAATCTgg                                                                   >  1:1557594/1‑239 (MQ=255)
                                                                                                                                                                         atcatTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGt                                                                  <  1:1156974/239‑1 (MQ=255)
                                                                                                                                                                           catTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTGATGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCg                                                                <  2:1379379/239‑1 (MQ=255)
                                                                                                                                                                             ttGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTggg                                                                                                     >  1:1600169/1‑200 (MQ=255)
                                                                                                                                                                                    tGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTg                                                        <  1:90420/238‑1 (MQ=255)
                                                                                                                                                                                     gTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGcc                                                      >  2:34998/1‑238 (MQ=255)
                                                                                                                                                                                     gTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCa                                                      >  1:542151/1‑239 (MQ=255)
                                                                                                                                                                                      tAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGGGATAATTTCAATCTGGTCGCCCATCTGCa                                                      >  1:1457734/1‑238 (MQ=255)
                                                                                                                                                                                        aCGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCt                                                   <  2:1402744/239‑1 (MQ=255)
                                                                                                                                                                                            ggCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTa                                               >  1:526178/1‑239 (MQ=255)
                                                                                                                                                                                             gcagcaGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGGGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAg                                              >  1:1732628/1‑239 (MQ=255)
                                                                                                                                                                                              cagcagATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAg                                              <  1:990904/238‑1 (MQ=255)
                                                                                                                                                                                                   gATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAAc                                        >  1:875159/1‑239 (MQ=255)
                                                                                                                                                                                                     tGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGaa                                         <  1:1156852/236‑1 (MQ=255)
                                                                                                                                                                                                     tGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGaa                                         <  2:632914/236‑1 (MQ=255)
                                                                                                                                                                                                     tGTTTTTCTGCTTCTTTCAGGCGGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGaa                                         <  2:1210700/236‑1 (MQ=255)
                                                                                                                                                                                                               cttcttTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCgg                                                                                               <  2:1742792/172‑1 (MQ=255)
                                                                                                                                                                                                               cttcttTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCgg                                                                                               >  1:1742792/1‑172 (MQ=255)
                                                                                                                                                                                                               cttcttTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATgcg                             >  1:1492838/1‑238 (MQ=255)
                                                                                                                                                                                                               cttcttTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGGTTGGGTTTAGCCAGTCCAGGCTGGGGTTTGGCTGTTTCTGGGTGTTAAATTCAATCTGGTCGGCCATCTGTAGCTGGTAGGTGTACGGCACAATgcg                             >  2:540077/1‑238 (MQ=255)
                                                                                                                                                                                                                  cttTCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGcc                                                              <  1:963569/202‑1 (MQ=255)
                                                                                                                                                                                                                   tttCAGGCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGaa                                         <  1:827302/222‑1 (MQ=255)
                                                                                                                                                                                                                         gCTGATCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAAttt                  >  1:69318/1‑239 (MQ=255)
                                                                                                                                                                                                                             aTCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGCGGTTTGGGTTTAACCAGTCACGGCTGGGGTTAGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTg               >  1:972109/1‑238 (MQ=255)
                                                                                                                                                                                                                             aTCCCCAGATGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTg               >  1:1192760/1‑238 (MQ=255)
                                                                                                                                                                                                                                     aTGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCCATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCCATTTTTGCCCCGATg       >  2:733593/1‑238 (MQ=255)
                                                                                                                                                                                                                                      tGTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATg       <  1:1232452/237‑1 (MQ=255)
                                                                                                                                                                                                                                       tttCCGGCTGGTCGTCAAGGATTTGCCCCCCAGCCAGAATTTTTTTGTCACGGTCCTGTTTACGGACCCGGGCGTGATTTTTCGAACCCCCACGGCTGGTTGTGACGTACCCGAGGTTTGGGTTTACCCAGTCACGGCGGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTGGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATGCAg    <  2:1732628/238‑1 (MQ=255)
                                                                                                                                                                                                                                       gTTCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATGCAg    <  1:783474/239‑1 (MQ=255)
                                                                                                                                                                                                                                         tCCGGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACTGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATGCAGCg  >  1:1238239/1‑239 (MQ=255)
                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                           
TTATCTTTACTGCGGTTTTGCGGCGTGTAGCTTTTTTGCTGAAGTTGCTTCAGCGCGGCGGCGTCCTGCTCTTCGGCACT‑CGGCTTATTAAATTGCGATTGCAGGAAGTTCACCATCTG‑ATTGAGACGGATATCCCCGCCACCAATCGCCGCCAGCAACTCGTCGACATCATTGAAGTTGTAACGCGGCAGCAGATGTTTTTCTGCTTCTTTCAGGCTGATCCCCAGATGTTCCAGCTCGTCGTCAAGGATTTGCCGCCCAGCCAGAATGTTTTTGTCACGGTCCTGTTTACGGAACCAGGCGTGAATTTTCGAACGCCCACGGCTGGTTGTGACGTAACCGAGGTTTGGGTTTAACCAGTCACGGCTGGGGTTCGGCTGTTTCTGGGTGATAATTTCAATCTGGTCGCCCATCTGCAGCTGGTAGGTGAACGGCACAATGCGCCCGCCAATTTTTGCCCCGATGCAGCG  >  NC_007779/2910527‑2910996

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A