Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
252 |
48.5 |
1661298 |
98.8% |
1641362 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,750,728 |
(T)7→6 |
intergenic (‑20/‑103) |
grpE ← / → nadK |
nucleotide exchange factor GrpE/NAD kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,750,722 | 0 | T | . | 98.6%
| 280.1
/ ‑2.0
| 69 | intergenic (‑14/‑109) | grpE/nadK | nucleotide exchange factor GrpE/NAD kinase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (37/31); total (38/31) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.84e-01 |
CGCGGATCCACCTGCTCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCGTTTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTATTG > NC_000913/2750590‑2750855
|
cgcgGATCCACCTGCTCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCGttttttcg > 2:785820/1‑138 (MQ=255)
ggATCCACCTGCTCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCAt < 1:785820/140‑1 (MQ=255)
gCTCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCt > 1:580041/1‑140 (MQ=255)
tCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTaa > 2:171675/1‑140 (MQ=255)
tCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTaa > 1:34755/1‑140 (MQ=255)
tCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTaa > 1:311873/1‑140 (MQ=255)
tCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTACGGGGCTTGCCCCTCAGGCGTTTTCTGATCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTaa > 2:742253/1‑140 (MQ=255)
cagcagAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAAc < 1:531688/140‑1 (MQ=255)
agcagAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACt > 1:185709/1‑140 (MQ=255)
agcagAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACt > 1:154635/1‑140 (MQ=255)
agcagAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACt > 1:309266/1‑140 (MQ=255)
cagAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTc > 2:811699/1‑140 (MQ=255)
gAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGc < 2:385562/140‑1 (MQ=255)
aaGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCt < 2:34755/140‑1 (MQ=255)
gCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCttt > 2:567979/1‑139 (MQ=255)
gCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCtta < 2:362905/140‑1 (MQ=255)
gCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCtta > 1:682307/1‑140 (MQ=255)
tCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGa < 1:798783/140‑1 (MQ=255)
ccTCAATCTCTTCGTGCTGATCTATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGttt < 1:585957/140‑1 (MQ=255)
cTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTc > 1:243210/1‑140 (MQ=255)
tCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCa < 1:246540/140‑1 (MQ=255)
tCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCa < 2:154635/140‑1 (MQ=255)
tCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCa < 1:811699/140‑1 (MQ=255)
cAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAg < 1:681311/140‑1 (MQ=255)
tctcTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGt < 2:756522/140‑1 (MQ=255)
ctctTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGa < 2:803019/126‑1 (MQ=255)
ctctTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGa > 1:803019/1‑126 (MQ=255)
ttCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCa > 1:7968/1‑140 (MQ=255)
tCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCaa > 1:1844/1‑140 (MQ=255)
tGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAggg < 2:580041/140‑1 (MQ=255)
tGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAggg < 2:1844/140‑1 (MQ=255)
tGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAggg > 2:439025/1‑140 (MQ=255)
tGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTAGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAggg < 1:701330/140‑1 (MQ=255)
gCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGa < 1:472507/140‑1 (MQ=255)
gCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGa > 2:129404/1‑140 (MQ=255)
gATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGc > 1:509592/1‑140 (MQ=255)
gATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGc > 2:471151/1‑140 (MQ=255)
gATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGc > 1:564510/1‑140 (MQ=255)
gATCCATGATAATTTCTTCCGGGACTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGc > 1:571515/1‑140 (MQ=255)
ccATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACt < 1:129404/140‑1 (MQ=255)
tGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAg < 1:384186/133‑1 (MQ=255)
tGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAg > 2:384186/1‑133 (MQ=255)
tGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTcac > 1:433930/1‑140 (MQ=255)
tGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTCTCAGGGTTTCAAGGGAAGCACTcac > 2:746626/1‑140 (MQ=255)
aTAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACAt < 2:156733/140‑1 (MQ=255)
aTAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACAt < 2:311873/140‑1 (MQ=255)
aTAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACAt < 2:509592/140‑1 (MQ=255)
aTTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGt > 2:191475/1‑140 (MQ=255)
tGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGcaa > 2:166612/1‑140 (MQ=255)
cAGGCGTTTTCTGTTCTTCACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCtt < 2:171494/128‑1 (MQ=255)
cAGGCGTTTTCTGTTCTTCACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCtt > 1:171494/1‑128 (MQ=255)
aGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGAcc > 1:720589/1‑140 (MQ=255)
ttttCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGa < 2:243210/140‑1 (MQ=255)
ttttCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGa > 1:823995/1‑140 (MQ=255)
ttttCTGTTCTTTACTACTCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGa > 2:428076/1‑140 (MQ=255)
ctCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCAttt > 1:117815/1‑140 (MQ=255)
tCATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTc < 2:664298/140‑1 (MQ=255)
cATGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCa < 2:564510/140‑1 (MQ=255)
tGAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAg < 2:571515/140‑1 (MQ=255)
gAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAgt > 2:140139/1‑140 (MQ=255)
gAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAgt > 1:383502/1‑140 (MQ=255)
gAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAg < 2:614789/139‑1 (MQ=255)
gAATTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAg > 1:614789/1‑139 (MQ=255)
aaTTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAgtg < 2:720589/140‑1 (MQ=255)
aTTTCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAgtgt < 2:433930/140‑1 (MQ=255)
ttCTCCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTAt < 1:471151/140‑1 (MQ=255)
tctcCGCGTTTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTAt > 1:464230/1‑140 (MQ=255)
tctcCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTAtt > 2:747193/1‑140 (MQ=255)
ctcCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTATTg > 1:318704/1‑140 (MQ=255)
ctcCGCG‑TTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTATTg > 1:481385/1‑140 (MQ=255)
|
CGCGGATCCACCTGCTCAGCAGAAGCTTCTGGCTCAACTGCCTCAATCTCTTCGTGCTGATCCATGATAATTTCTTCCGGGGCTTGCCCCTCAGGCGTTTTCTGTTCTTTACTACTCATGAATTTCTCCGCGTTTTTTTCGCATTCATCTCGCTAACTTCGCTTATTATGGGGATCAGTTTCAGGGTTTCAAGGGAAGCACTCACATTGTCATCAATCTTCGCAACAAGGACCTCGGAAAAATGAATAATCATTTCAAGTGTATTG > NC_000913/2750590‑2750855
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
