Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A12 F1 I1 R1
|
760 |
58.2 |
3022526 |
90.8% |
2744453 |
102.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
3,862,524 |
Δ3 bp |
pseudogene (1078‑1080/1617 nt) |
glvC ← |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 3862523 | 8 (0.140) | 71 (1.230) |
52/202 |
0.1 |
89.9% |
pseudogene (1081/1617 nt) |
glvC |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
| ? | NC_000913 |
3862527 = |
8 (0.140) | pseudogene (1077/1617 nt) |
glvC |
pseudogene, arbutin specific enzyme IIC component of PTS,enzyme, Transport of small molecules: Carbohydrates, organic acids, alcohols, PTS system, arbutin‑like IIB component, PTS system, arbutin‑like IIC component |
TGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTC‑AATCAGACCTCCGCCCATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3862386‑3862523
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTA > NC_000913/3862527‑3862657
TGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCA > 1:1324331/1‑139
ACCACGAAGTACAGCAGGGTAAAGCACGACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAA < 1:300345/139‑1
ACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAA > 2:960458/1‑139
CAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACAAAAGAGATACATTA < 2:562180/139‑1
AGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGT < 1:60225/139‑1
GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTA > 1:365109/1‑133
GGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTA < 2:365109/133‑1
TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGAC > 2:1155715/1‑139
TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGAC > 2:650806/1‑139
TAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGAC > 2:728993/1‑139
AGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATT > 2:1040407/1‑139
ACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTTACCACACCAAAGAGATACATTACGGTCGACATTGAG < 1:960458/139‑1
AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCA < 1:962798/105‑1
AACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCA > 2:962798/1‑105
AATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACA > 1:1261991/1‑115
AATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACA < 2:1261991/115‑1
TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC > 1:62528/1‑139
TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGA < 2:844279/109‑1
TGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGA > 1:844279/1‑109
GGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCA < 2:62528/139‑1
CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 1:1040407/139‑1
CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACAC < 1:851458/98‑1
CGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACAC > 2:851458/1‑98
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTATTC‑AATCAGACCTCCG‑TCATGTTCAGCACACCAAGGAGATACATTACAGTCGACATTGAGGCCGGCAGCACGGC < 2:802842/139‑1
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGC > 1:771509/1‑139
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC > 2:509079/1‑134
ATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGC < 1:509079/134‑1
TGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTG < 2:342931/139‑1
GGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTA < 2:771509/139‑1
TCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG > 2:1378103/1‑130
TCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACG < 1:1378103/130‑1
ATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAG < 2:1150286/139‑1
ATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCA < 1:728993/139‑1
GTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAA > 2:438010/1‑139
GTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAA > 2:914278/1‑139
TGAACATCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAAC < 2:375236/139‑1
CATCTGGATCCAGTTTTGCGGTAAAACTTAGTCAAATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGG < 2:968886/80‑1
CATCGGGATCCAGTTTTGCGGTAAAACTTAGTCAAATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGG > 1:968886/1‑80
TCGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAG > 1:500218/1‑139
CGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGG > 2:1121206/1‑139
CGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGC > 1:401791/1‑101
CGGGATCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGC < 2:401791/101‑1
TCCAGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAAT > 2:1267430/1‑139
AGTTTTGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCC < 1:1155715/139‑1
TGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG < 1:438010/139‑1
TGCGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGG > 1:440127/1‑139
CGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTT > 1:780603/1‑139
CGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAA > 1:53208/1‑116
CGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAA < 2:53208/116‑1
CGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAA > 1:254895/1‑98
CGGTAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAA < 2:254895/98‑1
TAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG > 1:1118766/1‑139
TAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 1:1267430/139‑1
TAAAACTTAGTC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGG < 2:1118766/139‑1
TC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA > 1:485786/1‑98
TC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAA < 2:485786/98‑1
TC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC > 1:193149/1‑70
TC‑AATCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCAC < 2:193149/70‑1
TCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCAC < 2:491332/135‑1
TCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCAC > 1:491332/1‑135
TCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCC > 1:588558/1‑133
TCAGACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCC < 2:588558/133‑1
ACCTCCG‑CCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGG < 2:780603/139‑1
cgCCATGTTCACCACACCAAAGAGATACATTACGGTCGAGATTGAGGCCGCCAGCACGGC < 2:887298/58‑1
cgCCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTT < 1:1121206/137‑1
cgCCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGC > 1:887298/3‑60
cgCCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCG < 1:177422/48‑1
cgCCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCG > 2:177422/3‑50
gCCATGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTA > 1:1225189/2‑139
TGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACG < 2:650989/75‑1
TGTTCACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACG > 1:650989/1‑75
TGTGCGGAAAACCACGAAGTACAGCAGGGTAAAGCACAACCCAATGGCGATTTGGGTCAGCATCATATCCGCGTGGTTGCTGAACATCGGGATCCAGTTTTGCGGTAAAACCTAGTC‑AATCAGACCTCCGCCCATGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3862386‑3862523
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCACACCAAAGAGATACATTACGGTCGACATTGAGGCCGCCAGCACGGCGTGTACCGCAAACAGCAACGGTGAAATGAACAGGAAGGTAAATTCCAGCGGTTCGGTAATTCCCACCAGCATGGCGGTTA > NC_000913/3862527‑3862657
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
