Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A23 F30 I1 R1
|
26 |
128.2 |
4334570 |
99.4% |
4308562 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,305,274 |
G→T |
H442N (CAT→AAT) |
yjcS ← |
alkyl sulfatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,305,274 | 0 | G | T | 99.0%
| 331.8
/ ‑3.1
| 95 | H442N (CAT→AAT) | yjcS | alkyl sulfatase |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (45/49); total (46/49) |
| Fisher's exact test for biased strand distribution p-value = 4.84e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.35e-01 |
AATCACCTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATGCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATGTCG > NC_000913/4305137‑4305407
|
aaTCACCTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCa > 1:1295965/1‑140 (MQ=255)
tCACCTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTTCCCATCTCCACCTGACCATACGGATTCAgg < 2:1585877/140‑1 (MQ=255)
ccTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTa < 2:2113081/140‑1 (MQ=255)
cTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAg < 1:986763/140‑1 (MQ=255)
tGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGc < 2:2112178/140‑1 (MQ=255)
cagcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGt < 2:154915/140‑1 (MQ=255)
cagcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGt < 2:706045/140‑1 (MQ=255)
gcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGtt < 1:1796615/130‑1 (MQ=255)
gcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGtt > 2:1796615/1‑130 (MQ=255)
gcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTa < 1:603431/140‑1 (MQ=255)
gcagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTa > 2:878434/1‑140 (MQ=255)
cagTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTAc < 1:1281394/140‑1 (MQ=255)
gTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcg < 2:1758604/140‑1 (MQ=255)
gTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcg < 2:1429628/140‑1 (MQ=255)
ttCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcgt > 1:1889862/1‑140 (MQ=255)
tCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcgtc > 2:332966/1‑140 (MQ=255)
tCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcgtc > 2:78015/1‑140 (MQ=255)
cTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACcgtcg > 2:931392/1‑140 (MQ=255)
cGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAAt < 1:1370408/140‑1 (MQ=255)
cGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAAt < 1:332966/140‑1 (MQ=255)
ccAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGc < 1:931392/140‑1 (MQ=255)
cAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGcc < 2:591782/140‑1 (MQ=255)
cAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGcc < 1:1182817/140‑1 (MQ=255)
aGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCa < 1:702585/140‑1 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGTGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGAt < 1:1014832/140‑1 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGc > 2:1706677/1‑134 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGc < 1:1706677/134‑1 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGAt < 1:2153878/140‑1 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGAt < 1:575366/140‑1 (MQ=255)
gTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGAt < 2:552774/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 2:348503/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:495493/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:526878/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:991624/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:878434/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:1905517/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 2:1226272/140‑1 (MQ=255)
aaTCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTACACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 2:1235257/140‑1 (MQ=255)
ccTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGtt > 2:559638/1‑140 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGc > 2:883283/1‑126 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGc < 1:883283/126‑1 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 1:147147/134‑1 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg > 2:147147/1‑134 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTta > 1:1595851/1‑140 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTta > 1:1095846/1‑140 (MQ=255)
cttgcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTta > 1:1404399/1‑140 (MQ=255)
gcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg < 2:1156341/131‑1 (MQ=255)
gcttgTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAg > 1:1156341/1‑131 (MQ=255)
ttcttGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCggg < 2:1095846/140‑1 (MQ=255)
gcgcCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTtg < 1:2097531/140‑1 (MQ=255)
gcgcCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTtg < 2:208322/140‑1 (MQ=255)
gcgcCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTtg > 1:545434/1‑140 (MQ=255)
gcgcCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTtg < 2:1404399/140‑1 (MQ=255)
aGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCgg < 2:115148/129‑1 (MQ=255)
aGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCgg > 1:115148/1‑129 (MQ=255)
gTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGa > 2:919986/1‑140 (MQ=255)
tgaCACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGaa > 1:13432/1‑140 (MQ=255)
tgaCACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGaa > 1:1971627/1‑140 (MQ=255)
acGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGt > 1:1771636/1‑140 (MQ=255)
acGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGt > 1:366353/1‑140 (MQ=255)
gggCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTaa > 2:1655386/1‑140 (MQ=255)
gggCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTaa > 1:372790/1‑140 (MQ=255)
gggCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTaa > 1:2091155/1‑140 (MQ=255)
ggCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAAt > 1:1164391/1‑140 (MQ=255)
aaCCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCcg > 2:922506/1‑140 (MQ=255)
ccGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCcgcg > 1:1874894/1‑140 (MQ=255)
cGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCgg < 1:559638/140‑1 (MQ=255)
gCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGc < 1:922506/140‑1 (MQ=255)
gCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGc < 1:1400037/140‑1 (MQ=255)
gCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGAGGCTGACAGAACCGTAATAGCCGCGGc < 1:78015/140‑1 (MQ=255)
cccAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCt > 1:2020226/1‑140 (MQ=255)
gcgcCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGcc < 1:919986/140‑1 (MQ=255)
cgcCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGccc > 2:1068596/1‑140 (MQ=255)
ccTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAg > 1:881395/1‑140 (MQ=255)
cACGTAACGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGTCAGAACCGTAATAGCCGCGGCTGGCCCAGTTAt > 1:1977848/1‑140 (MQ=255)
aCGTTTACCCATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCaa < 2:1889862/140‑1 (MQ=255)
tACCCATCTCCACCTGACCATACGGATGCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCa > 1:794257/1‑140 (MQ=255)
cATCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAggcg < 2:1164391/140‑1 (MQ=255)
aTCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAggcgg < 2:372790/140‑1 (MQ=255)
aTCTCCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAggcgg < 2:545434/140‑1 (MQ=255)
tcCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAg < 2:1874894/140‑1 (MQ=255)
tcCACCTGACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAg < 2:2020226/140‑1 (MQ=255)
gACCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATc > 2:1212692/1‑140 (MQ=255)
aCCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCa > 1:756821/1‑140 (MQ=255)
aCCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCa > 2:791039/1‑140 (MQ=255)
aCCATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCa > 2:1293761/1‑140 (MQ=255)
ccATCCGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCAt > 2:1337790/1‑140 (MQ=255)
ccATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCAt > 2:912992/1‑140 (MQ=255)
ccATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCAt > 2:359308/1‑140 (MQ=255)
cATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATg > 2:804620/1‑140 (MQ=255)
cATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATg > 2:1406445/1‑140 (MQ=255)
cATACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATg > 1:1405475/1‑140 (MQ=255)
tACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATGTc > 2:620831/1‑140 (MQ=255)
tACGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATGTc > 1:772290/1‑140 (MQ=255)
aCGGATTCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATGTCg > 1:818642/1‑140 (MQ=255)
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AATCACCTGTTTCAGCAGTTCTGCCGACCAGCGGTAATCACCTTGCTTGTTCGCTTCTTGCGCCAGGTTGATGACACGGGCAGAACCGCCCAGCGCCTGCACGTAACGTTTACCCATCTCCACCTGACCATACGGATGCAGGTTAGCCGGGTTACCGTCGTAATAGCCAAGATAGAAGTTATACACCGCGCGGGCGTTGTGGCTGACAGAACCGTAATAGCCGCGGCTGGCCCAGTTATTGGCAAGTGCAGGCGGCAGCTTAATCATGTCG > NC_000913/4305137‑4305407
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
