Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F30 I1 R1
|
25 |
63.6 |
2147816 |
99.4% |
2134929 |
138.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,615,053 |
Δ1 bp |
coding (1387/1575 nt) |
nikA → |
Ni(2(+)) ABC transporter periplasmic binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,615,053 | 0 | A | . | 100.0%
| 321.0
/ NA
| 75 | coding (1387/1575 nt) | nikA | Ni(2(+)) ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (34/41); total (34/41) |
CCTGGGGCGCGCCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCGACCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCT > NC_000913/3614922‑3615185
|
ccTGGGGCGCGCCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACg < 1:352575/140‑1 (MQ=255)
cgcCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAAc > 2:346229/1‑140 (MQ=255)
cgcCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAAc > 1:781458/1‑140 (MQ=255)
cgcCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAAc > 2:1034703/1‑140 (MQ=255)
cgcCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAAc > 1:146537/1‑140 (MQ=255)
cATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTc < 2:75067/140‑1 (MQ=255)
cATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTc < 2:566251/140‑1 (MQ=255)
tatGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAg < 2:1030163/140‑1 (MQ=255)
atGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAgg < 1:1071253/140‑1 (MQ=255)
gATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcg < 2:85318/140‑1 (MQ=255)
gATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcg < 2:702910/140‑1 (MQ=255)
gATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcg < 1:272212/140‑1 (MQ=255)
ccACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTg > 2:82055/1‑140 (MQ=255)
acacGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcgc < 2:1026589/136‑1 (MQ=255)
acacGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcgc > 1:1026589/1‑136 (MQ=255)
acacGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTa > 2:337699/1‑140 (MQ=255)
acacGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTa > 2:268341/1‑140 (MQ=255)
acacGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTa > 1:131828/1‑140 (MQ=255)
acGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcg < 2:260429/133‑1 (MQ=255)
acGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGgcg > 1:260429/1‑133 (MQ=255)
acGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATc < 2:990039/140‑1 (MQ=255)
acGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATc > 1:990039/1‑140 (MQ=255)
acGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATc > 1:399338/1‑140 (MQ=255)
ccTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATcgcg < 1:637789/140‑1 (MQ=255)
ccTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATcgcg < 2:781458/140‑1 (MQ=255)
ccTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATcgcg < 1:337699/140‑1 (MQ=255)
cTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGa < 1:1034703/140‑1 (MQ=255)
ttCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGAc > 2:678436/1‑140 (MQ=255)
tCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACa > 1:198490/1‑140 (MQ=255)
tCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACa > 2:604069/1‑140 (MQ=255)
ccTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACAt > 2:710273/1‑140 (MQ=255)
cTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACAtt > 1:295396/1‑140 (MQ=255)
cAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCt < 2:399338/140‑1 (MQ=255)
gTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGa < 1:865551/140‑1 (MQ=255)
cAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGAccc < 1:604069/140‑1 (MQ=255)
aaTGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCg < 2:131828/140‑1 (MQ=255)
tGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGa > 2:271738/1‑134 (MQ=255)
tGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGa < 1:271738/134‑1 (MQ=255)
tGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTc > 2:564724/1‑140 (MQ=255)
cGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACg < 1:113474/140‑1 (MQ=255)
gTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGa < 2:295396/140‑1 (MQ=255)
cacaCGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAgg > 2:276579/1‑140 (MQ=255)
cacGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCg < 1:276579/140‑1 (MQ=255)
gCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGtt > 2:539382/1‑140 (MQ=255)
aCTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATc > 2:1028407/1‑140 (MQ=255)
aCTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATc > 2:411959/1‑140 (MQ=255)
cTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑TCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCt < 1:848710/140‑1 (MQ=255)
tCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGTGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGc < 1:82055/140‑1 (MQ=255)
tCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGc < 1:564724/140‑1 (MQ=255)
tCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGc < 2:146537/140‑1 (MQ=255)
cAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCt < 2:302640/140‑1 (MQ=255)
aGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTa < 1:1028407/140‑1 (MQ=255)
ggCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTAt < 1:539382/140‑1 (MQ=255)
caGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGt < 1:268341/140‑1 (MQ=255)
caGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGt < 1:678436/140‑1 (MQ=255)
aGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGtt > 2:241252/1‑140 (MQ=255)
aGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGtt < 1:346229/140‑1 (MQ=255)
aGCAAGGATTAGCCGACAAACCGCTGATTGACAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGtt > 1:567699/1‑140 (MQ=255)
gCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTa < 1:241252/140‑1 (MQ=255)
aTTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACAtctc > 2:651488/1‑140 (MQ=255)
aGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGGGGCGGTTTATCTGCCTa < 2:304108/124‑1 (MQ=255)
aGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGGGGCGGTTTATCTGCCTa > 1:304108/1‑124 (MQ=255)
aGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGt < 2:230417/129‑1 (MQ=255)
aGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAat > 2:884648/1‑140 (MQ=255)
aGCCGACAAACCGCTGATTGATAAAGACATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGt > 1:230417/1‑129 (MQ=255)
ccGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAatga > 2:480116/1‑140 (MQ=255)
aaaCCGCTGATTGACAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGAtggtg < 2:567699/140‑1 (MQ=255)
gCTGATTGATAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATc > 2:1038357/1‑140 (MQ=255)
gatAAAGAGATCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCg < 2:679865/140‑1 (MQ=255)
agaTCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTgg < 1:710273/140‑1 (MQ=255)
aTCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGt > 2:26595/1‑140 (MQ=255)
aTCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGt < 1:804129/140‑1 (MQ=255)
aTCGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGt < 2:148113/140‑1 (MQ=255)
cGGCGTAGTGCTGGCG‑CCCAAGAGGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTTGCTATCCGTTTCATCTAAATGAAGGGGGTATCTCAACCAGAGCGGGGTaa > 2:804129/1‑140 (MQ=255)
cGGCGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTaa > 2:654045/1‑140 (MQ=255)
cGAAGTGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACAt < 1:654045/140‑1 (MQ=255)
tGCTGGCG‑CCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCt > 2:870531/1‑140 (MQ=255)
|
CCTGGGGCGCGCCATATGATCCACACGCCTTCCTCAGTTCAATGCGCGTACCGTCACACGCTGACTTCCAGGCACAGCAAGGATTAGCCGACAAACCGCTGATTGATAAAGAGATCGGCGAAGTGCTGGCGACCCATGACGAAACGCAACGTCAGGCGCTGTATCGCGACATTCTGACCCGTCTGCATGACGAGGCGGTTTATCTGCCTATCAGTTACATCTCAATGATGGTGGTATCAAAACCGGAGCTGGGTAACATCCCCT > NC_000913/3614922‑3615185
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
