Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A25 F60 I1 R1
|
18 |
83.0 |
2855326 |
99.1% |
2829628 |
139.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,634,326 |
G→T |
C177F (TGT→TTT) |
ytjC → |
putative phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,634,326 | 0 | G | T | 100.0%
| 250.8
/ NA
| 73 | C177F (TGT→TTT) | ytjC | putative phosphatase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (43/30); total (43/30) |
GGCACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAAT > NC_000913/4634189‑4634458
|
ggCACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACtttt > 1:305569/1‑140 (MQ=255)
cACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCt > 2:873903/1‑140 (MQ=255)
cACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCt > 2:1100542/1‑140 (MQ=255)
cACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGAATGGGCATAGCGCCGCTTACGGCTGCGTAACTTTTCt > 1:458703/1‑140 (MQ=255)
ggaTCTTGCCGGGAGTTAGCGCAGGGAAGCCGAGCGCTGCTGGTGAGTCATGGTGTTGCGCTGGGATGCCTGGGGAGTACGATTCTCGGATTAGGAGAATGGGGAGCGCGTTGCTTACGTCTACGTAACTTTTCTAgttg > 2:1426164/3‑139 (MQ=255)
cTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTcgcgc > 2:1229917/1‑140 (MQ=255)
ttGCCGGGGCTTACCGCAGGGAAGCCGACCGTTGCGGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTcgcgcg < 2:578086/140‑1 (MQ=255)
tGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGt < 1:258360/140‑1 (MQ=255)
ccGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTgg > 1:954194/1‑140 (MQ=255)
cGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGa < 1:1297928/140‑1 (MQ=255)
cGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGa < 1:98218/140‑1 (MQ=255)
aCTTACCGCAGGGAATCCGACCGCTACTGTTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAACATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTAt < 1:662471/140‑1 (MQ=255)
aCTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTAt < 1:873903/140‑1 (MQ=255)
aCCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAgg > 1:301459/1‑140 (MQ=255)
aCCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAgg > 1:905883/1‑140 (MQ=255)
ccGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGa < 1:1100542/140‑1 (MQ=255)
aGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCtgtg > 2:121938/1‑140 (MQ=255)
gACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGtggctg > 1:1413548/1‑140 (MQ=255)
gctgctGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGt < 2:305569/140‑1 (MQ=255)
tgctgGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTct < 2:996774/140‑1 (MQ=255)
tCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCg > 2:1173933/1‑140 (MQ=255)
aTGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGtt > 2:830361/1‑140 (MQ=255)
aTGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTACTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGtt > 1:1179181/1‑140 (MQ=255)
tGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTg > 2:780085/1‑140 (MQ=255)
ggTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGa < 2:734091/140‑1 (MQ=255)
ggTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCATACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGa < 2:155369/140‑1 (MQ=255)
gTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGaa > 2:510801/1‑140 (MQ=255)
tATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGaaa < 1:510801/140‑1 (MQ=255)
gCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGc > 1:1286301/1‑140 (MQ=255)
gCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGc > 2:138795/1‑140 (MQ=255)
cACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGGGGGTGGCTGCGTCGTTGAAACCGCa > 1:630655/1‑140 (MQ=255)
cACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCa > 2:951632/1‑140 (MQ=255)
tGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAggg < 1:729330/140‑1 (MQ=255)
tGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTAGCAGGAAAGCCTGAGGCGGGCGTCTGGCTGGGTCGTTGAAACCGCAggg > 2:499077/1‑140 (MQ=255)
tGGGATGCCTGGTGAGTACGATACTCGGATTCCCAACATTGGCAGAGCTCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAggg < 2:516026/140‑1 (MQ=255)
ggATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCTTCTGGCGGGGTCGTTGAAACCGCAGGGGa > 1:679107/1‑140 (MQ=255)
ggATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGa > 2:108078/1‑140 (MQ=255)
ggATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGa > 1:86536/1‑140 (MQ=255)
ggATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGa > 1:1311371/1‑140 (MQ=255)
ggATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGa > 1:167482/1‑140 (MQ=255)
ccgggTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtct > 2:907897/4‑140 (MQ=255)
ccTGGTGAGTACGATTCTCGGATTAGCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtct < 1:499077/140‑1 (MQ=255)
ccTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtct > 2:38556/1‑140 (MQ=255)
ccTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACAtct > 1:910740/1‑140 (MQ=255)
ggTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGc > 1:968829/1‑140 (MQ=255)
tGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTGTGGCTGGGTCGTTGGAACCGCAGGGGACATCTCGCAt > 1:416521/1‑140 (MQ=255)
tGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCAt > 1:1079937/1‑140 (MQ=255)
tGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCCTCTGGGTTGGTCGTTGCAACCCAAGGGGACATCTCGCAt > 2:648283/1‑140 (MQ=255)
aCGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGa > 2:1216672/1‑140 (MQ=255)
gATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGTGGACATCTCGCATCTGGACg < 2:905883/140‑1 (MQ=255)
tctcGGATTACCAGCTTGGGCACAGTGCCCCTTACGTATGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGccc < 1:399111/140‑1 (MQ=255)
tctcGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGacc < 2:910740/140‑1 (MQ=255)
tctcGGATTACCAGCAAGGGCACAGCGCCGCCTCCTTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCACGGGACATCTCGCATCTGGACGccc < 2:630655/140‑1 (MQ=255)
tctcGGATGACCAGCATGGGCACAGCGCCGCATGCTTCTGCGTAACTTGTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGccc < 2:631278/140‑1 (MQ=255)
tcccGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGccc < 2:954194/137‑1 (MQ=255)
ctcGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGcccc < 1:38556/140‑1 (MQ=255)
ggATTACCAGCATGGGCAGAGCGCCTCTTACGTCTGCTTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGc < 1:648283/140‑1 (MQ=255)
aCCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAg < 2:301459/140‑1 (MQ=255)
aCCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGCTCGTTGAAACCGGAGGAGACATCTCGCATCCCGACGCCCCTGCATTAg > 2:613910/1‑140 (MQ=255)
aTGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGTGACATCTCGCACCTCGACGCCTCTGCATTAGATGAGc > 1:649622/1‑140 (MQ=255)
tGGGCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCt > 2:1327081/1‑140 (MQ=255)
gggCAGAGCGCCGCTTATGTCTCCGTAACTTTTCTATTTGGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTg < 2:416521/140‑1 (MQ=255)
gggCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTg < 1:1229917/140‑1 (MQ=255)
ggCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGc > 1:339591/1‑140 (MQ=255)
ggCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACACCTCCCATCTGGACGCCCCTGCATTAGATGAGCTGc > 2:575636/1‑140 (MQ=255)
gCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCa < 2:1079937/140‑1 (MQ=255)
gCAGAGCGCCGCTTACGTCTGCGTAACTTTTCTACTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCa < 2:1179181/140‑1 (MQ=255)
gcgcCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg > 1:141150/1‑136 (MQ=255)
gcgcCGCTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAg < 2:141150/136‑1 (MQ=255)
cgcTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATGTGGACGCACCTACAATAGATGGGCTGCAGCGTTAacg > 1:393686/1‑140 (MQ=255)
cgcTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacg > 1:1197792/1‑140 (MQ=255)
cgcTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGATGCAGCGTTAacg > 1:990298/1‑140 (MQ=255)
cgcTTACGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGATGCAGCGTTAacg < 2:990298/140‑1 (MQ=255)
gcTTACGTCTGCGTAACGTTTCCATTTCGCGCGTGCATTTTCAGGAAACCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacga < 2:393686/140‑1 (MQ=255)
cTTACGTCTGCGTAACTTTTCTGTTTCGCGCTTGGGTTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAacgac < 2:458703/140‑1 (MQ=255)
aCGTCTGCGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGa > 2:883617/1‑140 (MQ=255)
cGTAACTTTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAAt > 1:989098/1‑140 (MQ=255)
|
GGCACTGGAATCTTGCCGGGACTTACCGCAGGGAAGCCGACCGCTGCTGGTGAGTCATGGTATTGCACTGGGATGCCTGGTGAGTACGATTCTCGGATTACCAGCATGGGCAGAGCGCCGCTTACGTCTGCGTAACTGTTCTATTTCGCGCGTGGATTATCAGGAAAGCCTGTGGCTGGCGTCTGGCTGGGTCGTTGAAACCGCAGGGGACATCTCGCATCTGGACGCCCCTGCATTAGATGAGCTGCAGCGTTAACGACGGATCGGAAT > NC_000913/4634189‑4634458
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
