Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F1 I2 R1 772 77.0 3769570 91.6% 3452926 105.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,516,104 T→C K401K (AAA→AAG)  damX ← cell division protein that binds to the septal ring

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,516,1040TC100.0% 246.2 / NA 70K401K (AAA→AAG) damXcell division protein that binds to the septal ring
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (34/36);  total (34/36)

GCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAG  >  NC_000913/3515969‑3516236
                                                                                                                                          |                                                                                                                                    
gcgcTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCcttt                                                                                                                                   >  2:1359762/1‑139 (MQ=255)
   cTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGACCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTc                                                                                                                                >  1:1357898/1‑139 (MQ=255)
            aCTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCtcttct                                                                                                                       >  2:950699/1‑139 (MQ=255)
                ccGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCg                                                                                                                   <  1:1069547/139‑1 (MQ=255)
                  gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGaa                                                                                                                 <  1:963217/139‑1 (MQ=255)
                  gCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGaa                                                                                                                 <  1:26058/139‑1 (MQ=255)
                            aCCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGc                                                                                                       >  1:1511715/1‑139 (MQ=255)
                                ttGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGa                                                                                                   >  1:332410/1‑139 (MQ=255)
                                 tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTa                                                                                                            >  2:1748391/1‑132 (MQ=255)
                                 tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGACGCAGCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTa                                                                                                            <  1:1748391/132‑1 (MQ=255)
                                 tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           <  2:519276/114‑1 (MQ=255)
                                 tGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           >  1:519276/1‑114 (MQ=255)
                                       agaTAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAgg                                                                                            >  2:1439008/1‑139 (MQ=255)
                                        gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           <  1:950699/139‑1 (MQ=255)
                                        gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           <  2:10638/139‑1 (MQ=255)
                                        gaTAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           <  1:1359762/139‑1 (MQ=255)
                                        gaTAACCTTGATTACTTCAGATCGGCCTGAACCTGAC‑‑‑GCAGCGGTGTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTGTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           >  1:1083997/1‑139 (MQ=255)
                                          tAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACa                                                                                         >  1:1490237/1‑139 (MQ=255)
                                           aaCCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           >  1:1082641/1‑104 (MQ=255)
                                           aaCCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           <  2:1082641/104‑1 (MQ=255)
                                           aaCCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAAc                                                                                                >  1:1418514/1‑131 (MQ=255)
                                           aaCCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAAc                                                                                                <  2:1418514/131‑1 (MQ=255)
                                             ccTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATAc                                                                                      <  2:1357898/139‑1 (MQ=255)
                                                 gATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCcttt                                                                                                                                   <  2:274349/90‑1 (MQ=255)
                                                 gATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCcttt                                                                                                                                   >  1:274349/1‑90 (MQ=255)
                                                 gATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTcttctt                                                                                                                      >  2:1559053/1‑103 (MQ=255)
                                                 gATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTcttctt                                                                                                                      <  1:1559053/103‑1 (MQ=255)
                                                   tctgaagtaaTCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg                                                                                 >  1:744452/10‑138 (MQ=255)
                                                   tctgaagtaaTCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACgg                                                                                 <  2:744452/129‑1 (MQ=255)
                                                            aTCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           >  2:1639229/1‑87 (MQ=255)
                                                            aTCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCctc                                                                                                                           <  1:1639229/87‑1 (MQ=255)
                                                                 ccTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCa                                                                                    <  2:1516128/121‑1 (MQ=255)
                                                                 ccTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCa                                                                                    >  1:1516128/1‑121 (MQ=255)
                                                                 ccTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgt                                                                  >  2:735967/1‑139 (MQ=255)
                                                                  cTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 <  2:332410/139‑1 (MQ=255)
                                                                  cTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 <  2:621431/139‑1 (MQ=255)
                                                                     tACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGtt                                                              >  1:1676702/1‑139 (MQ=255)
                                                                       ccTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTc                                                            <  2:1490237/139‑1 (MQ=255)
                                                                          gAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATa                                                         <  2:1083997/139‑1 (MQ=255)
                                                                           aC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAg                                                        >  2:1403476/1‑139 (MQ=255)
                                                                           aC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAg                                                        >  1:1015913/1‑139 (MQ=255)
                                                                                  aGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 >  1:1028500/1‑126 (MQ=255)
                                                                                  aGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 <  2:1028500/126‑1 (MQ=255)
                                                                                  aGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa                                                       <  1:1828408/136‑1 (MQ=255)
                                                                                  aGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa                                                       >  2:1828408/1‑136 (MQ=255)
                                                                                    cGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           >  1:647106/1‑98 (MQ=255)
                                                                                    cGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGa                                                                                           <  2:647106/98‑1 (MQ=255)
                                                                                        ttCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGt                                              <  2:1676702/139‑1 (MQ=255)
                                                                                              cACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCa                                        <  2:1015913/139‑1 (MQ=255)
                                                                                                      tttGGCCTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTCCACGCCa                                                                                                     >  2:1119114/1‑70 (MQ=255)
                                                                                                      tttGGCCTGGACATCTGCTGGCAATGTAGATACCGCCGTTTTTGCCTCTTCTTTCGAAGCGTACACGCCa                                                                                                     <  1:1119114/70‑1 (MQ=255)
                                                                                                            cTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTaca                                                                                                          >  2:708071/1‑59 (MQ=255)
                                                                                                            cTGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTaca                                                                                                          <  1:708071/59‑1 (MQ=255)
                                                                                                             tGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGAt                                     <  1:674794/127‑1 (MQ=255)
                                                                                                             tGGACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGAt                                     >  2:674794/1‑127 (MQ=255)
                                                                                                              ggACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTc                                         <  2:395117/122‑1 (MQ=255)
                                                                                                              ggACATCTGCTGGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTc                                         >  1:395117/1‑122 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGa                                                                                                   <  2:662194/58‑1 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGa                                                                                                   >  1:662194/1‑58 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 >  2:794742/1‑92 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 <  1:794742/92‑1 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa                                                       <  1:198769/102‑1 (MQ=255)
                                                                                                                    ctgctgGCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGa                                                       >  2:198769/1‑102 (MQ=255)
                                                                                                                         ggCAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCa             <  1:735967/139‑1 (MQ=255)
                                                                                                                           cAATGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAgg           <  1:1439008/139‑1 (MQ=255)
                                                                                                                              tGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 >  2:257056/1‑82 (MQ=255)
                                                                                                                              tGTAGATACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGcgtc                                                                 <  1:257056/82‑1 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGccc                      >  1:1857593/1‑119 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGccc                      >  1:1508119/1‑119 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGccc                      <  2:1857593/119‑1 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGccc                      <  2:1508119/119‑1 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAg  >  1:1214078/1‑139 (MQ=255)
                                                                                                                                    tACCGCCTTTTTCGCCTATTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCAGTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAg  >  2:1173578/1‑139 (MQ=255)
                                                                                                                                          |                                                                                                                                    
GCGCTTCAGGCAACTCCCGCAACGATAAACCATTGCGGGAGATAACCTTGATTACTTCAGATCGGCCTGTACCTGAC‑‑‑GCAGCGGTTTCGCCCACGGGTTTTTGGCCTGGACATCTGCTGGCAATGTAGATACCGCTTTTTTCGCCTCTTCTTTCGAAGCGTACACGCCAGAAACCAGGACATACCACGGCTGACCATTACGCGTCGTTTCATAGACAACGTAGTTTTTCAGATTCTCTTTCTTCGCCCAACCGTTCAGGTTGTCGTAG  >  NC_000913/3515969‑3516236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A