Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A42 F60 I1 R1	18	77.5	2606276	98.8%	2575000	139.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,830,110	G→C	G389A (GGC→GCC)	xanP →	xanthine:H(+) symporter XanP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,830,110	0	G	C	100.0%	226.5 / NA	59	G389A (GGC→GCC)	xanP	xanthine:H(+) symporter XanP
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (38/21); total (38/21)

GACTGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAA  >  NC_000913/3829973‑3830246

gACTGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCa                                                                                                                                        >  1:1274616/1‑140 (MQ=255)

   tGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGccacca                                                                                                                                     >  1:854432/1‑140 (MQ=255)

   tGGTGTTGCCAGCCGCTATGTCGGATTTGTCCTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGCTTTGTACAACACATTCCAGAACCGGTTCTTGGCGGTGCAACGCTTGTAACGTTTGccacca                                                                                                                                     >  2:600915/1‑140 (MQ=255)

       gtTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATcgc                                                                                                                                 <  2:523094/140‑1 (MQ=255)

          gCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATcgccgc                                                                                                                              <  1:96404/140‑1 (MQ=255)

           ccAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCgccgcc                                                                                                                             >  2:379593/1‑140 (MQ=255)

           ccAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCgccgcc                                                                                                                             >  1:1236504/1‑140 (MQ=255)

               ccGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTccc                                                                                                                         >  2:1252024/1‑139 (MQ=255)

               ccGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCg                                                                                                                         >  1:774943/1‑140 (MQ=255)

               ccGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCg                                                                                                                         >  2:317457/1‑140 (MQ=255)

               ccGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTATAATGTTTGCCACCATCGCCGCCTCCg                                                                                                                         <  2:183653/140‑1 (MQ=255)

                cGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCgg                                                                                                                        <  2:1236504/140‑1 (MQ=255)

                                    cgcgCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTg                                                                                                    >  1:1241605/1‑140 (MQ=255)

                                         tGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCg                                                                                               <  1:573034/140‑1 (MQ=255)

                                                 aTCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCg                                                                                       >  1:272151/1‑140 (MQ=255)

                                                 aTCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCg                                                                                       >  2:620000/1‑140 (MQ=255)

                                                    gTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAGCCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCg                                                                                    <  1:952111/140‑1 (MQ=255)

                                                     tGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCgg                                                                                   >  2:594634/1‑140 (MQ=255)

                                                     tGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCgg                                                                                   >  1:959140/1‑140 (MQ=255)

                                                      gCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCggg                                                                                  <  2:272151/140‑1 (MQ=255)

                                                      gCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCggg                                                                                  <  2:928235/140‑1 (MQ=255)

                                                                ttCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGAt                                                                        >  1:352902/1‑140 (MQ=255)

                                                                     ggCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATcg                                                                   >  2:1132763/1‑140 (MQ=255)

                                                                          tGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTg                                                              >  2:1141997/1‑140 (MQ=255)

                                                                                    tGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCgg                                                    <  1:1132763/140‑1 (MQ=255)

                                                                                     gTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGATGGCGGt                                                   <  2:959140/140‑1 (MQ=255)

                                                                                          acacATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTc                                              <  1:1185229/140‑1 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGt                                                   >  1:444836/1‑134 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGt                                                   <  2:444836/134‑1 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCt                                             >  1:1009214/1‑140 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCt                                             >  2:300238/1‑140 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCt                                             >  1:309901/1‑140 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCt                                             >  2:790387/1‑140 (MQ=255)

                                                                                           cacaTTCCAGAACCGGTTCTGGGCGCCGCAACGCTTGTAATGTTTTCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCt                                             >  2:784550/1‑140 (MQ=255)

                                                                                              aTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTggg                                          >  2:60349/1‑140 (MQ=255)

                                                                                              aTTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTggg                                          >  1:191261/1‑140 (MQ=255)

                                                                                                  cAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGt                                               <  1:33059/131‑1 (MQ=255)

                                                                                                  cAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGt                                               >  2:33059/1‑131 (MQ=255)

                                                                                                     aaCCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTCGGTCTGGGCGTGtct                                   >  1:1095377/1‑140 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGtctc                                  >  2:103590/1‑136 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGtctc                                  <  1:103590/136‑1 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTcagca                              >  1:1231250/1‑140 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTcagca                              >  1:709887/1‑140 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTcagca                              >  1:1069295/1‑140 (MQ=255)

                                                                                                          gTTCTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTcagca                              >  2:1060432/1‑140 (MQ=255)

                                                                                                             cTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGcc                           <  2:352902/140‑1 (MQ=255)

                                                                                                             cTGGGCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGcc                           <  1:1112932/140‑1 (MQ=255)

                                                                                                               gggCGGCGCAACGCTTGTAATGTTTGCCACCATTGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGc                         >  1:831188/1‑140 (MQ=255)

                                                                                                               gggCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGc                         >  1:398904/1‑140 (MQ=255)

                                                                                                               gggCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGc                         >  1:355960/1‑140 (MQ=255)

                                                                                                               gggCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGc                         >  1:267795/1‑140 (MQ=255)

                                                                                                               gggCGGCGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTCGGTCTGGGCGTGTCTCAGCAGCCGc                         <  2:1095377/140‑1 (MQ=255)

                                                                                                                ggcggcGCAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCt                        >  2:685178/1‑140 (MQ=255)

                                                                                                                     cgcAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGAttt                   >  1:1285164/1‑140 (MQ=255)

                                                                                                                     cgcAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGAttt                   <  1:1141997/140‑1 (MQ=255)

                                                                                                                     cgcAACGCTTGTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGGGTCTCAGCAGCCGCTGGttt                   >  2:256681/1‑140 (MQ=255)

                                                                                                                               gTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGttttc         >  2:1269512/1‑138 (MQ=255)

                                                                                                                               gTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGc         >  1:308639/1‑140 (MQ=255)

                                                                                                                               gTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGc         <  2:1231250/140‑1 (MQ=255)

                                                                                                                               gTAATGTTTGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGc         <  2:398904/140‑1 (MQ=255)

                                                                                                                                     tttGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGa   >  1:8076/1‑140 (MQ=255)

                                                                                                                                      ttGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGaa  <  1:1060432/140‑1 (MQ=255)

                                                                                                                                      ttGCCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGaa  <  2:309901/140‑1 (MQ=255)

GACTGGTGTTGCCAGCCGCTATGTCGGTTTTGTCGTCGCGCTGATGTTGATCGTGCTGGGTCTGTTCCCGGCAGTGAGCGGTTTTGTACAACACATTCCAGAACCGGTTCTGGGCGGCGCAACGCTTGTAATGTTTGGCACCATCGCCGCCTCCGGTGTGCGTATCGTTTCTCGTGAGCCGCTGAACCGTCGGGCGATTCTGATTATCGCGCTGTCGCTGGCGGTTGGTCTGGGCGTGTCTCAGCAGCCGCTGATTTTGCAGTTTGCCCCTGAA  >  NC_000913/3829973‑3830246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A