Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
228 |
65.7 |
2434974 |
91.7% |
2232871 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,826,581 |
Δ1 bp |
coding (190/960 nt) |
srlE → |
sorbitol‑specific PTS enzyme IIBC1 component |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,826,579 | 0 | A | . | 100.0%
| 290.9
/ NA
| 69 | coding (188/960 nt) | srlE | sorbitol‑specific PTS enzyme IIBC1 component |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (32/37); total (32/37) |
CTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGAAATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAGA > NC_000913/2826440‑2826708
|
cTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGa > 2:448371/1‑140 (MQ=255)
tGAGCTAAACGCCACGCGGGAAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGaat < 2:80684/140‑2 (MQ=255)
cTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGgt > 1:14494/1‑140 (MQ=255)
gAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGgtgt < 1:386471/140‑1 (MQ=255)
cACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGt > 1:428511/1‑140 (MQ=255)
cGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTaa > 2:425189/1‑140 (MQ=255)
cGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCg < 2:650768/140‑1 (MQ=255)
gaaaaaaaaaTCGTCTATACCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGAc < 2:169622/138‑1 (MQ=255)
gAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACt > 2:1190560/1‑140 (MQ=255)
aaaaaaaTCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACtgt < 1:1054942/140‑1 (MQ=255)
aaaTCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTggcg < 1:627658/140‑1 (MQ=255)
aaaTCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTggcg < 1:177251/140‑1 (MQ=255)
aaaTCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTggcg < 2:934928/140‑1 (MQ=255)
aaaTCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTggcg < 2:14494/140‑1 (MQ=255)
gTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGcaca > 1:568373/1‑140 (MQ=255)
atatCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTAc < 2:568373/140‑1 (MQ=255)
gccgGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGGACCCGCGGAAGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGc > 2:1087681/1‑140 (MQ=255)
ccgGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCa > 1:253606/1‑140 (MQ=255)
cgGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCAt < 2:1011516/140‑1 (MQ=255)
cgGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCAt < 2:362482/140‑1 (MQ=255)
ggTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATc > 2:477705/1‑140 (MQ=255)
gTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTAc < 2:287198/128‑1 (MQ=255)
gTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTAc > 1:502289/1‑128 (MQ=255)
gTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTAc < 2:502289/128‑1 (MQ=255)
gTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTAc > 1:287198/1‑128 (MQ=255)
cccGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATc > 2:228954/1‑140 (MQ=255)
cGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCg > 2:953567/1‑140 (MQ=255)
ccTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGaaa > 2:192239/1‑140 (MQ=255)
ccTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGaaa > 1:206311/1‑140 (MQ=255)
ccTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGaa < 1:1168696/139‑1 (MQ=255)
ccTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGaa > 2:1168696/1‑139 (MQ=255)
gCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAacga < 1:192239/140‑1 (MQ=255)
gATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAacgacg < 1:763289/140‑1 (MQ=255)
ttgttgACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTa < 1:477705/140‑1 (MQ=255)
ttgACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTc > 2:668151/1‑140 (MQ=255)
tgACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTcc < 1:668151/140‑1 (MQ=255)
tgACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTcc < 1:401438/140‑1 (MQ=255)
cAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCccac < 1:674632/140‑1 (MQ=255)
cAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCcca < 1:1080137/139‑1 (MQ=255)
cAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCcca > 2:1080137/1‑139 (MQ=255)
ggCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCAACTATCCGAAACGACGTATTCCCACCATGaa > 2:745407/1‑140 (MQ=255)
gCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAat < 2:428511/140‑1 (MQ=255)
cTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCAc > 1:302415/1‑140 (MQ=255)
ttACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCa < 1:17705/138‑1 (MQ=255)
ttACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCa > 2:17705/1‑138 (MQ=255)
ttACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACt > 2:521590/1‑140 (MQ=255)
tggcAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGc < 1:448371/140‑1 (MQ=255)
ggcAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCa > 1:943580/1‑140 (MQ=255)
gcAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCaa > 1:966438/1‑140 (MQ=255)
gcAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCaa > 2:178967/1‑140 (MQ=255)
aGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAgt > 1:985051/1‑140 (MQ=255)
tATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAgtccgg > 1:361346/1‑140 (MQ=255)
ttGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAgtccggtc < 1:811044/140‑1 (MQ=255)
ggATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTg < 1:228954/140‑1 (MQ=255)
gATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTg > 2:1208984/1‑139 (MQ=255)
gATTTAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTg < 1:1208984/139‑1 (MQ=255)
tAAAGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCa < 2:985051/140‑1 (MQ=255)
aaaGAAGGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAg < 1:941341/140‑1 (MQ=255)
aagGTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACa < 1:51316/140‑1 (MQ=255)
ggTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGgc < 2:1174742/130‑1 (MQ=255)
ggTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGgc > 1:1174742/1‑130 (MQ=255)
ggTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACAtt > 2:830044/1‑140 (MQ=255)
ggTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACAtt > 2:184851/1‑140 (MQ=255)
gTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTgg > 1:822996/1‑128 (MQ=255)
gTGAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTgg < 2:822996/128‑1 (MQ=255)
gAACCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATtgtg < 2:966438/140‑1 (MQ=255)
aCCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGa < 1:521590/140‑1 (MQ=255)
aCCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGa < 1:830044/140‑1 (MQ=255)
aCCCGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGa < 1:1087681/140‑1 (MQ=255)
ccGCGGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAg < 1:1190560/140‑1 (MQ=255)
cgcgGAGGCGG‑AATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAGa > 2:567821/1‑140 (MQ=255)
|
CTTGAGCTGAAAGCCACGCCGGGAAAAAAAATCGTCTATATCACCGCCGGTACCCGGCCTGCGATTGTTGACAAACTGGCACAGCTTACTGGCTGGCAGGCTATTGACGGATTTAAAGAAGGTGAACCCGCGGAGGCGGAAATTGGTGTCGCGGTAATCGACTGTGGCGGCACATTACGCTGCGGCATCTATCCGAAACGACGTATTCCCACCATTAATATCCACTCGACGGGCAAGTCCGGTCCGCTGGCGCAGTACATTGTGGAAGA > NC_000913/2826440‑2826708
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
