Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	169	80.7	2736954	99.0%	2709584	138.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,422,035	C→T	G237G (GGC→GGT)	yhdY →	putative ABC transporter membrane subunit YhdY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,422,035	0	C	T	100.0%	203.4 / NA	59	G237G (GGC→GGT)	yhdY	putative ABC transporter membrane subunit YhdY
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (28/31); total (28/31)

CGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCAC  >  NC_000913/3421898‑3422171

cGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGgtgt                                                                                                                                        >  2:127737/1‑140 (MQ=255)

        aTCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGt                                                                                                                                >  2:1247305/1‑140 (MQ=255)

        aTCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCAGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGt                                                                                                                                >  1:1222048/1‑140 (MQ=255)

         tCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGtt                                                                                                                               <  1:991764/140‑1 (MQ=255)

          cGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGttt                                                                                                                              <  1:987528/140‑1 (MQ=255)

             tCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTtcag                                                                                                                           >  2:751842/1‑140 (MQ=255)

             tCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTtcag                                                                                                                           <  2:435432/140‑1 (MQ=255)

              cATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTtcagt                                                                                                                          <  1:127737/140‑1 (MQ=255)

                    tATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCat                                                                                                                    <  1:535354/140‑1 (MQ=255)

                     aTCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCata                                                                                                                   <  1:949738/140‑1 (MQ=255)

                       cGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATg                                                                                                                 >  1:153987/1‑140 (MQ=255)

                       cGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATg                                                                                                                 <  1:400685/140‑1 (MQ=255)

                        gAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATga                                                                                                                <  1:419565/140‑2 (MQ=255)

                        gAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGt                                                                                                                <  2:287544/140‑1 (MQ=255)

                          aTTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTg                                                                                                              <  2:153987/140‑1 (MQ=255)

                             cTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCgg                                                                                                           <  1:1240765/140‑1 (MQ=255)

                                gcgcGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCAGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAg                                                                                                        <  2:1222048/140‑1 (MQ=255)

                                      cgTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTg                                                                                                   <  2:871662/139‑1 (MQ=255)

                                      cgTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTg                                                                                                   >  1:871662/1‑139 (MQ=255)

                                       gTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCg                                                                                                 <  2:1236979/140‑1 (MQ=255)

                                       gTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCg                                                                                                 <  1:751842/140‑1 (MQ=255)

                                       gTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCg                                                                                                 <  1:95172/140‑1 (MQ=255)

                                        tGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGa                                                                                                >  2:762367/1‑140 (MQ=255)

                                        tGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGa                                                                                                >  1:1328222/1‑140 (MQ=255)

                                        tGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGa                                                                                                <  1:762367/140‑1 (MQ=255)

                                                     cGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAgg                                                                                   >  1:1254132/1‑140 (MQ=255)

                                                         cTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCt                                                                               <  2:782767/140‑1 (MQ=255)

                                                          tGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCTCTg                                                                              >  1:602338/1‑140 (MQ=255)

                                                          tGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTg                                                                              >  1:713565/1‑140 (MQ=255)

                                                            tttATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGcc                                                                            >  1:1036859/1‑140 (MQ=255)

                                                                      cGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCaa                                                                  >  1:1245379/1‑140 (MQ=255)

                                                                           aTGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGa                                                             <  2:1328222/140‑1 (MQ=255)

                                                                            tgctgcCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGaa                                                            >  2:695765/1‑140 (MQ=255)

                                                                            tgctgcCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAA‑GGCAATATGAAg                                                           >  1:450348/1‑140 (MQ=255)

                                                                                 ccGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGGGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGc                                                       >  2:753248/1‑140 (MQ=255)

                                                                                   gttgttTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCag                                                     >  1:190374/1‑140 (MQ=255)

                                                                                           tGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTg                                             >  1:981775/1‑140 (MQ=255)

                                                                                             gCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGc                                           >  1:29980/1‑140 (MQ=255)

                                                                                              cAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCg                                                >  1:78154/1‑134 (MQ=255)

                                                                                              cAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCg                                                <  2:78154/134‑1 (MQ=255)

                                                                                              cAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCg                                          >  1:1240088/1‑140 (MQ=255)

                                                                                              cAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCg                                          <  2:1254132/140‑1 (MQ=255)

                                                                                               aGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGt                                         <  2:713565/140‑1 (MQ=255)

                                                                                                 aaGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTg                                       >  2:1123299/1‑140 (MQ=255)

                                                                                                 aaGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGCGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTg                                       >  2:916643/1‑140 (MQ=255)

                                                                                                    gCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGt                                    <  2:1245379/140‑1 (MQ=255)

                                                                                                      aCCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCAGCAGAGTCGc                                               <  2:1047249/127‑1 (MQ=255)

                                                                                                      aCCAGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCAGCAGAGTCGc                                               >  1:1047249/1‑127 (MQ=255)

                                                                                                         aGTATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTg                               >  1:645852/1‑140 (MQ=255)

                                                                                                           tATCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGa                             <  2:1036859/140‑1 (MQ=255)

                                                                                                             tCGACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCCCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGaaa                           >  2:594535/1‑140 (MQ=255)

                                                                                                               gACAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAAc                         >  1:1122492/1‑140 (MQ=255)

                                                                                                                aCAAATTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAA‑GGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTc                       <  2:450348/140‑1 (MQ=255)

                                                                                                                  aaaTTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCa                      >  1:161993/1‑140 (MQ=255)

                                                                                                                  aaaTTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCCCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCa                      <  1:594535/140‑1 (MQ=255)

                                                                                                                    aTTGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAgg                    >  2:672270/1‑140 (MQ=255)

                                                                                                                     ttGATCCGCGCGCTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAggg                   <  1:46700/140‑1 (MQ=255)

                                                                                                                             cgcgcTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTa           <  1:695765/140‑1 (MQ=255)

                                                                                                                               cgcTGGTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTAtt         >  2:1227986/1‑140 (MQ=255)

                                                                                                                                    gTTGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGcc    <  2:29980/140‑1 (MQ=255)

                                                                                                                                      tGGTGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCcac  <  1:1123299/140‑1 (MQ=255)

CGTATCTTATCGGTCATTTTTATCGAATTCTGGCGCGGCGTGCCGCTGATTACCGTTCTGTTTATGTCTTCGGTCATGCTGCCGTTGTTTATGGCAGAAGGCACCAGTATCGACAAATTGATCCGCGCGCTGGTTGGCGTGATCCTGTTTCAGTCAGCATATGTTGCGGAAGTCGTGCGAGGTGGATTACAGGCGCTGCCTAAAGGGCAATATGAAGCGGCAGAGTCGCTGGCGTTGGGTTACTGGAAAACTCAGGGGCTGGTTATTCTGCCAC  >  NC_000913/3421898‑3422171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A