Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F28 I1 R1
|
228 |
65.7 |
2434974 |
91.7% |
2232871 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,875,245 |
A→G |
intergenic (‑85/‑193) |
dgoR ← / → yidX |
putative DNA‑binding transcriptional regulator DgoR/putative lipoprotein YidX |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,875,245 | 0 | A | G | 100.0%
| 345.8
/ NA
| 96 | intergenic (‑85/‑193) | dgoR/yidX | putative DNA‑binding transcriptional regulator DgoR/putative lipoprotein YidX |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/45); total (51/45) |
GATCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACA > NC_000913/3875110‑3875381
|
gATCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTTTAGTACCAGCGTGATGGCGtt < 1:751732/140‑1 (MQ=255)
tCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTcg < 2:633225/140‑1 (MQ=255)
tGTTTACCCAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTcgcg < 2:475648/140‑1 (MQ=255)
cAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgt < 1:1167579/140‑1 (MQ=255)
aGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtg > 1:41915/1‑140 (MQ=255)
aGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtg > 1:237689/1‑140 (MQ=255)
aGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTA‑CCCGATCGATGCATAACGCGACAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtgc > 2:532670/1‑140 (MQ=255)
gCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGt < 2:1042628/131‑1 (MQ=255)
gCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGt > 1:1042628/1‑131 (MQ=255)
gCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgt > 2:61618/1‑138 (MQ=255)
gCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgt < 1:61618/138‑1 (MQ=255)
cGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtgcg > 2:141198/1‑140 (MQ=255)
gTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtgcgt > 2:75293/1‑140 (MQ=255)
gTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtgcgt < 1:321453/140‑1 (MQ=255)
tAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCcgtgcgtg < 2:532826/140‑1 (MQ=255)
aCAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATg < 2:670775/140‑1 (MQ=255)
aTGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATgtag > 1:422155/1‑140 (MQ=255)
aTGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATgtag > 2:968027/1‑140 (MQ=255)
aTGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATg > 1:232811/1‑137 (MQ=255)
aTGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATg < 2:232811/137‑1 (MQ=255)
tGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATgtagt > 2:348796/1‑140 (MQ=255)
gCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATgtagta < 1:971513/140‑1 (MQ=255)
gATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa > 1:375511/1‑140 (MQ=255)
gATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 2:140100/140‑1 (MQ=255)
gATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 1:968027/140‑1 (MQ=255)
gATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACa < 1:887489/140‑1 (MQ=255)
aTCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaa > 2:118222/1‑140 (MQ=255)
aTCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaa > 1:620702/1‑140 (MQ=255)
aTCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACaa < 2:693447/140‑1 (MQ=255)
cGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAAc > 2:1007236/1‑140 (MQ=255)
gTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACtt > 1:920771/1‑140 (MQ=255)
ttttATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta < 2:41915/140‑1 (MQ=255)
ttttATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta < 2:620702/140‑1 (MQ=255)
ttttATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTta < 1:273482/140‑1 (MQ=255)
ttATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTtata < 1:141198/140‑1 (MQ=255)
tATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTatat < 2:893887/140‑1 (MQ=255)
tATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTatat < 2:957826/140‑1 (MQ=255)
ttGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttg < 2:920771/140‑1 (MQ=255)
agagTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATAttgttg < 1:118222/140‑1 (MQ=255)
gagTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATtgttgt > 1:354332/1‑140 (MQ=255)
agTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGta > 1:456342/1‑140 (MQ=255)
tCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGa > 2:116439/1‑140 (MQ=255)
cTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc < 2:456342/140‑1 (MQ=255)
cTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATc > 1:807280/1‑140 (MQ=255)
tgtgCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcac < 2:422155/140‑1 (MQ=255)
gtgCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATcaca > 1:568970/1‑140 (MQ=255)
tctGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaaaa < 2:807280/140‑1 (MQ=255)
aTGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACa < 2:354332/140‑1 (MQ=255)
tctcTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATa > 1:867864/1‑140 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa > 1:690993/1‑124 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACaaa < 2:690993/124‑1 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAAc < 2:92122/130‑1 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAAc > 1:92122/1‑130 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATaaa > 1:573886/1‑140 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATaaa < 1:1209524/140‑1 (MQ=255)
tctACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCATGCGTGTAATGTAGTACAAACTTATATTGTGGTACTACAATTTAGATCACAAAAAGAACAATGCATaaa > 2:1148061/1‑140 (MQ=255)
aCCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGAc < 1:1181906/140‑1 (MQ=255)
ccccGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGAc < 2:898023/139‑1 (MQ=255)
ccccGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGAc > 1:898023/1‑139 (MQ=255)
ccccGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACa > 2:630995/1‑140 (MQ=255)
ccccGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACa > 2:456667/1‑140 (MQ=255)
ccccGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACa > 2:640630/1‑140 (MQ=255)
cgatcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGc > 1:54210/1‑140 (MQ=255)
cgatcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGc > 1:708373/1‑140 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGAc < 2:539392/134‑1 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGAc > 1:539392/1‑134 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGt > 1:1056096/1‑140 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGt > 2:435021/1‑140 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGt > 1:26987/1‑140 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGt > 1:676186/1‑140 (MQ=255)
atcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGt > 2:1047732/1‑140 (MQ=255)
tcgatGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTc < 2:708373/140‑1 (MQ=255)
atGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCggg > 1:76929/1‑140 (MQ=255)
tGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGc > 2:877514/1‑140 (MQ=255)
gCATAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCa < 1:215205/140‑1 (MQ=255)
aTAACGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGa < 2:76929/140‑1 (MQ=255)
aaCGCGGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGaaa < 2:1056096/140‑1 (MQ=255)
cgcgGCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCAT‑AAAAAATGACATTCGGTGGGCAGGAATCt > 2:137616/1‑140 (MQ=255)
cgcgACAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATc > 2:619691/1‑140 (MQ=255)
ggCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 2:285840/1‑140 (MQ=255)
ggCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 2:917608/1‑140 (MQ=255)
ggCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 1:1084203/1‑140 (MQ=255)
ggCAACTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 1:853307/1‑140 (MQ=255)
ggCAACTTTGTAGTACCAGCGTGATGGCGTTCGCATTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 2:1020097/1‑140 (MQ=255)
aaCTTTGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGaaaa < 2:237689/140‑1 (MQ=255)
ttGTAGTACCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGa < 1:379992/140‑1 (MQ=255)
agtaCCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATc < 1:630995/140‑1 (MQ=255)
aCCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAgg < 2:1084203/140‑1 (MQ=255)
aCCAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAgg < 1:640630/140‑1 (MQ=255)
ccAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa < 1:950928/125‑1 (MQ=255)
ccAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGa > 2:950928/1‑125 (MQ=255)
ccAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGgc > 2:864518/1‑140 (MQ=255)
cAGCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGgcg < 1:877514/140‑1 (MQ=255)
gCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGatat > 2:594122/1‑132 (MQ=255)
gCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGatat < 1:594122/132‑1 (MQ=255)
gCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCt > 2:753484/1‑140 (MQ=255)
gCGTGATGGCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCt > 1:723864/1‑140 (MQ=255)
atggCGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACa < 1:348796/140‑1 (MQ=255)
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GATCTGTTTACCCAGCGTAATGACAATGCGATCGGTTTTATTGAGAGTCATGGAGAGTCCTTGTGCTCTGTATGTTCTTCTCTACTTTACCCCGATCGATGCATAACGCGGCAACTTTGTAGTACCAGCGTGATGACGTTCGCGTTTGCCGTGCGTGTAATGTAGTACAAACTTATATTGTTGTACTACAATTTAGATCACAAAAAGAACAATGCATAAAAAAATGACATGCGTCGGGCAGAAATCTGAAAAGGGATATCAGGCGCTAAACA > NC_000913/3875110‑3875381
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
