Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A32 F30 I1 R1	30	51.0	1723162	99.3%	1711099	139.1

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,898,944	G→T	R159R (CGA→AGA)	ygcU ←	putative FAD‑containing dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,898,944	0	G	T	100.0%	224.6 / NA	63	R159R (CGA→AGA)	ygcU	putative FAD‑containing dehydrogenase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (28/35); total (28/35)

TGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCGGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATTCTCA  >  NC_000913/2898808‑2899080

tgACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGt                                                                                                                                       >  2:579033/1‑140 (MQ=255)

tgACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGt                                                                                                                                       <  1:579033/140‑1 (MQ=255)

tgACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGt                                                                                                                                       <  1:569913/140‑1 (MQ=255)

tgACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGt                                                                                                                                       <  2:79137/140‑1 (MQ=255)

      aTGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTAc                                                                                                                                 >  2:285781/1‑140 (MQ=255)

          ccGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGTCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAgg                                                                                                                             >  2:775633/1‑140 (MQ=255)

          ccGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGTTACCAga                                                                                                                             <  2:771894/140‑2 (MQ=255)

                   ccGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATc                                                                                                                    >  1:105843/1‑140 (MQ=255)

                     gcgcgGCGTGGCACGTTTTTAATGCGTGTGACGGTGTCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTg                                                                                                                  <  1:775633/140‑1 (MQ=255)

                                        tAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGc                                                                                               <  1:145119/140‑1 (MQ=255)

                                         aaTGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCg                                                                                              <  1:739816/140‑1 (MQ=255)

                                           tGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGga                                                                                            <  1:285781/140‑1 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGa                                                                                                   <  2:713196/129‑1 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGa                                                                                                   >  1:713196/1‑129 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAAt                                                                                        >  2:328226/1‑140 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAAt                                                                                        >  2:209469/1‑140 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAAt                                                                                        >  2:379611/1‑140 (MQ=255)

                                               tgtgACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAAt                                                                                        <  2:441121/140‑1 (MQ=255)

                                                    cGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGcccc                                                                                   <  2:469423/140‑1 (MQ=255)

                                                    cGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGcccc                                                                                   <  1:727273/140‑1 (MQ=255)

                                                     ggTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCg                                                                                  <  2:237065/140‑1 (MQ=255)

                                                     ggTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCg                                                                                  <  1:408476/140‑1 (MQ=255)

                                                         ccATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCgtggt                                                                              <  2:604455/140‑1 (MQ=255)

                                                                   aTACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCtttt                                                                    >  1:796333/1‑140 (MQ=255)

                                                                        gCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACg                                                               >  1:172233/1‑140 (MQ=255)

                                                                         cTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGc                                                              >  1:456001/1‑140 (MQ=255)

                                                                          ttCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCa                                                             <  2:654204/140‑1 (MQ=255)

                                                                            ccAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAAc                                                           <  1:209469/140‑1 (MQ=255)

                                                                              aGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAAcgc                                                         >  2:841776/1‑140 (MQ=255)

                                                                                aCCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGt                                                       >  2:579783/1‑140 (MQ=255)

                                                                                   aaCGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGtttt                                                    >  2:518668/1‑140 (MQ=255)

                                                                                     cGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTcc                                                  <  1:328226/140‑1 (MQ=255)

                                                                                          atatCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCAc                                             >  2:650296/1‑140 (MQ=255)

                                                                                          atatCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCAc                                             >  1:462379/1‑140 (MQ=255)

                                                                                             tCTTCGATTGCGCGGTAGAGTGTGGAGAACTGCCCGATCCTTCTGGTTGCTCCCAGGCCGCCCATCTGCCCCAGCGGCTTTGCTTGCGGAGAATGCCCCGGGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTc                                          <  2:313719/140‑1 (MQ=255)

                                                                                             tCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTc                                          <  1:317414/140‑1 (MQ=255)

                                                                                                tCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAg                                       <  1:18603/140‑1 (MQ=255)

                                                                                                  gATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCg                                     <  1:711505/140‑1 (MQ=255)

                                                                                                  gATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCg                                     >  2:711505/1‑140 (MQ=255)

                                                                                                  gATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCg                                     <  1:359277/140‑1 (MQ=255)

                                                                                                  gATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCg                                     <  2:775640/140‑1 (MQ=255)

                                                                                                       cgcCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCTGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAaca                                >  1:735420/1‑140 (MQ=255)

                                                                                                       cgcCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAaca                                >  1:826564/1‑140 (MQ=255)

                                                                                                       cgcCGTAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAaca                                >  1:313719/1‑140 (MQ=255)

                                                                                                            tAGAGTGTGGAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACcaca                           >  2:45355/1‑140 (MQ=255)

                                                                                                                    ggAGAACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCg                   <  2:735420/140‑1 (MQ=255)

                                                                                                                     gagaACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGt                  <  1:518668/140‑1 (MQ=255)

                                                                                                                      agaACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTc                 >  1:377755/1‑140 (MQ=255)

                                                                                                                      agaACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGAGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTc                 >  1:205919/1‑140 (MQ=255)

                                                                                                                       gaACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCg                <  2:377755/140‑1 (MQ=255)

                                                                                                                       gaACTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCg                <  1:385247/140‑1 (MQ=255)

                                                                                                                         aCTGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGcc              >  2:542031/1‑140 (MQ=255)

                                                                                                                           tGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTg            >  2:89891/1‑140 (MQ=255)

                                                                                                                           tGCCCGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTg            >  1:83476/1‑140 (MQ=255)

                                                                                                                             cccGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCa          >  1:283279/1‑140 (MQ=255)

                                                                                                                               cGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCata        <  2:593341/140‑1 (MQ=255)

                                                                                                                               cGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCata        >  1:9931/1‑140 (MQ=255)

                                                                                                                               cGATACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCata        <  2:826564/140‑1 (MQ=255)

                                                                                                                                 aTACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATAtt      <  2:456001/140‑1 (MQ=255)

                                                                                                                                 aTACTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATAtt      <  1:841776/140‑1 (MQ=255)

                                                                                                                                   aCTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATtct    <  1:89891/140‑1 (MQ=255)

                                                                                                                                   aCTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATtct    <  2:796333/140‑1 (MQ=255)

                                                                                                                                    cTTCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATtctc   <  2:105843/140‑1 (MQ=255)

                                                                                                                                     ttCTGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATTCtca  <  2:283279/140‑1 (MQ=255)

TGACGAATGTCCGGGCCAGCCGCGCGGCGTGGCACGTTTTTAATGCGTGTGACGGTGCCATCAGCCAATACTGCTTCCAGACCAACGACCATATCTTCGATTGCGCCGTAGAGTGTGGAGAACTGCCCGATACTTCGGGTTGCTACCAGGCCGCCCATCTGCGCCAGCGGCTTTGACTGCGGAGAATGCCCCGTGGTGTAACCTTTTTCACGCAACGCGTTTTCCAGCACTTCCAGCGGAACACCACATTGCGCCGTCGCCTGCATATTCTCA  >  NC_000913/2898808‑2899080

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A