Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A42 F30 I1 R1
|
23 |
105.7 |
3586946 |
99.3% |
3561837 |
139.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,925,213 |
G→T |
Q141K (CAA→AAA) |
mnmG ← |
5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,925,213 | 0 | G | T | 98.4%
| 440.1
/ 0.1
| 126 | Q141K (CAA→AAA) | mnmG | 5‑carboxymethylaminomethyluridine‑tRNA synthase subunit MnmG |
| Reads supporting (aligned to +/- strand): ref base G (1/1); new base T (58/66); total (59/67) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.04e-01 |
Only 100 of 129 total aligned reads displayed.
CGGCGAGAAAGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTGGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCT > NC_000913/3925077‑3925346
|
cGGCGAGAAAGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGt > 2:893478/1‑140 (MQ=255)
gCGAGAAAGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTaa < 2:804498/140‑1 (MQ=255)
gCGAGAAAGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTaa < 2:326340/140‑1 (MQ=255)
aaaGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCa < 2:53358/140‑1 (MQ=255)
aGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCa < 1:1025193/138‑1 (MQ=255)
aGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCa > 2:1258293/1‑138 (MQ=255)
aGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCa > 2:1025193/1‑138 (MQ=255)
gCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCg > 1:668936/1‑140 (MQ=255)
cGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGa < 1:93895/140‑1 (MQ=255)
cGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGCAACAGCACCGa < 2:1239557/140‑1 (MQ=255)
ggAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGAc < 2:1686606/140‑1 (MQ=255)
aCGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGa < 1:1009696/140‑1 (MQ=255)
aCGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGa < 2:220939/140‑1 (MQ=255)
aCGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGa < 2:1090280/140‑1 (MQ=255)
gcggATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCg < 2:1473339/140‑1 (MQ=255)
cggATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGt < 1:1668394/140‑1 (MQ=255)
tCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTc < 2:1485151/140‑1 (MQ=255)
cACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCg > 2:1227605/1‑140 (MQ=255)
ccAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGAc < 1:893478/140‑1 (MQ=255)
gCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTGGGTAACAGCACCGACCACGCGATCGTTTTCGACAAt > 2:591888/1‑140 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 1:1496598/140‑1 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 2:248371/140‑1 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 2:190573/140‑1 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 2:667243/140‑1 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 2:607114/140‑1 (MQ=255)
cACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTGGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 1:591888/140‑1 (MQ=255)
cGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCGGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAg < 2:52841/140‑1 (MQ=255)
gCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGAt > 1:923069/1‑140 (MQ=255)
gCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGAt > 1:434052/1‑140 (MQ=255)
ccACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATa < 2:1031646/135‑1 (MQ=255)
ccACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATc > 2:133215/1‑140 (MQ=255)
ccACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATc > 2:1112141/1‑140 (MQ=255)
ccACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATc > 2:771305/1‑140 (MQ=255)
ccACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATc > 2:495791/1‑140 (MQ=255)
aCCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCtt > 1:77439/1‑140 (MQ=255)
tAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGc < 1:133215/140‑1 (MQ=255)
aTCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCctgct < 2:1367365/140‑1 (MQ=255)
aTCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCctgct > 1:1367365/1‑140 (MQ=255)
aTCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCctgct > 1:1647625/1‑140 (MQ=255)
aGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGaa < 2:587113/140‑1 (MQ=255)
gACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAg > 2:480471/1‑140 (MQ=255)
gACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAg > 1:1066644/1‑140 (MQ=255)
gACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAg > 2:1195051/1‑140 (MQ=255)
gACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAg > 1:1241081/1‑140 (MQ=255)
gACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAg > 1:1748572/1‑140 (MQ=255)
aCCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGa < 1:1622317/140‑1 (MQ=255)
aCCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGa > 2:1481292/1‑140 (MQ=255)
atatGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGatcat > 2:1291819/1‑140 (MQ=255)
tatGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGatcatc > 1:1199379/1‑140 (MQ=255)
tatGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGatcatc > 2:1605037/1‑140 (MQ=255)
tGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAg < 1:628096/140‑1 (MQ=255)
gAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAgg < 2:1460674/140‑1 (MQ=255)
aaTTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGt < 1:1195051/140‑1 (MQ=255)
tttACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCg < 1:10181/140‑1 (MQ=255)
tttACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCg < 1:415044/140‑1 (MQ=255)
tACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggt < 2:1647625/140‑1 (MQ=255)
tACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggt < 2:1357887/140‑1 (MQ=255)
tACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggt < 2:1729290/140‑1 (MQ=255)
tACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggt > 1:66167/1‑140 (MQ=255)
aCCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggtt > 1:1398723/1‑140 (MQ=255)
aCCGTCGAGGAACGTCCCAACGGCGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggtt > 1:782346/1‑140 (MQ=255)
cGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggttgg < 1:584649/140‑1 (MQ=255)
tCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCggttggtt > 1:343758/1‑140 (MQ=255)
tCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGCAAGATCATCAGGTTCggttggtt < 1:1481292/140‑1 (MQ=255)
gAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTtct > 1:604256/1‑140 (MQ=255)
ggAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTcc < 1:1291819/140‑1 (MQ=255)
aaCGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAg < 2:1629330/140‑1 (MQ=255)
tCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGcc > 1:1295724/1‑140 (MQ=255)
cccAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCcg < 2:1296786/140‑1 (MQ=255)
aCGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCcgtacg > 2:1104729/1‑140 (MQ=255)
cGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCcgtacgt > 2:240675/1‑140 (MQ=255)
tGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAgcg > 2:1296292/1‑129 (MQ=255)
tGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAgcg < 1:1296292/129‑1 (MQ=255)
gAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCg < 2:1066644/140‑1 (MQ=255)
aGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCg < 1:1707304/139‑1 (MQ=255)
aGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCg > 2:1707304/1‑139 (MQ=255)
aGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGc > 2:480171/1‑140 (MQ=255)
aGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGc > 1:161217/1‑140 (MQ=255)
aGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGc > 1:262813/1‑140 (MQ=255)
gCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGcc < 1:1605037/140‑1 (MQ=255)
gCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGcc < 1:595631/140‑1 (MQ=255)
cACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCt < 1:1004117/140‑1 (MQ=255)
cACGACGGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCt < 1:771305/140‑1 (MQ=255)
cgGCTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACgg < 2:257226/140‑1 (MQ=255)
cTTTGGCACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTag > 1:2224/1‑140 (MQ=255)
cACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGcaca < 1:1098324/140‑1 (MQ=255)
cACGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGcaca < 1:1227605/140‑1 (MQ=255)
cGGAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACg > 1:214628/1‑140 (MQ=255)
ggAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGa > 1:600700/1‑140 (MQ=255)
gaccTTAAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGAt < 1:524819/137‑1 (MQ=255)
gAACTTCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGAt < 1:1104729/140‑1 (MQ=255)
taaGTCCCATTTTGGTAACAGCACCGACCCCGCGATCGTTTTCGACAATAAGATCTTCACCCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGcc < 2:632947/138‑1 (MQ=255)
tCAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGcc < 2:262813/140‑1 (MQ=255)
cAGTCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCt > 2:135623/1‑140 (MQ=255)
tCCCATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAg < 1:135623/140‑1 (MQ=255)
ccATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGAt < 1:1702037/129‑1 (MQ=255)
ccATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGAt > 2:1702037/1‑129 (MQ=255)
ccATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCt > 1:784880/1‑140 (MQ=255)
ccATTTTGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCt > 1:1549857/1‑140 (MQ=255)
ttttGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGcc < 1:562007/131‑1 (MQ=255)
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CGGCGAGAAAGCGGAATGGACGGCGGATCACCAGCACGGCCACCGCTGTAATTATCCAGACCGATATGAATTTTACCGTCGAGGAACGTCCCAACGGTGAGCACGACGGCTTTGGCACGGAACTTCAGTCCCATTTGGGTAACAGCACCGACCACGCGATCGTTTTCGACAATAAGATCTTCAACCGCCTGCTGGAAGATCATCAGGTTCGGTTGGTTCTCCAGCGCCGTACGTACCGCCTGACGGTAGAGCACACGATCCGCCTGAGCT > NC_000913/3925077‑3925346
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
