Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F28 I1 R1 169 80.7 2736954 99.0% 2709584 138.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,875,172 T→C D83G (GAC→GGC)  cysN ← sulfate adenylyltransferase subunit 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,875,1720TC100.0% 214.0 / NA 60D83G (GAC→GGC) cysNsulfate adenylyltransferase subunit 1
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (31/29);  total (31/29)

GCCAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCG  >  NC_000913/2875039‑2875306
                                                                                                                                     |                                                                                                                                      
gcCAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCccacca                                                                                                                                  >  1:1112192/1‑140 (MQ=255)
 ccAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACcag                                                                                                                                 <  1:938078/140‑1 (MQ=255)
 ccAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACcag                                                                                                                                 <  1:959127/140‑1 (MQ=255)
  cAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACcagc                                                                                                                                <  2:375788/140‑1 (MQ=255)
   aGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACcagca                                                                                                                               <  2:46037/140‑1 (MQ=255)
        ccATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGcc                                                                                                                          <  1:1305071/140‑1 (MQ=255)
                   gtgtACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCtt                                                                                                               >  1:787353/1‑140 (MQ=255)
                    tgtACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCttt                                                                                                              <  2:1347121/140‑1 (MQ=255)
                     gtACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCtttt                                                                                                             >  2:424843/1‑140 (MQ=255)
                      tACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTc                                                                                                            >  1:929730/1‑140 (MQ=255)
                      tACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTc                                                                                                            >  1:541821/1‑140 (MQ=255)
                        cTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGc                                                                                                          <  2:929730/140‑1 (MQ=255)
                         tGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGcc                                                                                                         <  2:241212/140‑1 (MQ=255)
                          gCTCGTGCCCTGGGGGGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGccc                                                                                                        >  2:144539/1‑140 (MQ=255)
                             cGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTgg                                                                                                     >  1:219784/1‑140 (MQ=255)
                              gTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTggg                                                                                                    >  1:1066839/1‑140 (MQ=255)
                                gCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTg                                                                                                  >  1:955466/1‑140 (MQ=255)
                                gCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTg                                                                                                  >  2:566468/1‑140 (MQ=255)
                                gCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGAAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCTGAGCCCGATCCAGCTTTTCGCCCTGGGTg                                                                                                  >  2:794434/1‑140 (MQ=255)
                                    tGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGt                                                                                              <  1:566468/140‑1 (MQ=255)
                                    tGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGt                                                                                              <  2:384913/140‑1 (MQ=255)
                                     ggggTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTc                                                                                                            >  1:1008700/1‑125 (MQ=255)
                                     ggggTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTc                                                                                                            <  2:1008700/125‑1 (MQ=255)
                                     ggggTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTg                                                                                             <  2:1090495/140‑1 (MQ=255)
                                           tCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCtt                                                                                       >  1:368021/1‑140 (MQ=255)
                                            cGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTa                                                                                      >  1:310473/1‑140 (MQ=255)
                                            cGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTa                                                                                      <  2:649569/140‑1 (MQ=255)
                                             ggCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTAc                                                                                     <  1:53976/140‑1 (MQ=255)
                                                  taataaATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCg                                                                                <  2:955466/140‑1 (MQ=255)
                                                  taataaATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCg                                                                                <  2:362779/140‑1 (MQ=255)
                                                      aaaTTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTAt                                                                            <  1:144539/140‑1 (MQ=255)
                                                            aCGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCg                                                                      >  1:1252904/1‑140 (MQ=255)
                                                            aCGCTTCTCGGAAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCg                                                                      >  2:320446/1‑140 (MQ=255)
                                                              gCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGAt                                                                    <  1:424843/140‑1 (MQ=255)
                                                                  ctcGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATgaga                                                                >  2:670309/1‑140 (MQ=255)
                                                                      gTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCACACCAGCAGAGCCAGATCCAGCTGTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTg                                                            <  2:772053/140‑1 (MQ=255)
                                                                            aaaTAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTc                                                      >  1:1048605/1‑140 (MQ=255)
                                                                              aTAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGt                                                    >  1:968336/1‑140 (MQ=255)
                                                                               tAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTa                                                   >  1:962655/1‑140 (MQ=255)
                                                                                 gCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGa                                                 >  2:1164630/1‑140 (MQ=255)
                                                                                 gCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGa                                                 >  2:530341/1‑140 (MQ=255)
                                                                                 gCGGTAGGCCACGTCAAT‑GTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAt                                                <  2:472773/140‑1 (MQ=255)
                                                                                  cGGTAGGCTACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAt                                                <  1:320446/140‑1 (MQ=255)
                                                                                   ggTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAtt                                               >  2:190422/1‑140 (MQ=255)
                                                                                      aGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTgg                                            <  2:1048605/140‑1 (MQ=255)
                                                                                       ggCCACGTCAATGGTGATGCCCTGTTCGTGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGc                                           >  2:243574/1‑140 (MQ=255)
                                                                                            cGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAt                                                <  2:196807/130‑1 (MQ=255)
                                                                                            cGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGAt                                                >  1:196807/1‑130 (MQ=255)
                                                                                            cGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTa                                      <  2:962655/140‑1 (MQ=255)
                                                                                                  tGGTGATGCCCTGTTCGTGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgc                                <  1:243574/140‑1 (MQ=255)
                                                                                                  tGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgc                                <  2:682351/140‑1 (MQ=255)
                                                                                                      gATGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTgcagca                            <  2:1112192/140‑1 (MQ=255)
                                                                                                       aTGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTa                                      <  1:868747/129‑1 (MQ=255)
                                                                                                       aTGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTa                                      >  2:868747/1‑129 (MQ=255)
                                                                                                       aTGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGcagcag                           >  2:1001300/1‑140 (MQ=255)
                                                                                                        tGCCCTGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAga                          <  2:787353/140‑1 (MQ=255)
                                                                                                             tGTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGAcc                     >  1:191703/1‑140 (MQ=255)
                                                                                                              gTTCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGCGTATCGTGCAGCAGACGACCa                    <  2:968336/140‑1 (MQ=255)
                                                                                                               ttCGCGCTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCaa                   >  2:1044920/1‑140 (MQ=255)
                                                                                                                    gcTCAGCTTGCAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCaga              >  2:1263006/1‑140 (MQ=255)
                                                                                                                              cAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGc    >  1:21087/1‑140 (MQ=255)
                                                                                                                              cAGGCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGGGCAGCAGACGACCAATCAGAGTACcttttc    >  1:1291384/1‑138 (MQ=255)
                                                                                                                                ggCCGCCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGGGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCg  >  1:1262618/1‑140 (MQ=255)
                                                                                                                                     |                                                                                                                                      
GCCAGTCGCCATATTGCGGGTGTACTGCTCGTGCCCTGGGGTGTCGGCGATAATAAATTTACGCTTCTCGGTAGAGAAATAGCGGTAGGCCACGTCAATGGTGATGCCCTGTTCGCGCTCAGCTTGCAGGCCGTCCACCAGCAGAGCCAGATCCAGCTTTTCGCCCTGGGTGCCGTGACGCTTACTGTCGTTATGCAGCGATGAGAGCTGATCTTCGTAGATTTGGCGGGTATCGTGCAGCAGACGACCAATCAGAGTACTTTTGCCG  >  NC_000913/2875039‑2875306

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A