Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F1 I1 R1
|
759 |
65.2 |
3386260 |
90.7% |
3071337 |
101.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,185,000 |
T→C |
V54A (GTC→GCC) |
yqiC → |
BMFP family putative fusogenic protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,185,000 | 0 | T | C | 100.0%
| 321.4
/ NA
| 89 | V54A (GTC→GCC) | yqiC | BMFP family putative fusogenic protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (40/49); total (40/49) |
AAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAA > NC_000913/3184865‑3185122
|
aaaTCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCa < 1:220300/139‑1 (MQ=255)
gAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGa < 1:746031/139‑1 (MQ=255)
aaTGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc < 1:295072/124‑1 (MQ=255)
aaTGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc > 2:295072/1‑124 (MQ=255)
aaTGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGt > 1:714289/1‑139 (MQ=255)
tGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGa > 1:194215/1‑139 (MQ=255)
tGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGa < 2:724716/139‑1 (MQ=255)
tAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGaaaaa < 2:1140302/139‑1 (MQ=255)
gAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc < 2:591473/139‑1 (MQ=255)
gAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc < 2:194215/139‑1 (MQ=255)
tCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcgc < 2:778500/138‑1 (MQ=255)
tCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcgc > 1:778500/1‑138 (MQ=255)
tCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgct > 2:319289/1‑139 (MQ=255)
tCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgct > 1:1398947/1‑139 (MQ=255)
tCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgct > 2:921921/1‑139 (MQ=255)
ggAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGccc > 1:352528/1‑95 (MQ=255)
ggAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCtt > 2:1486713/1‑139 (MQ=255)
ttCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAg > 2:1184032/1‑100 (MQ=255)
ttCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAg < 1:1184032/100‑1 (MQ=255)
ttCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAAc > 2:1591688/1‑139 (MQ=255)
cGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTg < 2:158246/134‑1 (MQ=255)
cGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTg > 1:158246/1‑134 (MQ=255)
cGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaa < 1:1486713/139‑1 (MQ=255)
aTGTGGAGAAAAAAATCCGCCAAACCCTACAGGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcg < 1:939776/119‑1 (MQ=255)
aTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCaa > 1:204818/1‑89 (MQ=255)
aTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCaa < 2:204818/89‑1 (MQ=255)
aTGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcg > 2:939776/1‑119 (MQ=255)
gagaAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAg > 2:1437082/1‑85 (MQ=255)
gagaAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAg < 1:1437082/85‑1 (MQ=255)
gagaAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAg < 2:1618530/134‑1 (MQ=255)
gagaAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAg > 1:1618530/1‑134 (MQ=255)
aaaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaa > 2:1670721/1‑121 (MQ=255)
aaaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACaa < 1:1670721/121‑1 (MQ=255)
aaaaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaa < 2:602256/139‑1 (MQ=255)
aaaTCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACTGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa < 2:30045/139‑1 (MQ=255)
tCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg < 2:1176324/139‑1 (MQ=255)
tCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg < 1:1591688/139‑1 (MQ=255)
cGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa < 2:714289/139‑1 (MQ=255)
cGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa < 1:319289/139‑1 (MQ=255)
gCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctgct < 2:709103/106‑1 (MQ=255)
gCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCgctgct > 1:709103/1‑106 (MQ=255)
gCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg > 2:791091/1‑136 (MQ=255)
gCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCg < 1:791091/136‑1 (MQ=255)
aaCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACt < 1:921921/139‑1 (MQ=255)
aCAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc < 2:1450950/90‑1 (MQ=255)
aCAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgc > 1:1450950/1‑90 (MQ=255)
aGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaa < 2:245283/139‑1 (MQ=255)
gcgcAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCaaaa > 1:1173166/1‑139 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc > 1:1211261/1‑57 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc < 2:1211261/57‑1 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa < 2:491235/121‑1 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCa > 1:491235/1‑121 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTga > 2:1410741/1‑128 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTga < 1:1410741/128‑1 (MQ=255)
cAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAagc > 2:1538613/1‑139 (MQ=255)
cTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc < 2:212266/54‑1 (MQ=255)
cTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTc > 1:212266/1‑54 (MQ=255)
cTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGTAGTACTGAGATCAAAAagcagc > 2:923778/1‑139 (MQ=255)
gACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa < 2:1413382/139‑1 (MQ=255)
cgcgCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGa > 2:1081231/1‑139 (MQ=255)
cgcCTCGACCTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGTAGTACTGAGATCAAAAAGCAGCCAGATc < 1:923778/139‑1 (MQ=255)
ccTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGAct < 2:1173166/139‑1 (MQ=255)
ccTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGAct < 1:1081231/139‑1 (MQ=255)
ccTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGAct < 2:1398947/139‑1 (MQ=255)
cTTGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGActc < 1:1538613/139‑1 (MQ=255)
tGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa > 2:262216/1‑96 (MQ=255)
tGTAAGCCGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaaaa < 1:262216/96‑1 (MQ=255)
cGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGActct < 1:128009/131‑1 (MQ=255)
cGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGActct > 2:128009/1‑131 (MQ=255)
cGTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCaa > 2:543679/1‑139 (MQ=255)
gTGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACAGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCa > 2:1015510/1‑137 (MQ=255)
gTGAAGAGTTCGACGCCCAAACGCAACTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCa < 1:1015510/137‑1 (MQ=255)
tGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACt > 2:1616297/1‑40 (MQ=255)
tGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACt < 1:1616297/40‑1 (MQ=255)
tGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaa > 2:1444813/1‑85 (MQ=255)
tGAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGaa < 1:1444813/85‑1 (MQ=255)
gacgagTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa > 1:255145/4‑65 (MQ=255)
gAAGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa < 2:255145/65‑1 (MQ=255)
aaGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGActct < 1:1411462/127‑1 (MQ=255)
aaGAGTTCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGActct > 2:1411462/1‑127 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTgg > 1:1355750/1‑46 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTgg < 2:1355750/46‑1 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcg > 1:864035/1‑48 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGgcg < 2:864035/48‑1 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa > 1:817269/1‑108 (MQ=255)
ttCGACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCa < 2:817269/108‑1 (MQ=255)
gACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa < 1:896031/56‑1 (MQ=255)
gACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACa > 2:896031/1‑56 (MQ=255)
gACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCaa < 1:849415/127‑1 (MQ=255)
gACGCCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCaa > 2:849415/1‑127 (MQ=255)
|
AAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCGCTGCTTGAACAAAGAATCAGCGAACTGGAAAATCGCAGTACTGAGATCAAAAAGCAGCCAGATCCAGAGACTCTCCCCCCAA > NC_000913/3184865‑3185122
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
