Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F1 I1 R1
|
757 |
76.1 |
3598070 |
93.4% |
3360597 |
108.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,792,826 |
C→T |
*286* (TAG→TAA) |
yibB ← |
YibB family protein, function unknown |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,792,826 | 0 | C | T | 100.0%
| 371.5
/ NA
| 113 | *286* (TAG→TAA) | yibB | YibB family protein, function unknown |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (58/55); total (58/55) |
Only 100 of 113 total aligned reads displayed.
TACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACCTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTGTAA > NC_000913/3792699‑3792958
|
tACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGa > 2:152283/1‑139 (MQ=255)
gCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAAtt > 2:1022423/1‑139 (MQ=255)
gCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAg > 2:1406222/1‑139 (MQ=255)
gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCa < 1:720490/128‑1 (MQ=255)
gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCa > 2:720490/1‑128 (MQ=255)
gattgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtt > 2:83314/1‑139 (MQ=255)
attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAgg > 1:977444/1‑117 (MQ=255)
attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAttt > 1:716817/1‑139 (MQ=255)
attgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAttt > 2:378194/1‑139 (MQ=255)
ttgattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt < 2:716817/139‑1 (MQ=255)
gattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg < 1:1022423/139‑1 (MQ=255)
gattTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg < 2:817974/139‑1 (MQ=255)
aCTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgc > 1:1748519/1‑120 (MQ=255)
aCTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgc < 2:1748519/120‑1 (MQ=255)
cTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTaa < 2:506873/139‑1 (MQ=255)
ttGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt < 2:1298508/139‑1 (MQ=255)
ttGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt > 1:1581522/1‑139 (MQ=255)
atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt < 1:769554/137‑1 (MQ=255)
atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt > 2:769554/1‑137 (MQ=255)
atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt > 1:1561293/1‑137 (MQ=255)
atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGtt < 2:1561293/137‑1 (MQ=255)
atatAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTAc > 2:645059/1‑139 (MQ=255)
aGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAag > 2:227136/1‑139 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcg < 2:430228/102‑1 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcg > 1:430228/1‑102 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca > 1:327389/1‑139 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca > 1:81708/1‑139 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca > 2:1124792/1‑139 (MQ=255)
aaaaaaTGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca > 1:1252665/1‑139 (MQ=255)
aaGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGaaa > 1:1342160/1‑131 (MQ=255)
aaGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGaaa < 2:1342160/131‑1 (MQ=255)
tttttCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGaa > 2:1384487/1‑69 (MQ=255)
tCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCctc < 1:152283/139‑1 (MQ=255)
ccTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg < 1:1605931/87‑1 (MQ=255)
ccTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg > 2:1605931/1‑87 (MQ=255)
tATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTcc < 2:336976/139‑1 (MQ=255)
tATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTcc < 1:1124792/139‑1 (MQ=255)
aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt > 1:1237766/1‑82 (MQ=255)
aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt < 2:1237766/82‑1 (MQ=255)
aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc > 2:1063303/1‑133 (MQ=255)
aTCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc < 1:1063303/133‑1 (MQ=255)
tctcAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt < 1:1494168/95‑1 (MQ=255)
tcAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg < 2:1252665/139‑1 (MQ=255)
aGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg < 1:508598/137‑1 (MQ=255)
ttGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAg > 2:176924/1‑139 (MQ=255)
tGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt < 1:227136/139‑1 (MQ=255)
tGGTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt < 2:1225146/139‑1 (MQ=255)
gTATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGttt < 2:81708/139‑1 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt > 1:765630/1‑71 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCAtttt < 2:765630/71‑1 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTa > 1:1101105/1‑79 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTa < 2:1101105/79‑1 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc > 2:415784/1‑122 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTcc < 1:415784/122‑1 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTa > 2:8642/1‑139 (MQ=255)
tATCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTa > 2:587021/1‑139 (MQ=255)
aTCAAAACGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAg > 2:1148004/1‑139 (MQ=255)
aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt < 2:743114/79‑1 (MQ=255)
aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt > 1:743114/1‑79 (MQ=255)
aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt < 2:1288499/130‑1 (MQ=255)
aaCGCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGAGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATCGt > 1:1288499/1‑130 (MQ=255)
aaCGCTA‑CCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGaa > 2:659637/1‑139 (MQ=255)
gCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcgc < 2:628392/53‑1 (MQ=255)
gCTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAgcgc > 1:628392/1‑53 (MQ=255)
cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTg > 2:11518/1‑63 (MQ=255)
cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTGCCCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAaga > 1:1455831/1‑139 (MQ=255)
cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAagag > 1:487725/1‑139 (MQ=255)
cTACCCACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAagag > 1:1005097/1‑139 (MQ=255)
ccACTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCg < 1:1311985/139‑1 (MQ=255)
aCTAATGGAGGGAAACTTATTTTCTTTAAAGGAAAATACTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg < 1:1145335/139‑1 (MQ=255)
aCTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg < 2:1005097/139‑1 (MQ=255)
aCTAATGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCggg < 1:587021/139‑1 (MQ=255)
tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGc < 2:1321199/136‑1 (MQ=255)
tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGc > 1:1321199/1‑136 (MQ=255)
tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt < 1:1148004/139‑1 (MQ=255)
tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt < 1:204634/139‑1 (MQ=255)
tGGAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt < 1:733587/139‑1 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt > 1:1382264/1‑62 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtgt < 2:1382264/62‑1 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca < 1:1420456/75‑1 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAagca > 2:1420456/1‑75 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt > 2:1237363/1‑113 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGt < 1:1237363/113‑1 (MQ=255)
gAGGGAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTg > 2:1402771/1‑139 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAgtg < 2:170507/58‑1 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAg > 1:383831/1‑56 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAg < 2:383831/56‑1 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACaaa > 2:359343/1‑82 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACaaa < 1:359343/82‑1 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg > 1:21311/1‑85 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg < 2:21311/85‑1 (MQ=255)
ggAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCct > 1:218627/1‑97 (MQ=255)
gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGaa < 2:565777/86‑1 (MQ=255)
gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGaa > 1:565777/1‑86 (MQ=255)
gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg < 1:1104607/104‑1 (MQ=255)
gAAACTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAg > 2:1104607/1‑104 (MQ=255)
aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCg < 2:855936/83‑1 (MQ=255)
aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTc > 1:1421128/1‑93 (MQ=255)
aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTc < 2:1421128/93‑1 (MQ=255)
aaaCTTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGtt > 1:743812/1‑132 (MQ=255)
|
TACAGTTTTGGCTGGGCATAATGATGATTGATTTTACTGCATTGATATAAAAAGAAAAAATGATGCCAAAGCATCATTTTTCCTATCTCAGTTGGTATCAAAACGCTACCCACTAATGGAGGGAAACCTATTTTCTTGAAAGGAAAATTCTCAGCGCCTGCATTTTTG‑CCCCTAAAGTGTTACTCCTGAAGCAGCGAAACAAATCGAACCATTTTCCTCTCCCCAGATAGTTTAGGTTGAAGAGATCGGGGCGTTTGTAA > NC_000913/3792699‑3792958
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
