Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 126 51.4 1736588 99.0% 1719222 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,623,690 A→G T98A (ACC→GCC)  yhhH → PF15631 family protein YhhH

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,623,6900AG100.0% 255.5 / NA 74T98A (ACC→GCC) yhhHPF15631 family protein YhhH
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (31/43);  total (31/43)

GAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT  >  NC_000913/3623553‑3623825
                                                                                                                                         |                                                                                                                                       
gAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGcc                                                                                                                                       >  2:156102/1‑140 (MQ=255)
gAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGcc                                                                                                                                       >  1:358154/1‑140 (MQ=255)
      tGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCAc                                                                                                                                 <  1:254156/140‑1 (MQ=255)
           aaaaaTAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGa                                                                                                                            <  1:334791/140‑1 (MQ=255)
            aaaaTAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGAc                                                                                                                           <  1:769648/140‑1 (MQ=255)
                tAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCaaa                                                                                                                       <  1:43304/140‑1 (MQ=255)
                 aaaGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAAt                                                                                                                      <  2:226511/140‑1 (MQ=255)
                       ataGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCtgg                                                                                                                >  2:778467/1‑140 (MQ=255)
                             ttGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGt                                                                                                          <  1:432566/140‑1 (MQ=255)
                               ggAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATGCGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGttt                                                                                                        >  2:762507/1‑140 (MQ=255)
                               ggAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGttt                                                                                                        >  1:609375/1‑140 (MQ=255)
                                gAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGtttt                                                                                                       <  2:394903/140‑1 (MQ=255)
                                     aGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTttatta                                                                                                  >  1:197889/1‑140 (MQ=255)
                                     aGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTttat                                                                                                    >  1:729363/1‑138 (MQ=255)
                                     aGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTttat                                                                                                    <  2:729363/138‑1 (MQ=255)
                                          agaTATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGaa                                                                                             >  2:433895/1‑140 (MQ=255)
                                          agaTATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGaa                                                                                             >  2:509411/1‑140 (MQ=255)
                                           gaTATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGaa                                                                                             >  2:442760/1‑139 (MQ=255)
                                           gaTATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGaa                                                                                             <  1:442760/139‑1 (MQ=255)
                                           gaTATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAAGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGaaa                                                                                            >  1:180299/1‑140 (MQ=255)
                                                atGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGc                                                                                       >  1:628219/1‑140 (MQ=255)
                                                 tGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCa                                                                                      <  2:583103/140‑1 (MQ=255)
                                                    tAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa                                                                                   >  2:27266/1‑140 (MQ=255)
                                                    tAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa                                                                                   >  1:62308/1‑140 (MQ=255)
                                                    tAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAAGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCaaaa                                                                                   <  2:180299/140‑1 (MQ=255)
                                                       gAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAatg                                                                                >  2:320684/1‑140 (MQ=255)
                                                        aaTCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAatga                                                                               <  1:263907/140‑1 (MQ=255)
                                                          tCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAatgatg                                                                             >  1:120578/1‑140 (MQ=255)
                                                           cGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATgg                                                                            >  1:454480/1‑140 (MQ=255)
                                                             ttATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          >  1:99603/1‑140 (MQ=255)
                                                             ttATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          <  2:454480/140‑1 (MQ=255)
                                                             ttATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          <  2:609375/140‑1 (MQ=255)
                                                             ttATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          >  1:13195/1‑140 (MQ=255)
                                                                       gATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          <  2:158625/130‑1 (MQ=255)
                                                                       gATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGga                                                                          >  1:158625/1‑130 (MQ=255)
                                                                       gATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGaa                                                                >  1:293121/1‑140 (MQ=255)
                                                                       gATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGaa                                                                >  1:448001/1‑140 (MQ=255)
                                                                         tGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAAtt                                                              <  1:156102/140‑1 (MQ=255)
                                                                         tGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAAtt                                                              >  2:116147/1‑140 (MQ=255)
                                                                            cGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTg                                                           >  1:608689/1‑140 (MQ=255)
                                                                            cGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTg                                                           >  1:439944/1‑140 (MQ=255)
                                                                            cGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGATTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTg                                                           >  1:227344/1‑140 (MQ=255)
                                                                              cAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGc                                                         <  1:141616/140‑1 (MQ=255)
                                                                                gaagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCa                                                       <  1:551118/140‑1 (MQ=255)
                                                                                gaagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCa                                                       <  1:181961/140‑1 (MQ=255)
                                                                                gaagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCa                                                       <  1:433895/140‑1 (MQ=255)
                                                                                gaagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCa                                                       <  2:68598/140‑1 (MQ=255)
                                                                                gaagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCa                                                       <  2:130181/140‑1 (MQ=255)
                                                                                 aagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAAtt                                                              <  2:242993/132‑1 (MQ=255)
                                                                                 aagaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAAtt                                                              >  1:242993/1‑132 (MQ=255)
                                                                                  agaagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACg                                                     <  1:320684/140‑1 (MQ=255)
                                                                                    aagaaAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGa                                                   <  2:439944/140‑1 (MQ=255)
                                                                                        aaaaCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAAt                                               <  2:99603/140‑1 (MQ=255)
                                                                                          aaCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATaa                                             <  1:509411/140‑1 (MQ=255)
                                                                                          aaCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATaa                                             <  2:628915/140‑1 (MQ=255)
                                                                                          aaCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATaa                                             <  2:628219/140‑1 (MQ=255)
                                                                                          aaCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATaa                                             <  2:608689/140‑1 (MQ=255)
                                                                                           aCCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAg                                            >  1:29105/1‑140 (MQ=255)
                                                                                              aTACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGc                                                         <  1:738353/124‑1 (MQ=255)
                                                                                              aTACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGc                                                         >  2:738353/1‑124 (MQ=255)
                                                                                              aTACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTAt                                         >  1:223968/1‑140 (MQ=255)
                                                                                               tACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATg                                        >  2:273203/1‑140 (MQ=255)
                                                                                                aCGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGt                                       <  2:690705/140‑1 (MQ=255)
                                                                                                 cGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTa                                      <  2:448001/140‑1 (MQ=255)
                                                                                                 cGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTa                                      <  2:293121/140‑1 (MQ=255)
                                                                                                   aaaTCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAg                                    <  2:223968/140‑1 (MQ=255)
                                                                                                   aaaTCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAg                                    <  2:62308/140‑1 (MQ=255)
                                                                                                    aaTCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATG‑TGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGa                                  <  2:572878/140‑1 (MQ=255)
                                                                                                     aTCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGa                                  <  2:29105/140‑1 (MQ=255)
                                                                                                     aTCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGa                                  <  1:116147/140‑1 (MQ=255)
                                                                                                                       aGTTGGGTTGTTGAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTgc                <  1:286632/140‑1 (MQ=255)
                                                                                                                              ttgttgAAGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATg         <  2:847550/140‑1 (MQ=255)
                                                                                                                                     aGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGGCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGt  <  1:762507/140‑1 (MQ=255)
                                                                                                                                     aGGTGCCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGt  <  2:13195/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                       
GAAATTTGGTTAAAAATAAAGCTATAGCATTGGAATTAGCTGAGATATATGTTAAGAATCGTTATGGACAGGATGCCGCAGAAGAAGAAAAACCATACGAAATCACTGAGTTAACAACAAGTTGGGTTGTTGAAGGTACCATTCACTCAGACCAAATTGCTGGTGGGGTTTTTATTATAGAAATAGGCAAAAATGATGGGAGAATTCTGAATTTTGGCCACGGAAAATAAGTATGTAAGGATAATCAAACATCGTGTGCGCTGATGGCAGAGT  >  NC_000913/3623553‑3623825

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A